Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d003144_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:33547653:33549573:-1 gene:Zm00001d003144 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 CYP71C36

Sequence

ATGGAGAACCTGGCAGGGCAGCAGTTCGTTTATGAGGTGACGAGTCTACGAGCATTGTTT
CTGCTGCTGCTCCTCTCTCCCTTCCTCTTCCTCATCATGCGCAACGCGCGAGCAACAACA
CTAATGTTCGATACCAAGAGGACAAGGGGCCACCGGCAGCCTGCAGATCGGCAGCAGAGC
CTCCCGCCGTCGCCTCCGGCAGTGCCTGTCCTCGGCCACCTGCACCTCGTCGGCTCTCTC
CCGCACGTCTCCCTCCGCAGCCTCGCCAGGACGCTTGGCGCGGACCTCATGCTGCTCCGC
CTGGGCTCCACGCCGGTGCTGGTCGTGTCGTCGTCCAGCGCCGCCGAGGCCGTGCTGCGC
ACGCACGACCACGTGTTCGCGTCGCGGCCGCACGCCCTGGTCTCCGAGGTCGTCCTGTAC
GGTCCGTCCGACGTCGGGTTCGCGCCGCACGGCGACTGCTGGCGGCGGGGGCGGAAGCTC
ATCACCACGCACCTTCTCAGCGTCAACAGGGTGCAGTCGTTCCGCCACGCCCGGGAAGAA
GAGGTGAGCGTGGTGATGGGCCGGATCGCCGAGGCGGCGGCCGCTGGTGCGGCGGTGGAC
GTGGGCGAGCTGCTCGGCTCGTTCACGAACGACCTAGCGTGCCGCGCCGTGATGGGCAAG
TCCTTCCGGAGCGAGGGTCGCAACAAGCTGTTCCGGGAGCTTGTCCTCGACACCACCAAG
CTGCTGGTCGGCTTCAACGTCGAGGACTTCTTCCCCTTCCTGGCTCGCTTCGGCGTGCTC
AGCAAGCTGGTCCGCGCCAAGTCCGAGAGACTGAGGAGGAGGTGGGACGAGCTACTCGAT
AGGCTGATCGAGGATCGTGAGAGCAAGTATGAGGCGGCGGCGGCGAGTGATCTCAAGGAC
GATGATGACGATAACTTCATACATGTCTTGCTCTCCGTTCGACAGGAGTACGGCCATATT
ACGAGGGAGCAAATGAAAGCTCTCCTGCAGGACGTGTTTATCGGGGGGATAGACTCCACA
TCTTCGCTGCTCGAGTTCACCATGGCTGAGCTCATGCGGAAACCACGAGTGATGAACAAG
CTCCAAGCCGAGGTAAGGAGCAGCACGCCCGAGGGGCATGATGGAGTCGTCGGCGAAGAC
AGCCTGGAGCACATGGCCTACCTGAGGGCCGTCACAAAAGAGTCCCTCCGGATCCATAAC
GTGACGCCGCTCCTGGCCCCGCACCTGTCCATGGATAGCTGCACCATCGATGGCTACACG
GTCCCCGTCGGGGTGCAGGTCCTGATCAACTCTTGGGCCATCGGCAGGGACACGCGCTAC
TGGGGCGACGATGCTGAGGAGTTCGTCCCTGAGAGGTTCATGGATGGCGGCAGCGCCGTT
CATGTCAGCTTCAAGGGGAGTGACTTCGAGTTCCTGCCATTCGGGTCTGGACGAAGGATG
TGCGCCGGGGTGAACTTCGCGATGGCCACGGTAGAGCTAATGTTGGCGAACCTCGTGCAT
CGTTTTGACTGGGATTTACCACCGGGGCAGGAGGGTCGCGACATTGATGTGTCGCAGGTG
TTCGGACTAGTAGTCCGCCGGAAAAAGAAACTTCTCTTGGTTCCAAAATTACGTGTATAC
TAG

Peptide Sequence

PEP ID

Zm00001d003144_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:33547653:33549573:-1 gene:Zm00001d003144 transcript:Zm00001d003144_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 CYP71C36

Sequence

MENLAGQQFVYEVTSLRALFLLLLLSPFLFLIMRNARATTLMFDTKRTRGHRQPADRQQS
LPPSPPAVPVLGHLHLVGSLPHVSLRSLARTLGADLMLLRLGSTPVLVVSSSSAAEAVLR
THDHVFASRPHALVSEVVLYGPSDVGFAPHGDCWRRGRKLITTHLLSVNRVQSFRHAREE
EVSVVMGRIAEAAAAGAAVDVGELLGSFTNDLACRAVMGKSFRSEGRNKLFRELVLDTTK
LLVGFNVEDFFPFLARFGVLSKLVRAKSERLRRRWDELLDRLIEDRESKYEAAAASDLKD
DDDDNFIHVLLSVRQEYGHITREQMKALLQDVFIGGIDSTSSLLEFTMAELMRKPRVMNK
LQAEVRSSTPEGHDGVVGEDSLEHMAYLRAVTKESLRIHNVTPLLAPHLSMDSCTIDGYT
VPVGVQVLINSWAIGRDTRYWGDDAEEFVPERFMDGGSAVHVSFKGSDFEFLPFGSGRRM
CAGVNFAMATVELMLANLVHRFDWDLPPGQEGRDIDVSQVFGLVVRRKKKLLLVPKLRVY

Transcript Sequence

Transcript ID

Zm00001d003144_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:33547653:33549573:-1 gene:Zm00001d003144 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 CYP71C36

Sequence

AAACCGGAGCGGCGGCACCATTTCGTTACCATGGAGAACCTGGCAGGGCAGCAGTTCGTT
TATGAGGTGACGAGTCTACGAGCATTGTTTCTGCTGCTGCTCCTCTCTCCCTTCCTCTTC
CTCATCATGCGCAACGCGCGAGCAACAACACTAATGTTCGATACCAAGAGGACAAGGGGC
CACCGGCAGCCTGCAGATCGGCAGCAGAGCCTCCCGCCGTCGCCTCCGGCAGTGCCTGTC
CTCGGCCACCTGCACCTCGTCGGCTCTCTCCCGCACGTCTCCCTCCGCAGCCTCGCCAGG
ACGCTTGGCGCGGACCTCATGCTGCTCCGCCTGGGCTCCACGCCGGTGCTGGTCGTGTCG
TCGTCCAGCGCCGCCGAGGCCGTGCTGCGCACGCACGACCACGTGTTCGCGTCGCGGCCG
CACGCCCTGGTCTCCGAGGTCGTCCTGTACGGTCCGTCCGACGTCGGGTTCGCGCCGCAC
GGCGACTGCTGGCGGCGGGGGCGGAAGCTCATCACCACGCACCTTCTCAGCGTCAACAGG
GTGCAGTCGTTCCGCCACGCCCGGGAAGAAGAGGTGAGCGTGGTGATGGGCCGGATCGCC
GAGGCGGCGGCCGCTGGTGCGGCGGTGGACGTGGGCGAGCTGCTCGGCTCGTTCACGAAC
GACCTAGCGTGCCGCGCCGTGATGGGCAAGTCCTTCCGGAGCGAGGGTCGCAACAAGCTG
TTCCGGGAGCTTGTCCTCGACACCACCAAGCTGCTGGTCGGCTTCAACGTCGAGGACTTC
TTCCCCTTCCTGGCTCGCTTCGGCGTGCTCAGCAAGCTGGTCCGCGCCAAGTCCGAGAGA
CTGAGGAGGAGGTGGGACGAGCTACTCGATAGGCTGATCGAGGATCGTGAGAGCAAGTAT
GAGGCGGCGGCGGCGAGTGATCTCAAGGACGATGATGACGATAACTTCATACATGTCTTG
CTCTCCGTTCGACAGGAGTACGGCCATATTACGAGGGAGCAAATGAAAGCTCTCCTGCAG
GACGTGTTTATCGGGGGGATAGACTCCACATCTTCGCTGCTCGAGTTCACCATGGCTGAG
CTCATGCGGAAACCACGAGTGATGAACAAGCTCCAAGCCGAGGTAAGGAGCAGCACGCCC
GAGGGGCATGATGGAGTCGTCGGCGAAGACAGCCTGGAGCACATGGCCTACCTGAGGGCC
GTCACAAAAGAGTCCCTCCGGATCCATAACGTGACGCCGCTCCTGGCCCCGCACCTGTCC
ATGGATAGCTGCACCATCGATGGCTACACGGTCCCCGTCGGGGTGCAGGTCCTGATCAAC
TCTTGGGCCATCGGCAGGGACACGCGCTACTGGGGCGACGATGCTGAGGAGTTCGTCCCT
GAGAGGTTCATGGATGGCGGCAGCGCCGTTCATGTCAGCTTCAAGGGGAGTGACTTCGAG
TTCCTGCCATTCGGGTCTGGACGAAGGATGTGCGCCGGGGTGAACTTCGCGATGGCCACG
GTAGAGCTAATGTTGGCGAACCTCGTGCATCGTTTTGACTGGGATTTACCACCGGGGCAG
GAGGGTCGCGACATTGATGTGTCGCAGGTGTTCGGACTAGTAGTCCGCCGGAAAAAGAAA
CTTCTCTTGGTTCCAAAATTACGTGTATACTAGCATCCCCCTCCCCGCACCCAAGATATA
CTGGGCTGTTGCATATATGTATGTACTGCAATAAAGGTTGCCTATATGTAAGCTTACGAC
ATTACTTGTACTGGGTATATGATGCAATAATGTTATTAGAAATTTAAGTACA