Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003147_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:33766610:33769452:1 gene:Zm00001d003147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor isoform 4G-2
Sequence

ATGGAAGCTGGAATTACTACTGCTGATATATTGAAGGATGTTATATCTCTCATATTTGAG
AAGGCAGTTTTTGAGCCCACTTTCTGTCCAATGTATGCTCAACTTTGTTCTGATCTCAAT
GAAAAGCTTCCGACATTCCCTTCTGAAGAGCCAGGTGGCAAAGAGATCACATTCAAGCGC
GTGATATTGAACAATTGTCAGGAAGCCTTTGAAGGTGCTAGCAACTTAAGAGCTGAGATT
TCTAAATTAACTGGCCCTGACCAAGGGATGGAAAGAAGAGACAAAGAACGGTTGGTCAAA
CTTAGAACACTTGGAAATATTCGGCTAATTGGTGAGCTACTCAAGCAAAAAATGGTTCCT
GAGAAGATAGTTCATCACATTGTTATGGAGCTATTGGGGTCTGGGACTGATAAAAAACCA
TGCCCTGAAGAGGAAGATGTTGAGGCTATCTGTCATTTCTTCAATACGATTGGTAAACAG
CTTGACGAGAACACAAAGTCTCGGCGGATCAATGACACATACTTCATCCAGATGAAGGAG
CTAACAATGAATCCCCAGCTTGCACCACGTTTGAGGTTTATGGTTCGTGATGTGATTGAT
CTCCGGTCAAATAACTGGGTGCCTCGACGTGAGGAGATTAAGGCCAAGACAATCAGTGAA
ATTCACTCTGAGGCAGAAAAGAATCTTGGATTACGTCCTGGAGCAGCATCTGTCATTAGG
AATGGCCGTAGCTCACCAGGAGGGCCACTTTCACCTGGAGGGGGATTTCCAATGAATCGG
CCAGGAACTGGAGGCATGATGCCTGGGATGCCTGGTTCAAGAAAGATGCCTGGAATGCCT
GGTTTGGACAATGATAACTGGGAAGTTCCCCGTTCTAAATCAATGCCAAGAGGTGACTCG
ATTCGCAACCAGGGATTGTTGCTTAATAAACCATCAACAGTTCACAAGACATCATCTATT
AACACGAGGCTTCTTCCTCAAGGCAGTGGTGCGGCACTAATAGGCAAGAGTGCACTTTTG
GGAACCGGTGTCTCAGCATCTCGTCCTCTCAGCTTTACGCCTGGGCCCACACCAGCTCAA
ACTACACCAAAACCAATACGTGCAGCACCAGCTGTTGTCCCTGCTCCTGATAAACAGGCC
AGTGCTCCCAAGGGGAACACTGCTGAGCTTCAGAAGAAAACAATAGCTCTTCTTGAGGAG
TATTTTGGCATACGTATTTTAGATGAAGCCCATCAATGTATCGTGGAGCTGCAGAGTCCT
GATTACTACCCAGAAATTGTTAAAGAAGCTGTCAATCTTGCCCTAGATAAAGGCACCAAT
TTTGTTGATCCTCTTGTTAGGCTACTGGAGCATTTGTACACAAAGAAAATTTTCAAGACT
CAAGACCTGGAATCCGGTTGCTTGTTATATGGTACTCTGCTGGATGACATTGGCATTGAC
CTTCCTAAAGCTCCAGCACAATTTGGTGAGATCATTGCTCGCCTGACTTTGTTGGGTGCC
TTGAGATTTGAAGCTCTGGAGGTTATTTTAAAGAAAATGGAGGATACCTACAACCGCAAA
GCAGTTTCTAATGCTTTCATGAAAACCTTGGAAGCAAACCCATCAGGTCAGGCTATCTTA
GGCTCACCTGCTGCTGCTGCAGTAATAGACGCTTGCAACAGCCTTTTGGAATAA

Peptide Sequence

PEP ID

Zm00001d003147_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:33766610:33769452:1 gene:Zm00001d003147 transcript:Zm00001d003147_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor isoform 4G-2
Sequence

MEAGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSDLNEKLPTFPSEEPGGKEITFKR
VILNNCQEAFEGASNLRAEISKLTGPDQGMERRDKERLVKLRTLGNIRLIGELLKQKMVP
EKIVHHIVMELLGSGTDKKPCPEEEDVEAICHFFNTIGKQLDENTKSRRINDTYFIQMKE
LTMNPQLAPRLRFMVRDVIDLRSNNWVPRREEIKAKTISEIHSEAEKNLGLRPGAASVIR
NGRSSPGGPLSPGGGFPMNRPGTGGMMPGMPGSRKMPGMPGLDNDNWEVPRSKSMPRGDS
IRNQGLLLNKPSTVHKTSSINTRLLPQGSGAALIGKSALLGTGVSASRPLSFTPGPTPAQ
TTPKPIRAAPAVVPAPDKQASAPKGNTAELQKKTIALLEEYFGIRILDEAHQCIVELQSP
DYYPEIVKEAVNLALDKGTNFVDPLVRLLEHLYTKKIFKTQDLESGCLLYGTLLDDIGID
LPKAPAQFGEIIARLTLLGALRFEALEVILKKMEDTYNRKAVSNAFMKTLEANPSGQAIL
GSPAAAAVIDACNSLLE

Transcript Sequence

Transcript ID

Zm00001d003147_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:33766610:33769452:1 gene:Zm00001d003147 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor isoform 4G-2
Sequence

AAGAGCAAGCTAACAGGCAAGATCAGTTAAGCTCCCAGTTTGCTTCGAAAGCTCAGGCTG
AAGTGCCCTGGTCAGCCCGAAGAGGCAATCTCTCGGAGAAAGAAAGAGTCTTGAAAACGG
TGAAAGGTATACTGAACAAACTTACACCAGAGAAATTCGATCTTTTAAAGGGTCAACTAA
TGGAAGCTGGAATTACTACTGCTGATATATTGAAGGATGTTATATCTCTCATATTTGAGA
AGGCAGTTTTTGAGCCCACTTTCTGTCCAATGTATGCTCAACTTTGTTCTGATCTCAATG
AAAAGCTTCCGACATTCCCTTCTGAAGAGCCAGGTGGCAAAGAGATCACATTCAAGCGCG
TGATATTGAACAATTGTCAGGAAGCCTTTGAAGGTGCTAGCAACTTAAGAGCTGAGATTT
CTAAATTAACTGGCCCTGACCAAGGGATGGAAAGAAGAGACAAAGAACGGTTGGTCAAAC
TTAGAACACTTGGAAATATTCGGCTAATTGGTGAGCTACTCAAGCAAAAAATGGTTCCTG
AGAAGATAGTTCATCACATTGTTATGGAGCTATTGGGGTCTGGGACTGATAAAAAACCAT
GCCCTGAAGAGGAAGATGTTGAGGCTATCTGTCATTTCTTCAATACGATTGGTAAACAGC
TTGACGAGAACACAAAGTCTCGGCGGATCAATGACACATACTTCATCCAGATGAAGGAGC
TAACAATGAATCCCCAGCTTGCACCACGTTTGAGGTTTATGGTTCGTGATGTGATTGATC
TCCGGTCAAATAACTGGGTGCCTCGACGTGAGGAGATTAAGGCCAAGACAATCAGTGAAA
TTCACTCTGAGGCAGAAAAGAATCTTGGATTACGTCCTGGAGCAGCATCTGTCATTAGGA
ATGGCCGTAGCTCACCAGGAGGGCCACTTTCACCTGGAGGGGGATTTCCAATGAATCGGC
CAGGAACTGGAGGCATGATGCCTGGGATGCCTGGTTCAAGAAAGATGCCTGGAATGCCTG
GTTTGGACAATGATAACTGGGAAGTTCCCCGTTCTAAATCAATGCCAAGAGGTGACTCGA
TTCGCAACCAGGGATTGTTGCTTAATAAACCATCAACAGTTCACAAGACATCATCTATTA
ACACGAGGCTTCTTCCTCAAGGCAGTGGTGCGGCACTAATAGGCAAGAGTGCACTTTTGG
GAACCGGTGTCTCAGCATCTCGTCCTCTCAGCTTTACGCCTGGGCCCACACCAGCTCAAA
CTACACCAAAACCAATACGTGCAGCACCAGCTGTTGTCCCTGCTCCTGATAAACAGGCCA
GTGCTCCCAAGGGGAACACTGCTGAGCTTCAGAAGAAAACAATAGCTCTTCTTGAGGAGT
ATTTTGGCATACGTATTTTAGATGAAGCCCATCAATGTATCGTGGAGCTGCAGAGTCCTG
ATTACTACCCAGAAATTGTTAAAGAAGCTGTCAATCTTGCCCTAGATAAAGGCACCAATT
TTGTTGATCCTCTTGTTAGGCTACTGGAGCATTTGTACACAAAGAAAATTTTCAAGACTC
AAGACCTGGAATCCGGTTGCTTGTTATATGGTACTCTGCTGGATGACATTGGCATTGACC
TTCCTAAAGCTCCAGCACAATTTGGTGAGATCATTGCTCGCCTGACTTTGTTGGGTGCCT
TGAGATTTGAAGCTCTGGAGGTTATTTTAAAGAAAATGGAGGATACCTACAACCGCAAAG
CAGTTTCTAATGCTTTCATGAAAACCTTGGAAGCAAACCCATCAGGTCAGGCTATCTTAG
GCTCACCTGCTGCTGCTGCAGTAATAGACGCTTGCAACAGCCTTTTGGAATAATCTTCCT
AGCAGCTTTGGCCTATCAACCTTTTCAGATTCTGTATCTTGCGAAAGACGGTCTCGTGTA
CTCTCTATAGTTTAGGTGTCAAGGAATTGAGGAACAGA