Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d003016_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:29539238:29541364:1 gene:Zm00001d003016 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phenylalanine ammonia lyase2 description: phenylalanine ammonia lyase2
Sequence	ATGCTCGTCCGCATCAACACCCTCCTCCAGGGCTACTCCGGCATCCGCTTCGAGATCCTC GAGGCCATCACCAAGCTCATCAACACCGGCGTCAGCCCGTGCCTGCCGCTGCGGGGCACC ATCACCGCGTCGGGCGACCTCGTCCCGCTGTCCTACATCGCCGGCCTCATCACGGGGCGT CCCAACGCGCAGGCCGTCACGGTTGACGGCAGGAAGGTGGACGCCGCCGAGGCGTTCAAG GCGGCCGGCATCGAGGGCGGCTTCTTCAAGCTCAACCCCAAGGAGGGCCTGGCCATCGTC AACGGCACGTCCGTGGGGTCGGCGCTCGCCGCCATGGTGTGCTTCGACGCCAACGTCCTC GCCGTCCTGTCCGAGGTCCTGTCCGCCGTCTTCTGCGAGGTGATGAACGGCAAGCCCGAG TACACGGACCACCTTACCCACAAGCTCAAGCACCACCCGGGGTCCATCGAGGCCGCTGCC ATCATGGAGCACATCCTGGATGGCAGCTCCTTCATGAAGCACGCCAAGGAGGTGAACGCC ATGGACCCGCTGCTGAAGCCGAAGCAGGACAGGTACGCGCTCCGCACGTCGCCGCAGTGG CTCGGCCCCCAGATCGAGGTCATCCGCGCCGCCACCAAGTCCATCGAGCGAGAGGTCAAC TCGGTCAACGACAACCCTGTCATCGACGTCCACCGTGGCAAGGCGCTGCACGGCGGCAAC TTCCAGGGCACCCCGATCGGCGTGTCCATGGACAACGCCCGCCTCGCCGTCGCCAACATC GGCAAGCTCATGTTCGCCCAGTTCTCCGAGCTGGTCAACGAGTTCTACAACAACGGGCTG ACCTCCAACCTGGCGGGCAGCCGCAACCCGAGCCTGGACTACGGGTTCAAGGGCACCGAG ATCGCCATGGCGTCCTACTGCTCCGAGCTCCAGTACCTGGCCAACCCCATCACCAACCAC GTCCAGAGCGCGGAGCAGCACAACCAGGACGTGAACTCCCTCGGCCTCGTCTCCGCCAGG AAGACCGCCGAGGCGGTGGACATCCTCAAGCTCATGTCGTCCACGTACATGGTCGCGCTG TGCCAGGCCGTGGACCTGCGCCACCTCGAGGAGAACCTCAAGAGCGCCGTCAAGAGCTGC GTGATGGCGGTGGCCAGGAAGGTGCTGACCACCAGCCTCGGCGGCGACCTCCACAGCGCG CGCTTCAGCGAGAAGGCCCTGCTCACCGCCATCGACCGCGAGGCGGTGTACGGGTACTAC GACGACCCCTGCAGCGCCAACTCGCCCCTGATGAAGAAGATCCGGGCCGTGCTGGTGGAC CACGCCCTCGCCAGCGGCGAGGCCGAGAAGGACGCCAGCGCGTCCGTGTTCTCCAAGATC AACAGGTTCGAGGAGGAGCTGCGCGAGGCGCTGCCCAGGGAGATGGAGGCCGCCCGCGTG GCCTTCGAGACCGGCGCCGCGCCGATCGCCAACAGGATCAAGGAGAGCCGGTCGTACCCG CTGTACCGCTTCATCCGCCAGGACCTCGGCGCCGTGTACCTGACCGGCGAGAAGCTCAAG TCCCCCGGCGAGGAGTGCAACAAGGTGTTCCTGGCCCTCAGCGAGGGCAAGCTCATCGAC CCCATGCTCGACTGCCTCAAGGAGTGGGACGGCAAGCCCCTGCCCATCTGCTGA

Peptide Sequence

PEP ID	Zm00001d003016_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:29539238:29541364:1 gene:Zm00001d003016 transcript:Zm00001d003016_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phenylalanine ammonia lyase2 description: phenylalanine ammonia lyase2
Sequence	MLVRINTLLQGYSGIRFEILEAITKLINTGVSPCLPLRGTITASGDLVPLSYIAGLITGR PNAQAVTVDGRKVDAAEAFKAAGIEGGFFKLNPKEGLAIVNGTSVGSALAAMVCFDANVL AVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGSIEAAAIMEHILDGSSFMKHAKEVNA MDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREVNSVNDNPVIDVHRGKALHGGN FQGTPIGVSMDNARLAVANIGKLMFAQFSELVNEFYNNGLTSNLAGSRNPSLDYGFKGTE IAMASYCSELQYLANPITNHVQSAEQHNQDVNSLGLVSARKTAEAVDILKLMSSTYMVAL CQAVDLRHLEENLKSAVKSCVMAVARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYY DDPCSANSPLMKKIRAVLVDHALASGEAEKDASASVFSKINRFEEELREALPREMEAARV AFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLID PMLDCLKEWDGKPLPIC

Transcript Sequence

Transcript ID	Zm00001d003016_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:29539238:29541364:1 gene:Zm00001d003016 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phenylalanine ammonia lyase2 description: phenylalanine ammonia lyase2
Sequence	CGACCGGCGGCCGGTCGTTGCAACTTGCAATTGCTGCCGCTGGGCTCGTTCTGAATTCGC ATGCTACTCCATCCGATTCCGTCCATCGTTTCTAAATTCTAACCGCGGATCTTACACCGC GCTGCCCAGGCATCTCAATGCCGGGATCTTCGGCAACGGCTCCGACGGCCACACGCTCCC GTCCGAGGTTTCGCGTGCGGCCATGCTCGTCCGCATCAACACCCTCCTCCAGGGCTACTC CGGCATCCGCTTCGAGATCCTCGAGGCCATCACCAAGCTCATCAACACCGGCGTCAGCCC GTGCCTGCCGCTGCGGGGCACCATCACCGCGTCGGGCGACCTCGTCCCGCTGTCCTACAT CGCCGGCCTCATCACGGGGCGTCCCAACGCGCAGGCCGTCACGGTTGACGGCAGGAAGGT GGACGCCGCCGAGGCGTTCAAGGCGGCCGGCATCGAGGGCGGCTTCTTCAAGCTCAACCC CAAGGAGGGCCTGGCCATCGTCAACGGCACGTCCGTGGGGTCGGCGCTCGCCGCCATGGT GTGCTTCGACGCCAACGTCCTCGCCGTCCTGTCCGAGGTCCTGTCCGCCGTCTTCTGCGA GGTGATGAACGGCAAGCCCGAGTACACGGACCACCTTACCCACAAGCTCAAGCACCACCC GGGGTCCATCGAGGCCGCTGCCATCATGGAGCACATCCTGGATGGCAGCTCCTTCATGAA GCACGCCAAGGAGGTGAACGCCATGGACCCGCTGCTGAAGCCGAAGCAGGACAGGTACGC GCTCCGCACGTCGCCGCAGTGGCTCGGCCCCCAGATCGAGGTCATCCGCGCCGCCACCAA GTCCATCGAGCGAGAGGTCAACTCGGTCAACGACAACCCTGTCATCGACGTCCACCGTGG CAAGGCGCTGCACGGCGGCAACTTCCAGGGCACCCCGATCGGCGTGTCCATGGACAACGC CCGCCTCGCCGTCGCCAACATCGGCAAGCTCATGTTCGCCCAGTTCTCCGAGCTGGTCAA CGAGTTCTACAACAACGGGCTGACCTCCAACCTGGCGGGCAGCCGCAACCCGAGCCTGGA CTACGGGTTCAAGGGCACCGAGATCGCCATGGCGTCCTACTGCTCCGAGCTCCAGTACCT GGCCAACCCCATCACCAACCACGTCCAGAGCGCGGAGCAGCACAACCAGGACGTGAACTC CCTCGGCCTCGTCTCCGCCAGGAAGACCGCCGAGGCGGTGGACATCCTCAAGCTCATGTC GTCCACGTACATGGTCGCGCTGTGCCAGGCCGTGGACCTGCGCCACCTCGAGGAGAACCT CAAGAGCGCCGTCAAGAGCTGCGTGATGGCGGTGGCCAGGAAGGTGCTGACCACCAGCCT CGGCGGCGACCTCCACAGCGCGCGCTTCAGCGAGAAGGCCCTGCTCACCGCCATCGACCG CGAGGCGGTGTACGGGTACTACGACGACCCCTGCAGCGCCAACTCGCCCCTGATGAAGAA GATCCGGGCCGTGCTGGTGGACCACGCCCTCGCCAGCGGCGAGGCCGAGAAGGACGCCAG CGCGTCCGTGTTCTCCAAGATCAACAGGTTCGAGGAGGAGCTGCGCGAGGCGCTGCCCAG GGAGATGGAGGCCGCCCGCGTGGCCTTCGAGACCGGCGCCGCGCCGATCGCCAACAGGAT CAAGGAGAGCCGGTCGTACCCGCTGTACCGCTTCATCCGCCAGGACCTCGGCGCCGTGTA CCTGACCGGCGAGAAGCTCAAGTCCCCCGGCGAGGAGTGCAACAAGGTGTTCCTGGCCCT CAGCGAGGGCAAGCTCATCGACCCCATGCTCGACTGCCTCAAGGAGTGGGACGGCAAGCC CCTGCCCATCTGCTGAGGAGTGAGGAGGAGGACGCCACCGGTGCCAAGAGGCAAGACCCG CAAGAGGAGGAGATGACACCGTACGCGCGCGAGGAAGAAATAAAGAAGGGAGTATTTCGG TATTCTCAAGCAGGCTTCATATCGTTTGCGATCTGAAGATCATTATATGTTGTTCCTCTG TACTCATCTTTTTTGTTTGGAGCTTGT