Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003040_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:30082227:30086375:-1 gene:Zm00001d003040 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATBRCA1
Sequence	ATGGAGAACCTGAGGAGGTTCCTGAACCCGCTGGTGCTCAACCTGCAGAAGATGGAGCTG GAGCTCACCTGCCCCGTCTGCCTGAAGTTGCTCACCTCGCCCACAACGCTGCCGTGTTAC CACACATCCTGCAGCAAGTGTGCCCTTACACCGACTTCAAAAGGCTACAGCTGTGCCATT TGCAAATCAGGCTATTGTTCTCAAGATTTAAGGCCAGCTTCTCACCTTGAGTCGATAGTG AGCATTCATAGGAGCCTCAGCTCTACCGTCAGCACCATGATTGAACAACAGGATTCTCAA ATTAACATTCATGTTGCAAAGGCAGCATCTCATGGAACACCAGAATCAGGAAACAGAAGT GGGGTGGAGGAGAAATCTGACCAGATGAAATCTTACAACCCTGTTGCTTCAAAGCTAGTA TATAACCAACCAACTGGACCTGCATTTGGGAACATTGATAGTGTTCAAGCAAAAGATCCT GCATTTGAGAACAATGCTGGTGCCGCAGCTGTTGCACCAATGGCTTTTGTACGAAAGGGT CATTCTGGGTCACAATCTTCTGATGGCCCTGGAGATTTGGACTGTGACAGCAATGACCTC GAAGGAGAACTGATGACAAGCCTATCACCTCTTCAAACTGCATTGAAACGAGAGGCAAAT GCAATGGATGATCATACCAGAGAATTGAAGAAGCAAAAATCAAATGATCAAGTTCAAAGA CAAACAAACATGGCCAGTGCTTGGAAATGTGAGTTCTGTCATTCTTCCCAAGTTACTGAG TGTACTGGCCCTTTGTCACATTATTTGAATGGGGAGCCAGTAGAAGCTGATCAAGCTTGG AAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGGGCTCCTCAAGCATTCTTT ACTGGTGACACCGCAAACAACTTGGGGCCTGAGTTGGCCCGTGCTTCTAAGATCAAATGC AGTGTTTGTGGCTTAAAAGGCGCAGCACTTGGCTGCCTTGTGAAGAGCTGCCGCAAAAGT TTTCATGTCCCATGTGCCTACAACATCAAAGGCTGCAAATGGGATCAAGAGAACTTTGTT ATGCTGTGTCCTACACATTCGTCAAAAAAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAG AAGGCCAAGCTGCAGCAACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATG CAAAGGGCTGAACTTTGGACTGCCTCACCTTTTCTGACTAGTGAATGGGTGATATGTGGA TCTGCGCTCGTTGGCCATGAGAAGGAAATCTTGGATCAGTTTGAGTGTCACACTGGCATC ACAGTAACCAACACCTGGAGTTCAGATGTGACTCATGTGATTGCTAATACGGATGAACGT GGGGCATGTGCACGGACACTCAAGGTCCTCATGGCTATTTTAGCTGGGAAGTGGGTTCTC AATGTGAATTGGCTGAAAGCCTGTATGGAGGCTAGGGAACCAGTCCCAGAAGAGCCCTAC GAGATAAGGTGTGATGTTCATGGCTCTGTCGACGGCCCTCGCTCAGGAAGGCTCCGAGCG ATGCAGCAGGCACCAGGTCTGTTTGCTGGGTTGACCTTCTACTTCAGTGGCCATTTCATG CCGGGATACAGGGCCAACCTCGAAGATTTGATCGCCGCAGCAGGGGGGTCCGTTCTGGAG AAGGCCGAGCTCTCTAGCACGTCCTTGATCCTCTACAGCATGGAGGCGCCGCCGCCCCAC AACAACCTAGACGCCCTCGAGACCATCAACAAGAGATTAGCCGAGGCCCAGGAACTGGCG ACCACGGCTGGCTGCAAAGCCATTCCTCATACATGGCTTCTGGACTGTATCGCGTCGTGC GCGGTTGAGTTGAACGTGTCGTGTTCTACTGCCTAG

Peptide Sequence

PEP ID	Zm00001d003040_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:30082227:30086375:-1 gene:Zm00001d003040 transcript:Zm00001d003040_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATBRCA1
Sequence	MENLRRFLNPLVLNLQKMELELTCPVCLKLLTSPTTLPCYHTSCSKCALTPTSKGYSCAI CKSGYCSQDLRPASHLESIVSIHRSLSSTVSTMIEQQDSQINIHVAKAASHGTPESGNRS GVEEKSDQMKSYNPVASKLVYNQPTGPAFGNIDSVQAKDPAFENNAGAAAVAPMAFVRKG HSGSQSSDGPGDLDCDSNDLEGELMTSLSPLQTALKREANAMDDHTRELKKQKSNDQVQR QTNMASAWKCEFCHSSQVTECTGPLSHYLNGEPVEADQAWKSSVQHVHEKCIEWAPQAFF TGDTANNLGPELARASKIKCSVCGLKGAALGCLVKSCRKSFHVPCAYNIKGCKWDQENFV MLCPTHSSKKLPCERLKPKKKAKLQQPSSDIDGPISPSPMQRAELWTASPFLTSEWVICG SALVGHEKEILDQFECHTGITVTNTWSSDVTHVIANTDERGACARTLKVLMAILAGKWVL NVNWLKACMEAREPVPEEPYEIRCDVHGSVDGPRSGRLRAMQQAPGLFAGLTFYFSGHFM PGYRANLEDLIAAAGGSVLEKAELSSTSLILYSMEAPPPHNNLDALETINKRLAEAQELA TTAGCKAIPHTWLLDCIASCAVELNVSCSTA

Transcript Sequence

Transcript ID	Zm00001d003040_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:30082227:30086375:-1 gene:Zm00001d003040 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATBRCA1
Sequence	GCTCAAAAATCTCCCGCCTCCCGCGGATGGGATGGCATCCAGTTTCACAGACCACACGCC CACCCGCTCCGCCGCTCGCGCCCAAAAATTTTCGTTCAGCCGGCTGCCTGCCCCCCACCA CCACTTCCCTCCCGTTCCGAAACCCCGATTAGCCGCCGACCCGCCGTCTCCCCACGTATT TGACTGGTGCTAGAGCCAGCGCCCAGATCAACCTTCCTGAGTCCATCGGCACCGCATCTG CCTCGCGATCCGTCTCTCTCTCTGTCCCCTCACGGCCGTAGACCTTTTCGAGGGCGGTAT CGGAGGGAGGAGAGGGGGAGGCGAAGGCGGGAGTAGTAGAAACTAGGAAGGGCCGTTCGT GTCTTGCGGAGAAGATGGAGAACCTGAGGAGGTTCCTGAACCCGCTGGTGCTCAACCTGC AGAAGATGGAGCTGGAGCTCACCTGCCCCGTCTGCCTGAAGTTGCTCACCTCGCCCACAA CGCTGCCGTGTTACCACACATCCTGCAGCAAGTGTGCCCTTACACCGACTTCAAAAGGCT ACAGCTGTGCCATTTGCAAATCAGGCTATTGTTCTCAAGATTTAAGGCCAGCTTCTCACC TTGAGTCGATAGTGAGCATTCATAGGAGCCTCAGCTCTACCGTCAGCACCATGATTGAAC AACAGGATTCTCAAATTAACATTCATGTTGCAAAGGCAGCATCTCATGGAACACCAGAAT CAGGAAACAGAAGTGGGGTGGAGGAGAAATCTGACCAGATGAAATCTTACAACCCTGTTG CTTCAAAGCTAGTATATAACCAACCAACTGGACCTGCATTTGGGAACATTGATAGTGTTC AAGCAAAAGATCCTGCATTTGAGAACAATGCTGGTGCCGCAGCTGTTGCACCAATGGCTT TTGTACGAAAGGGTCATTCTGGGTCACAATCTTCTGATGGCCCTGGAGATTTGGACTGTG ACAGCAATGACCTCGAAGGAGAACTGATGACAAGCCTATCACCTCTTCAAACTGCATTGA AACGAGAGGCAAATGCAATGGATGATCATACCAGAGAATTGAAGAAGCAAAAATCAAATG ATCAAGTTCAAAGACAAACAAACATGGCCAGTGCTTGGAAATGTGAGTTCTGTCATTCTT CCCAAGTTACTGAGTGTACTGGCCCTTTGTCACATTATTTGAATGGGGAGCCAGTAGAAG CTGATCAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGGGCTC CTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGAGTTGGCCCGTGCTT CTAAGATCAAATGCAGTGTTTGTGGCTTAAAAGGCGCAGCACTTGGCTGCCTTGTGAAGA GCTGCCGCAAAAGTTTTCATGTCCCATGTGCCTACAACATCAAAGGCTGCAAATGGGATC AAGAGAACTTTGTTATGCTGTGTCCTACACATTCGTCAAAAAAGTTGCCTTGTGAGAGAT TAAAGCCAAAAAAGAAGGCCAAGCTGCAGCAACCATCTTCCGACATTGATGGTCCGATTT CACCCTCTCCGATGCAAAGGGCTGAACTTTGGACTGCCTCACCTTTTCTGACTAGTGAAT GGGTGATATGTGGATCTGCGCTCGTTGGCCATGAGAAGGAAATCTTGGATCAGTTTGAGT GTCACACTGGCATCACAGTAACCAACACCTGGAGTTCAGATGTGACTCATGTGATTGCTA ATACGGATGAACGTGGGGCATGTGCACGGACACTCAAGGTCCTCATGGCTATTTTAGCTG GGAAGTGGGTTCTCAATGTGAATTGGCTGAAAGCCTGTATGGAGGCTAGGGAACCAGTCC CAGAAGAGCCCTACGAGATAAGGTGTGATGTTCATGGCTCTGTCGACGGCCCTCGCTCAG GAAGGCTCCGAGCGATGCAGCAGGCACCAGGTCTGTTTGCTGGGTTGACCTTCTACTTCA GTGGCCATTTCATGCCGGGATACAGGGCCAACCTCGAAGATTTGATCGCCGCAGCAGGGG GGTCCGTTCTGGAGAAGGCCGAGCTCTCTAGCACGTCCTTGATCCTCTACAGCATGGAGG CGCCGCCGCCCCACAACAACCTAGACGCCCTCGAGACCATCAACAAGAGATTAGCCGAGG CCCAGGAACTGGCGACCACGGCTGGCTGCAAAGCCATTCCTCATACATGGCTTCTGGACT GTATCGCGTCGTGCGCGGTTGAGTTGAACGTGTCGTGTTCTACTGCCTAGGTTCAAACGT AGGAATGTGACATCTGCTGCTGTTTTTTTTTGAAAAAGGAGATTAAGAGACGATTGGCTT GTTGTCTTGATCCAAAGTATCTTTAGACGTTGTAGCATGAAAGCGGAATTTAGTCGGAAT AAGCCTGTGTATCTTAGTCAACGTTACTGTCGGTGATGTCATCCACATGTTTCACCTACT GACAGGTGCAGTTTGTCTGATTTTTTTCTTCTTGATTTGTATCTAAAAAAACATAAAAGG ATGCACTCAGGTCAGGTTTACTCCACTTTTTCTTGAATTGACGTTGGAAAAAAAAAAGAG ATTTAC