Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003048_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:30338613:30343062:-1 gene:Zm00001d003048 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disease resistance gene analog PIC17
Sequence	ATGACTTTTCAAGCCGCAAGCCCACCGAACAACGTGCGCGCGGACGTTTTCTTGGCAAGG CCCGAATCCTTCCAATCCAATCCCCATCCGGGCAACCGTCTGCCGTGTTGCCCCATTCCT GCCATGCACCGCGTGGCGCCTAGCCTCCGCATATGCTTCCTTTATAAGCTTCAAACAACA ACTCCCTTTTGCAGATTCCTCGTTCGCCTGCTGCACGCTCACCACTGTACGTCCCCGATG GCTGAAGCCATCAGCGCGACCAGCTCGTGCCTGGAACCCCTGTGCGGTTGTCTGGAAAGC ACAGGCGTGTTCGAGGCAGTGGGCCGGGAGGTGGCCGCGTTCCTTCGCATCAAGTCGAAT TGTGGCGACCTCGAGAAGGCCCGGGACAGCCTGCGCGCCGTCGAGACGACAGTCAGGGCG CGGGTCACGGCGGAGGAGGACAAGCTGAACGTCTGTGATCCTCAGGTGCAGGCGTGGCTC AAGCGCGTCGACGAGCTTCGCCTGGACACCATCGACGAGGATTACAGCAGTCTGTCGGGG TTCTCTTGCCTCTGCCAGTGCACCGTGCACGCTCGTCGCCGCGCCTCGATCGGCAAGCGT GTTGTGGACGCGCTGGAGGAGGTGAACAAACTGACCGAGGAAGGAAGGCGGTTCAGGACA TTTGGGTTCAAGCCACCGCCGAGGGCCGTCAGTCAGTTACCCCAAACTGAGACCGTTGGG TTGGAGCCCATGTTGGCTCGGGTCCATGATTTGCTTGAGAAGGGCGAGTCGAGCATAATT GGTGTGTGGGGTCAAGGAGGCATCGGCAAGACGACTCTCCTGCACGCCTTCAACAATGAT CTCGAAATGAAAGACCACCACTACCAGGTTGTTATTTTTATTGAAGTATCCAATTCAGAG ACACTGAACACAGTGGAGATGCAGCAGACTATCTCCGATAGGCTTAATTTGCCATGGAAT GAATCAGAGACAGTTGAGAAACGGGCCAGATTCCTATTGAAGGCACTGGCCAGGAAAAGA TTTCTATTGTTACTTGATGACGTAAGGAAGAGATTCCGACTGGAGGATGTCGGTATCCCA ACTCCGGACACAAAGAGCAAAAGCAAGCTGATCCTGACATCACGTTTCCAAGAAGTATGC TTCCAGATGGGTGCACAGAGGAGCCGCATTGAAATGAAGGTTTTGGATGATAATGCTGCC TGGAACCTGTTCTTGAGCAAGCTGAGCAACGAGGCTTTTGCAGCAGTTGAGTCACCGAAT TTCAACAAGGTTGTTCGGGACCAGGCCAGGAAAATATTCTCCAGTTGTGGAGGTCTACCA CTTGCACTCAATGTCATTGGGACTGCTGTGGCAGGGTTGGAAGGACCAAGAGAATGGATT TCAGCTGCTAATGACATCAATATGTTCAGCAATGAAGATGTGGATGAAATGTTTTATCGG CTGAAATACAGCTATGACAGGCTGAAACCCACTCAACAACAGTGCTTTTTGTACTGCACT CTTTTCCCAGAATATGGATCTATTAGTAAGGAACCATTAGTTGATTATTGGCTGGCTGAA GGTTTGCTTCTCAATGATCGTCAAAAGGGTGATCAGATAATTCAGAGCCTTATTTCAGCA TGCTTGTTGCAGACCGGTAGCTCATTGTCATCAAAAGTAAAAATGCACCATGTAATCAGG CATATGGGGATTTGGTTGGTTAACAAGACAGATCAAAAGTTTCTCGTTCAAGCAGGGATG GCTTTGGATAGTGCTCCACCAGCAGAAGAGTGGAAGGAATCGACAAGGATCTCCATCATG TCTAATGATATCAAAGAGCTTCCTTTCTCACCGGAATGTGAAAACCTCACTACGTTGTTG ATCCAAAATAACCCAAATTTGAACAAGCTGAGTTCAGGGTTTTTCAAGTTTATGCCCTCC TTGAAAGTGCTGGATCTTTCTCACACTGCAATAACAACACTCCCAGAATGTGAGACATTG GTTGCATTACAGCATCTCAATTTGTCACACACACGTATTAGGTTATTACCTGAGCGGCTG TGGTTATTGAAAGAGTTGAGGCATCTGGATCTCAGCGTGACTGCTGAACTCGAAGATACC TTGAACAACTGCTCAAGGTTACTCAATTTAAGAGTTCTTAATCTCTTTCGCAGTCACTAT GGTATTAGTGACGTCAACGACCTGAATCTGGATTCCCTGAAGGCACTGATGTTCCTTGGA ATCACTATTTATACAGAGAAGGTGTTAAAGAAACTGAACAAGACTAGTCCTTTGGCAAAG TCAACATATCGTCTGCATCTTAAGTACTGTAGAGAAATGCAGTCGATCAAAATCTCCGAT CTCGACCACTTGGTGCAACTCGAGGAGCTGTATGTCGAATCATGCTATAATCTAAACACT CTTGTTGCTGATACCGAGCTGACTGCATCAGATTCAGGCCTGCAGCTCCTCACCCTCTCA GTTCTTCCTGTGCTGGAGAACGTCATTGTTGCACCAACGCCCCACCATTTTCAGCACATC CGCAAATTGACCATTTCGAGTTGCCCCAAGTTGAAGAACATCACATGGGTCCTAAAACTT GAAATGCTCGAGAGGCTCGTCATAACCCATTGTGATGGGTTGCTGAAGATTGTTGAAGAA GACAGCGGTGATGAGGCAGAGACAACAATGCTGGGTCAGGGTCATCCTTCTGAAGAACAG GAAGATAAACGGATTGATGGTGGTCAAAGTGTGTGCAAGAGCGATGACAATGCGCATGCT GAGCTCCTGAACCTGAGATCAATCGTGCTGACTGATGTCAAGAGCCTGAGAAGTATCTGC AAGCCAAGAAATTTTCCCAGCCTCGAGACCATCCGGGTGGAGGATTGCCCGAATCTGAGA AGCATCCCACTGAGCAGCACGTACAACTGTGGGAAACTGAAGCAGGTGTGCGGTTCAGTT GAATGGTGGGAGAAACTGGAGTGGGAGGACAAGGAGGGCAAGGAGAGCAAGTTCTTCATT CCAATCTGA

Peptide Sequence

PEP ID	Zm00001d003048_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:30338613:30343062:-1 gene:Zm00001d003048 transcript:Zm00001d003048_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disease resistance gene analog PIC17
Sequence	MTFQAASPPNNVRADVFLARPESFQSNPHPGNRLPCCPIPAMHRVAPSLRICFLYKLQTT TPFCRFLVRLLHAHHCTSPMAEAISATSSCLEPLCGCLESTGVFEAVGREVAAFLRIKSN CGDLEKARDSLRAVETTVRARVTAEEDKLNVCDPQVQAWLKRVDELRLDTIDEDYSSLSG FSCLCQCTVHARRRASIGKRVVDALEEVNKLTEEGRRFRTFGFKPPPRAVSQLPQTETVG LEPMLARVHDLLEKGESSIIGVWGQGGIGKTTLLHAFNNDLEMKDHHYQVVIFIEVSNSE TLNTVEMQQTISDRLNLPWNESETVEKRARFLLKALARKRFLLLLDDVRKRFRLEDVGIP TPDTKSKSKLILTSRFQEVCFQMGAQRSRIEMKVLDDNAAWNLFLSKLSNEAFAAVESPN FNKVVRDQARKIFSSCGGLPLALNVIGTAVAGLEGPREWISAANDINMFSNEDVDEMFYR LKYSYDRLKPTQQQCFLYCTLFPEYGSISKEPLVDYWLAEGLLLNDRQKGDQIIQSLISA CLLQTGSSLSSKVKMHHVIRHMGIWLVNKTDQKFLVQAGMALDSAPPAEEWKESTRISIM SNDIKELPFSPECENLTTLLIQNNPNLNKLSSGFFKFMPSLKVLDLSHTAITTLPECETL VALQHLNLSHTRIRLLPERLWLLKELRHLDLSVTAELEDTLNNCSRLLNLRVLNLFRSHY GISDVNDLNLDSLKALMFLGITIYTEKVLKKLNKTSPLAKSTYRLHLKYCREMQSIKISD LDHLVQLEELYVESCYNLNTLVADTELTASDSGLQLLTLSVLPVLENVIVAPTPHHFQHI RKLTISSCPKLKNITWVLKLEMLERLVITHCDGLLKIVEEDSGDEAETTMLGQGHPSEEQ EDKRIDGGQSVCKSDDNAHAELLNLRSIVLTDVKSLRSICKPRNFPSLETIRVEDCPNLR SIPLSSTYNCGKLKQVCGSVEWWEKLEWEDKEGKESKFFIPI

Transcript Sequence

Transcript ID	Zm00001d003048_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:30338613:30343062:-1 gene:Zm00001d003048 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disease resistance gene analog PIC17
Sequence	GTCGTACGTCGTCTCGCTTCTAAAAAAAATCAAGTTACCCGGCCCAGCGCTAGAGGGCTA GAGGCTAGACTCTCTTGATCACGAGGTTCCATTCCATGTCAGTGTCAAGTTGTCAACGGA GGTGCTGGCATCTGCCATGTGGCGGAAATGATTCTTCCTGCCCAGCATCTACTTCGGGTG CCAGCTCATCAATTCATCAGCCGTCCACAAACCCGCGGGCGCAACTTCTCGGCACGTACG CAGCTGTGCGCGCGCGCGGGAGGAGTGGCGCCGCACGCAAGGTGTTTGGCGGATTGCCTC TTCCAGATCATCTCCGCCGTGCTGCCTCCTGCCTTAGACAGTCGCATGCCATTGTTGAAT GAAGCCCGGCGCGGCTCAACGGCAACCGTTGCTTCCACTTCTGGTAGGCTCTTCATCTTC ACGAGAAACGACGAGGAAACTGGTTCGCCGTAGAGTGATCTTTTCTCCCGCGTCCGGCCT CAGCCAGTTGATATTGTCCCAACCTGGCATTTTGCTCCCATTCGATGACTTTTCAAGCCG CAAGCCCACCGAACAACGTGCGCGCGGACGTTTTCTTGGCAAGGCCCGAATCCTTCCAAT CCAATCCCCATCCGGGCAACCGTCTGCCGTGTTGCCCCATTCCTGCCATGCACCGCGTGG CGCCTAGCCTCCGCATATGCTTCCTTTATAAGCTTCAAACAACAACTCCCTTTTGCAGAT TCCTCGTTCGCCTGCTGCACGCTCACCACTGTACGTCCCCGATGGCTGAAGCCATCAGCG CGACCAGCTCGTGCCTGGAACCCCTGTGCGGTTGTCTGGAAAGCACAGGCGTGTTCGAGG CAGTGGGCCGGGAGGTGGCCGCGTTCCTTCGCATCAAGTCGAATTGTGGCGACCTCGAGA AGGCCCGGGACAGCCTGCGCGCCGTCGAGACGACAGTCAGGGCGCGGGTCACGGCGGAGG AGGACAAGCTGAACGTCTGTGATCCTCAGGTGCAGGCGTGGCTCAAGCGCGTCGACGAGC TTCGCCTGGACACCATCGACGAGGATTACAGCAGTCTGTCGGGGTTCTCTTGCCTCTGCC AGTGCACCGTGCACGCTCGTCGCCGCGCCTCGATCGGCAAGCGTGTTGTGGACGCGCTGG AGGAGGTGAACAAACTGACCGAGGAAGGAAGGCGGTTCAGGACATTTGGGTTCAAGCCAC CGCCGAGGGCCGTCAGTCAGTTACCCCAAACTGAGACCGTTGGGTTGGAGCCCATGTTGG CTCGGGTCCATGATTTGCTTGAGAAGGGCGAGTCGAGCATAATTGGTGTGTGGGGTCAAG GAGGCATCGGCAAGACGACTCTCCTGCACGCCTTCAACAATGATCTCGAAATGAAAGACC ACCACTACCAGGTTGTTATTTTTATTGAAGTATCCAATTCAGAGACACTGAACACAGTGG AGATGCAGCAGACTATCTCCGATAGGCTTAATTTGCCATGGAATGAATCAGAGACAGTTG AGAAACGGGCCAGATTCCTATTGAAGGCACTGGCCAGGAAAAGATTTCTATTGTTACTTG ATGACGTAAGGAAGAGATTCCGACTGGAGGATGTCGGTATCCCAACTCCGGACACAAAGA GCAAAAGCAAGCTGATCCTGACATCACGTTTCCAAGAAGTATGCTTCCAGATGGGTGCAC AGAGGAGCCGCATTGAAATGAAGGTTTTGGATGATAATGCTGCCTGGAACCTGTTCTTGA GCAAGCTGAGCAACGAGGCTTTTGCAGCAGTTGAGTCACCGAATTTCAACAAGGTTGTTC GGGACCAGGCCAGGAAAATATTCTCCAGTTGTGGAGGTCTACCACTTGCACTCAATGTCA TTGGGACTGCTGTGGCAGGGTTGGAAGGACCAAGAGAATGGATTTCAGCTGCTAATGACA TCAATATGTTCAGCAATGAAGATGTGGATGAAATGTTTTATCGGCTGAAATACAGCTATG ACAGGCTGAAACCCACTCAACAACAGTGCTTTTTGTACTGCACTCTTTTCCCAGAATATG GATCTATTAGTAAGGAACCATTAGTTGATTATTGGCTGGCTGAAGGTTTGCTTCTCAATG ATCGTCAAAAGGGTGATCAGATAATTCAGAGCCTTATTTCAGCATGCTTGTTGCAGACCG GTAGCTCATTGTCATCAAAAGTAAAAATGCACCATGTAATCAGGCATATGGGGATTTGGT TGGTTAACAAGACAGATCAAAAGTTTCTCGTTCAAGCAGGGATGGCTTTGGATAGTGCTC CACCAGCAGAAGAGTGGAAGGAATCGACAAGGATCTCCATCATGTCTAATGATATCAAAG AGCTTCCTTTCTCACCGGAATGTGAAAACCTCACTACGTTGTTGATCCAAAATAACCCAA ATTTGAACAAGCTGAGTTCAGGGTTTTTCAAGTTTATGCCCTCCTTGAAAGTGCTGGATC TTTCTCACACTGCAATAACAACACTCCCAGAATGTGAGACATTGGTTGCATTACAGCATC TCAATTTGTCACACACACGTATTAGGTTATTACCTGAGCGGCTGTGGTTATTGAAAGAGT TGAGGCATCTGGATCTCAGCGTGACTGCTGAACTCGAAGATACCTTGAACAACTGCTCAA GGTTACTCAATTTAAGAGTTCTTAATCTCTTTCGCAGTCACTATGGTATTAGTGACGTCA ACGACCTGAATCTGGATTCCCTGAAGGCACTGATGTTCCTTGGAATCACTATTTATACAG AGAAGGTGTTAAAGAAACTGAACAAGACTAGTCCTTTGGCAAAGTCAACATATCGTCTGC ATCTTAAGTACTGTAGAGAAATGCAGTCGATCAAAATCTCCGATCTCGACCACTTGGTGC AACTCGAGGAGCTGTATGTCGAATCATGCTATAATCTAAACACTCTTGTTGCTGATACCG AGCTGACTGCATCAGATTCAGGCCTGCAGCTCCTCACCCTCTCAGTTCTTCCTGTGCTGG AGAACGTCATTGTTGCACCAACGCCCCACCATTTTCAGCACATCCGCAAATTGACCATTT CGAGTTGCCCCAAGTTGAAGAACATCACATGGGTCCTAAAACTTGAAATGCTCGAGAGGC TCGTCATAACCCATTGTGATGGGTTGCTGAAGATTGTTGAAGAAGACAGCGGTGATGAGG CAGAGACAACAATGCTGGGTCAGGGTCATCCTTCTGAAGAACAGGAAGATAAACGGATTG ATGGTGGTCAAAGTGTGTGCAAGAGCGATGACAATGCGCATGCTGAGCTCCTGAACCTGA GATCAATCGTGCTGACTGATGTCAAGAGCCTGAGAAGTATCTGCAAGCCAAGAAATTTTC CCAGCCTCGAGACCATCCGGGTGGAGGATTGCCCGAATCTGAGAAGCATCCCACTGAGCA GCACGTACAACTGTGGGAAACTGAAGCAGGTGTGCGGTTCAGTTGAATGGTGGGAGAAAC TGGAGTGGGAGGACAAGGAGGGCAAGGAGAGCAAGTTCTTCATTCCAATCTGACAGGCCC CTCCGTTCAGCTGTTCTCGGCGGTTGCTGTGTCAGTTGGCAGGAAGCTTCGTTCAATGCT GCCACGAATAAGCGGTTCGGAATCTGTATATGCGACGAGTTGTTTCTTTTACAGGTAGTC TGTGTATATTGCTTGTGTTCACAAACCTGTACATGATATGATTCATTCATGTATTGCTGT AAATGCGATCAATAAAATTCCATTTGTCTACTTG