Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003050_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:30386679:30388610:-1 gene:Zm00001d003050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGTCCGTTTCCGAGGCCGCTTATCCACCGCCGCCCCCGTCCTCATGGGCACAACAGATC CGCGCGGCCGCTGCCGAGGGCCACTTCTGCGACGCTGTCTCCCTCTTCCTCCGGATGCGC GCCTCCGCCGCGCCACGCTCGTCTGTCCCGGCCTCACTCCCGGCCGCGCTCAAGTCCTGT GCCGCCCTAGGCCTGAGCGCCCTCGGCGCCTCCCTCCATGCGCTGGCCATCCGCTCCGGT GCATTCGCCGACCGTTTTACCGCCAATGCCCTCCTCAACCTCTACTGCAAGGTCCCGTGT TCGTATCTCGACTCCACTGGTGTGGCCATAGTGGATGTACCCGGATCATCAACCGCATTT GAGAGCGTGCGGAAGGTGTTCGACGAAATGATCGAGAGGGACGTGGTGTCCTGGAACACT TTGGTGCTGGGCTGCGCGGAGGAAGGGAGGCACCATGAAGCACTGGGGTTTGTCAGGAAG ATGTGCAGGGAAGGGTTTAGGCCTGACTCGTTCACCTTATCCACTGTGCTCCCAATCTTC GCGGAGTGTGCTGATGTCAAGAGAGGCTTGGAGGTGCATGGTTTTGCCTTCAGGAATGGG TTTGATAGCGATGTGTTCGTTGGCAGTAGCCTGATCGATATGTATGCGAATTGTACAAGG ACGGATTATTCTGTCAAAGTGTTTGACAACCTCCCGGTACGAGACCATATTCTGTGGAAC TCCCTGCTTGCAGGTTGTGCACAAAATGGTTCAGTTGAGGAGGCCCTTGGAATATTCCGT CGGATGCTGCAGGCTGGTGTTAGACCTGTGCCCGTGACTTTCTCGAGCCTCATACCTGTC TGTGGTAATTTGGCATCATTGCGCTTCGGGAAGCAGCTGCACGCCTATGTGATCTGTGGT GGGTTTGAAGATAACGTGTTTATATCTAGCTCCCTGATTGACATGTACTGCAAATGTGGG GAGATTAGCATTGCCCATTGCATATTTGACAAGATGAGTTCACCAGACGTTGTATCGTGG ACTGCGATGATCATGGGGTATGCATTGCATGGTCCAGCAAGAGAGGCACTTGTGCTGTTT GAGAGAATGGAACTGGGAAATGCAAAGCCTAACCATATCACCTTTCTTGCGGTTCTGACT GCATGTAGTCATGCTGGCTTAGTGGATAAGGGCTGGAAATATTTCAAGAGTATGTCAAAT CATTATGGAATTGTTCCTACTCTAGAGCATTTTGCAGCGCTTGCTGACACCCTTGGTCGT GCAGGAGAGTTAGACGAAGCATATAATTTTATATCGAAGATGCAAATAAAACCAACTGCG AGTGTCTGGTCCACATTGTTAAGGGCTTGCAGGGTCCATAAAAATACCATGTTAGCTGAG GAAGTAGCCAAGAAAATAATGGAGCTTGAACCTAGGAGCATTGGGTCTCATGTAGTATTG TCAAATATGTATTCAGCTTCTGGGAGATGGAATGAAGCAGCACACCTACGAGAATCCATG AGAAAAAAGGGTATGAAGAAGGATCCAGCTTGTAGTTGGATTGAAGTGAAGAGCAAACTG CATGTCTTTGTAGCTCATGATAGGTCCCACCCTTGGTATGACAGGATTATTGATGCACTG AATGCTTTCTCAGAGCAGATGGCACGCGAAGGTCATGTACCCAATACAGAGGATGTTTTC CAGGATATTGAAGAAGAGCACAAGTCATATGTGTTATGTGGTCACAGTGAGAAACTTGCT ATAGTGTTTGGTATTATAAGCACGCCTGCTGGAACAAAAATTCGTGTGATGAAGAATCTC CGAGTCTGTATTGATTGCCACACAGTAACTAAATTTATTTCAAAGTTAGCTGATAGGGAG ATTGTGGTGCGTGATGCAAACCGTTTCCACCACTTTAAGGATGGAAACTGTTCCTGCGGG GACTTTTGGTGA

Peptide Sequence

PEP ID	Zm00001d003050_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:30386679:30388610:-1 gene:Zm00001d003050 transcript:Zm00001d003050_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MSVSEAAYPPPPPSSWAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSC AALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAF ESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIF AECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWN SLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICG GFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLF ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGR AGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVL SNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDAL NAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNL RVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW

Transcript Sequence

Transcript ID	Zm00001d003050_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:30386679:30388610:-1 gene:Zm00001d003050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGTCCGTTTCCGAGGCCGCTTATCCACCGCCGCCCCCGTCCTCATGGGCACAACAGATC CGCGCGGCCGCTGCCGAGGGCCACTTCTGCGACGCTGTCTCCCTCTTCCTCCGGATGCGC GCCTCCGCCGCGCCACGCTCGTCTGTCCCGGCCTCACTCCCGGCCGCGCTCAAGTCCTGT GCCGCCCTAGGCCTGAGCGCCCTCGGCGCCTCCCTCCATGCGCTGGCCATCCGCTCCGGT GCATTCGCCGACCGTTTTACCGCCAATGCCCTCCTCAACCTCTACTGCAAGGTCCCGTGT TCGTATCTCGACTCCACTGGTGTGGCCATAGTGGATGTACCCGGATCATCAACCGCATTT GAGAGCGTGCGGAAGGTGTTCGACGAAATGATCGAGAGGGACGTGGTGTCCTGGAACACT TTGGTGCTGGGCTGCGCGGAGGAAGGGAGGCACCATGAAGCACTGGGGTTTGTCAGGAAG ATGTGCAGGGAAGGGTTTAGGCCTGACTCGTTCACCTTATCCACTGTGCTCCCAATCTTC GCGGAGTGTGCTGATGTCAAGAGAGGCTTGGAGGTGCATGGTTTTGCCTTCAGGAATGGG TTTGATAGCGATGTGTTCGTTGGCAGTAGCCTGATCGATATGTATGCGAATTGTACAAGG ACGGATTATTCTGTCAAAGTGTTTGACAACCTCCCGGTACGAGACCATATTCTGTGGAAC TCCCTGCTTGCAGGTTGTGCACAAAATGGTTCAGTTGAGGAGGCCCTTGGAATATTCCGT CGGATGCTGCAGGCTGGTGTTAGACCTGTGCCCGTGACTTTCTCGAGCCTCATACCTGTC TGTGGTAATTTGGCATCATTGCGCTTCGGGAAGCAGCTGCACGCCTATGTGATCTGTGGT GGGTTTGAAGATAACGTGTTTATATCTAGCTCCCTGATTGACATGTACTGCAAATGTGGG GAGATTAGCATTGCCCATTGCATATTTGACAAGATGAGTTCACCAGACGTTGTATCGTGG ACTGCGATGATCATGGGGTATGCATTGCATGGTCCAGCAAGAGAGGCACTTGTGCTGTTT GAGAGAATGGAACTGGGAAATGCAAAGCCTAACCATATCACCTTTCTTGCGGTTCTGACT GCATGTAGTCATGCTGGCTTAGTGGATAAGGGCTGGAAATATTTCAAGAGTATGTCAAAT CATTATGGAATTGTTCCTACTCTAGAGCATTTTGCAGCGCTTGCTGACACCCTTGGTCGT GCAGGAGAGTTAGACGAAGCATATAATTTTATATCGAAGATGCAAATAAAACCAACTGCG AGTGTCTGGTCCACATTGTTAAGGGCTTGCAGGGTCCATAAAAATACCATGTTAGCTGAG GAAGTAGCCAAGAAAATAATGGAGCTTGAACCTAGGAGCATTGGGTCTCATGTAGTATTG TCAAATATGTATTCAGCTTCTGGGAGATGGAATGAAGCAGCACACCTACGAGAATCCATG AGAAAAAAGGGTATGAAGAAGGATCCAGCTTGTAGTTGGATTGAAGTGAAGAGCAAACTG CATGTCTTTGTAGCTCATGATAGGTCCCACCCTTGGTATGACAGGATTATTGATGCACTG AATGCTTTCTCAGAGCAGATGGCACGCGAAGGTCATGTACCCAATACAGAGGATGTTTTC CAGGATATTGAAGAAGAGCACAAGTCATATGTGTTATGTGGTCACAGTGAGAAACTTGCT ATAGTGTTTGGTATTATAAGCACGCCTGCTGGAACAAAAATTCGTGTGATGAAGAATCTC CGAGTCTGTATTGATTGCCACACAGTAACTAAATTTATTTCAAAGTTAGCTGATAGGGAG ATTGTGGTGCGTGATGCAAACCGTTTCCACCACTTTAAGGATGGAAACTGTTCCTGCGGG GACTTTTGGTGA