Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002962_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:28204145:28226242:-1 gene:Zm00001d002962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable sphingolipid transporter spinster homolog 2
Sequence	ATGGGGGTACGAGTCCTGAAGAAGGCAGATGGGGCTGCAAACAAATCCTGCTCCCATCAT CTCTGGGAGGGATATAATCCTTTCAGGCTTATTGGTGTTGGCTTGTTAGTGTGGACTATC GCAACAGCTGGTTGTGGAGTATCATTTGATTTCTGGTCAATTACTATATGCCGCATGTTT GTTGGCGTTGGCGAAGCTTCATTTATAAGTCTCGCAGCTCCATTCATTGATGACAATGCA CCGGTAGCTCAGAAAACAGCATGGCTTGGTATGTTCTACATGTGTATACCAACTGGGATA GCATTAGGCTATGTTTATGGCGGACTGGTTGGAAAATATCTGAACTGGCGTGCTGCTTTC TGGGGAGAGTCAATATTGATGGTTCCTTTTGTTATTCTTGGATTTGCTCACAACACAACA AAAGAATATGGCCAGATGCTTAATCCTGAGGTTCAAGATCAGATAAATAATAATGCGACA AAGCATGTTTTGCCTGGTGGAATTGAGGATCTTTCAGGGAAGGTTCCACAAAAGTTCTCC TTGTCCAGTTTTTGCCACGGTATCATGACTGAAATTGGTCGCTTCAGCAAAGATATGAAA GAACTACTACAAGAGAAGGTTTTTGTCATCGTTGTTTTAGGTTATATATCCTACAATTTC GTCATTGGTGCTTATTCCTACTGGGGCCCAAAGGCAGGTCAAGAGATCTACAATATGAGC CTTTATGGGTTCATACCCTCCTTTGCAGTTGGGGAGCTTTCAGTGTTCGCAACTCAGGCA CCTGTAAATTTTGTATGCCTTCACGCCGTGAAGCCACATTTGCGGCCATTGGCAATGGCC GTATCCACTGTTTCAATCCATATATTTGGCGATGTGCCTTCTTCACCTCTTGTTGGGCTT CTTCAGGACAAAATCAATAATTGGAGGGCCACAGCTCTTATTTTGACATCCATCCTTTTC GCTGCTGTTGTGTTCTGGTTCATTGGCATATTTATCCCCAGCGTCGATCGTTTCAATGAA GAGAGCGAGCATGGCCTTACTGTCGCCGAGAGATCAAATCTCAGGCCGCTCCTTGATGAA AAGGACGAGCCACGGACATCTGACTAA

Peptide Sequence

PEP ID	Zm00001d002962_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:28204145:28226242:-1 gene:Zm00001d002962 transcript:Zm00001d002962_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable sphingolipid transporter spinster homolog 2
Sequence	MGVRVLKKADGAANKSCSHHLWEGYNPFRLIGVGLLVWTIATAGCGVSFDFWSITICRMF VGVGEASFISLAAPFIDDNAPVAQKTAWLGMFYMCIPTGIALGYVYGGLVGKYLNWRAAF WGESILMVPFVILGFAHNTTKEYGQMLNPEVQDQINNNATKHVLPGGIEDLSGKVPQKFS LSSFCHGIMTEIGRFSKDMKELLQEKVFVIVVLGYISYNFVIGAYSYWGPKAGQEIYNMS LYGFIPSFAVGELSVFATQAPVNFVCLHAVKPHLRPLAMAVSTVSIHIFGDVPSSPLVGL LQDKINNWRATALILTSILFAAVVFWFIGIFIPSVDRFNEESEHGLTVAERSNLRPLLDE KDEPRTSD

Transcript Sequence

Transcript ID	Zm00001d002962_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:28204145:28226242:-1 gene:Zm00001d002962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable sphingolipid transporter spinster homolog 2
Sequence	ATGGGGGTACGAGTCCTGAAGAAGGCAGATGGGGCTGCAAACAAATCCTGCTCCCATCAT CTCTGGGAGGGATATAATCCTTTCAGGCTTATTGGTGTTGGCTTGTTAGTGTGGACTATC GCAACAGCTGGTTGTGGAGTATCATTTGATTTCTGGTCAATTACTATATGCCGCATGTTT GTTGGCGTTGGCGAAGCTTCATTTATAAGTCTCGCAGCTCCATTCATTGATGACAATGCA CCGGTAGCTCAGAAAACAGCATGGCTTGGTATGTTCTACATGTGTATACCAACTGGGATA GCATTAGGCTATGTTTATGGCGGACTGGTTGGAAAATATCTGAACTGGCGTGCTGCTTTC TGGGGAGAGTCAATATTGATGGTTCCTTTTGTTATTCTTGGATTTGCTCACAACACAACA AAAGAATATGGCCAGATGCTTAATCCTGAGGTTCAAGATCAGATAAATAATAATGCGACA AAGCATGTTTTGCCTGGTGGAATTGAGGATCTTTCAGGGAAGGTTCCACAAAAGTTCTCC TTGTCCAGTTTTTGCCACGGTATCATGACTGAAATTGGTCGCTTCAGCAAAGATATGAAA GAACTACTACAAGAGAAGGTTTTTGTCATCGTTGTTTTAGGTTATATATCCTACAATTTC GTCATTGGTGCTTATTCCTACTGGGGCCCAAAGGCAGGTCAAGAGATCTACAATATGAGC CTTTATGGGTTCATACCCTCCTTTGCAGTTGGGGAGCTTTCAGTGTTCGCAACTCAGGCA CCTGTAAATTTTGTATGCCTTCACGCCGTGAAGCCACATTTGCGGCCATTGGCAATGGCC GTATCCACTGTTTCAATCCATATATTTGGCGATGTGCCTTCTTCACCTCTTGTTGGGCTT CTTCAGGACAAAATCAATAATTGGAGGGCCACAGCTCTTATTTTGACATCCATCCTTTTC GCTGCTGTTGTGTTCTGGTTCATTGGCATATTTATCCCCAGCGTCGATCGTTTCAATGAA GAGAGCGAGCATGGCCTTACTGTCGCCGAGAGATCAAATCTCAGGCCGCTCCTTGATGAA AAGGACGAGCCACGGACATCTGACTAAAACCTACGCAAGTCATAACCTTTTATTTCTTGG CTTAGTCCGTAGTTTTTCCCTTATGCCATCAACATGTGAAATGTAAATTTGCATGCCCAT TGGCTGTACCTGTACATATACGAGGTTTGTTCGTTTTGCGTTATTCTTTTACTTTTTTTT GTACAGGCTACAGAAACAAGCAAAAGAGTGCTAGAATTCCTTTTTTTACGAATTAAAACA TTTTAGAATTTCTTTTTACGAATGTAAAACGTGTTCGGATTGTGACATGGCATAACTTTC TGGTTATGCGGTTATGCTCTGCTCACGGGAGGCTAGGTGATGTCACTGTATGCCTAGATG GATCTGCAACTACTCTTTCGTGGCTACTTTGAGCACCTCGAATCCCCTTGGGGATTGGAG TGGATTAAGAGCTTGTTCGATTAGTTCTTAATCCATGTGGATTTGGGTATTCTAATTTTT TTTAATCTCGTCCAATCCATGTATAACGGGAATAACCGAACAAGGTTTAAGGTGGAAATG AACTAATTTCTTCTTCAATCCTCTTCAATCCTGAACTCTTCAATCCTGAAGGGGATTTGA GTTTCTAAATTAGCCCTCAGTGGCATCGATATAGCCTACCCAATGCTCATCTGCAGCATA TTGTACAAAACAGGAGATTTAGGATGTGTTTGTTTTCTTCCTATATTATATAAGTTGAAT TATAGTAGAAAGATGGGAGAGTAAAATATCACTTCATAATCGCAAATAAGTTGAACTAAG CTAGTATTAGGTTGCTTATTTCAGCTTTTTTGTAATTCCAAAGTGATATTTTACTTTCCT ACCCTTTCACAGTAATCCAACTTATTCTCAAAATGTTGGGTCGGTTAATTTGGGTAATTT AAATTTCAGGTTCTAAGAATTAGTAC