Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002950_T014
CDS Infomation

cds chromosome:B73_RefGen_v4:2:27929570:27938813:1 gene:Zm00001d002950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CHROMATIN REMODELING 24
Sequence

ATGGATCCAACTGGAACTGCTGCAACATCCAAGCCATACAAGCTCCCAGGAAAGATATTC
AAGATGCTTTTCGCCCACCAGCGCGAGGGCCTCCGATGGCTCTGGGTTCTGCACTGCAGG
GGAACAGGAGGAATCCTAGGGGATGACATGGGTCTTGGCAAGACGATGCAGGTTGCTGCA
TTTTTGGCTGGACTGTTTCATTCTCGTCTAGTCAAGAGGGTGCTCATTGTTGCTCCAAAG
ACACTTCTGGCCCATTGGACAAAGGAGCTTTCAATTGTTGGCCTTAAAGAAAAGATCAGA
GACTACTCTGGCCCCAGCACAAATATTCGCAATTATGAACTCCAATATGCCTTCAAGGAG
GGTGGTATCCTCATAACCACCTATGACATTGTCAGGAACAACTACAAGCTCATAAGAGGC
AACTCCTACAACAACAGCAATGATGATGATGATGAGGAAGGAACTTTGTGGAATTACGTA
ATTCTTGATGAGGGACATCTAATAAAAAATAATAAGACACAAAGGGCCCAAAGTTTGTAC
GAAATACCTTGTGCCCATCGCATTGTGATCAGTGGAACACCTATTCAAAATAACTTGAAG
GAAATGTGGACTCTGTTCAATTTCTGTTGCCCAGATGTCTTGGGTGATAAACAGCAGTTC
AAAATAAGGTATGAAACGGCTATCCTTCGAGGAAATGACAAAAATGCTACCGCTCGAGAG
AAGCACGTAGGCTCAAATGTAGCAAAGGAACTAAGAGAGCGAATCAAGCCATACTTTTTG
CGGCGCCTGAAAAGTGAAGTTGTCTTTGATACTGGTGCATCAGAAGAAAAAACATTAGCC
AAGAAGAATGAGCTAATTGTCTGGCTGAAGTTAACACCATGCCAGAGGAAACTATATGAA
GCTTTTCTAAATAGTGAGCTGGTTCATTTAGCATTGCAGCCAAAGGCATCACCGTTGGCT
GCAATCACAATATTGAAGAAAATATGTGATCATCCACTGCTATTAACTAAGAAAGGTGCT
GAGGGTGTGTTGGAAGGAATGGGTGAAATGTTGAATGATCAAGACATTGGAATGGTGGAA
AAAATGGCCATGAACCTTGCAGATATGGCTCATGATGATAATGCACTGGAAGTTGGTCAG
GATGTCTCATGCAAGCTATCATTCATCATGTCCTTGTTGCGGAACCTTGTTGGAGAGGGG
CATCATGTTTTAATATTTTCACAGACTCGTAAAATGCTAAACCTTATTCAGGAAGCTATA
ATATTAGAGGGCTATGCGTTTTTGCGCATTGATGGCACCACCAAGGTTTCTGACCGGGAA
AGGATTGTGAAGGACTTCCAAGAGGGTTGTGGAGCTCCAGTTTTTCTGCTAACCACACAA
GTTGGTGGGCTTGGACTTACACTCACCAAGGCAACTCGTGTCATTGTAGTTGATCCTGCA
TGGAACCCTAGTACAGACAATCAAAGTGTTGATCGTGCTTACCGAATTGGACAGACTAAA
AATGTGATTGTATACCGCTTGATGACATCTGCGACCATTGAAGAAAAGATATACAAATTG
CAGGTTTTGAAGGGCGCTCTGTTCAGGACAGCTACGGAGCAAAAAGAGCAAACACGTTAC
TTCAGCAAGAGTGAGATTCAAGAGCTATTTAGTTTGCCACAACAAGGATTTGATGTTTCC
CTCACACATAAGCAGTTGCAAGAAGAGCATGGTCAACAAGTTGTTCTGGATGAGTCCTTG
AGGAAGCATATACAGTTTCTGGAGCAACAAGGAATAGCCGGTGTGAGTCATCACAGCCTC
CTATTCTCTAAAACTGCAACCCTGCCCACTCTGAGTGAGAATGATGCACTGGACAGCAAA
CCTCGGGGCATGCCCATGATGCCCCAGCAATATTACAAGGGATCCTCATCTGACTATGTC
GCCAACGGGGCATCTTTTGCGCTGAAGCCAAAGGATGAAAGTTTCACTGTTCGAAACTAC
ATTCCAAGTAACAGAAGCGCAGAGAGTCCTGAAGAGATAAAGGCAAGAATCAACCGGCTT
TCACAGACCCTCTCCAACGCTGTGCTGTTGTCGAAGCTACCAGATGGTGGTGAGAAGATA
AGGAGGCAGATAAATGAGCTGGACGAGAAGCTGACTTCTGCTGAGAAGGGGCTGAAGGAG
GGGGGCACTGAAGTGATTTCCTTGGATGACTGA

Peptide Sequence

PEP ID

Zm00001d002950_P014
PEP Infomation

pep chromosome:B73_RefGen_v4:2:27929570:27938813:1 gene:Zm00001d002950 transcript:Zm00001d002950_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CHROMATIN REMODELING 24
Sequence

MDPTGTAATSKPYKLPGKIFKMLFAHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVAA
FLAGLFHSRLVKRVLIVAPKTLLAHWTKELSIVGLKEKIRDYSGPSTNIRNYELQYAFKE
GGILITTYDIVRNNYKLIRGNSYNNSNDDDDEEGTLWNYVILDEGHLIKNNKTQRAQSLY
EIPCAHRIVISGTPIQNNLKEMWTLFNFCCPDVLGDKQQFKIRYETAILRGNDKNATARE
KHVGSNVAKELRERIKPYFLRRLKSEVVFDTGASEEKTLAKKNELIVWLKLTPCQRKLYE
AFLNSELVHLALQPKASPLAAITILKKICDHPLLLTKKGAEGVLEGMGEMLNDQDIGMVE
KMAMNLADMAHDDNALEVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKMLNLIQEAI
ILEGYAFLRIDGTTKVSDRERIVKDFQEGCGAPVFLLTTQVGGLGLTLTKATRVIVVDPA
WNPSTDNQSVDRAYRIGQTKNVIVYRLMTSATIEEKIYKLQVLKGALFRTATEQKEQTRY
FSKSEIQELFSLPQQGFDVSLTHKQLQEEHGQQVVLDESLRKHIQFLEQQGIAGVSHHSL
LFSKTATLPTLSENDALDSKPRGMPMMPQQYYKGSSSDYVANGASFALKPKDESFTVRNY
IPSNRSAESPEEIKARINRLSQTLSNAVLLSKLPDGGEKIRRQINELDEKLTSAEKGLKE
GGTEVISLDD

Transcript Sequence

Transcript ID

Zm00001d002950_T014
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:27929570:27938813:1 gene:Zm00001d002950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CHROMATIN REMODELING 24
Sequence

TCCCCCTCCCTTCGACCTCTGCGGCGATCTCGACGACGACGACATCGGATCGCCATCTCC
CTGCCGCCGCCCCTACGCCGAACGGCCTCAACGACCACCTCCTCCGCTTCACCCGCAGCC
TCCAGCGCCCCACCCAAAACCCTAACCCTAGCCCCAATCCGCCACCGCCTCCGCCCCCAG
CCGCCGCCGAAGAACAAGTCGAGAAGGTCAAGCTCGCCGGCCGCCGCCGCCTATGCAAGC
TTGCCACCACCACCACCGCCACTCAGCGAGTGGATGAAGAGGAGGCGGAGTGGGACAACC
AGGACGACGGTGAAAGCATACTCGACATCCTAGACGACCTCACCACACGATTTGACTCTC
TATCCGTCCAGAAGCCCAGCACCGCCGCGAGGTCCAGGACACAACAGCTCACCCCTTTGC
CGTGCGCCATCACCGTGGACGACGACCTAGATGACCATAGCCCAGATGATGTGGATGCTC
ACGCCGGTGCCTCCTCACCCCTTCAAATTTCTAGCTCTGATGAAGCTAGGGCTCCCACCA
GACGCTCCGAGGTCAAGATCGAAACTGATTTAGTCTCCTCAGCCTGTACCCATTATGCCT
GTGATGACGTCCGTGGCAAGGGGAAGAACAAAGGGACCACCAAGGATGTTGGGAGGCTAA
ATAGGGTATCAAAGGCCTCATCCTTTGTTGATTCTTATTCCGATTCTGATTATGACGACT
GCGAGGAGGACCAAGGAACAAGAACAGATTATGCTGTTAAGCAGCTAAGAAGCAAGGGAT
TCACAAGGAGACCACCCAACACCCCAACATTCAGGAACCATGGTGTCAGCGACGATGAGC
TGGGTCAGGAGAAGGAGAACCTTGGAGCTGTGGAGAACAATGCTGAGGATGTTGGATGGG
AGAAGACAGAGGACTTCAAGATGGATCCAACTGGAACTGCTGCAACATCCAAGCCATACA
AGCTCCCAGGAAAGATATTCAAGATGCTTTTCGCCCACCAGCGCGAGGGCCTCCGATGGC
TCTGGGTTCTGCACTGCAGGGGAACAGGAGGAATCCTAGGGGATGACATGGGTCTTGGCA
AGACGATGCAGGTTGCTGCATTTTTGGCTGGACTGTTTCATTCTCGTCTAGTCAAGAGGG
TGCTCATTGTTGCTCCAAAGACACTTCTGGCCCATTGGACAAAGGAGCTTTCAATTGTTG
GCCTTAAAGAAAAGATCAGAGACTACTCTGGCCCCAGCACAAATATTCGCAATTATGAAC
TCCAATATGCCTTCAAGGAGGGTGGTATCCTCATAACCACCTATGACATTGTCAGGAACA
ACTACAAGCTCATAAGAGGCAACTCCTACAACAACAGCAATGATGATGATGATGAGGAAG
GAACTTTGTGGAATTACGTAATTCTTGATGAGGGACATCTAATAAAAAATAATAAGACAC
AAAGGGCCCAAAGTTTGTACGAAATACCTTGTGCCCATCGCATTGTGATCAGTGGAACAC
CTATTCAAAATAACTTGAAGGAAATGTGGACTCTGTTCAATTTCTGTTGCCCAGATGTCT
TGGGTGATAAACAGCAGTTCAAAATAAGGTATGAAACGGCTATCCTTCGAGGAAATGACA
AAAATGCTACCGCTCGAGAGAAGCACGTAGGCTCAAATGTAGCAAAGGAACTAAGAGAGC
GAATCAAGCCATACTTTTTGCGGCGCCTGAAAAGTGAAGTTGTCTTTGATACTGGTGCAT
CAGAAGAAAAAACATTAGCCAAGAAGAATGAGCTAATTGTCTGGCTGAAGTTAACACCAT
GCCAGAGGAAACTATATGAAGCTTTTCTAAATAGTGAGCTGGTTCATTTAGCATTGCAGC
CAAAGGCATCACCGTTGGCTGCAATCACAATATTGAAGAAAATATGTGATCATCCACTGC
TATTAACTAAGAAAGGTGCTGAGGGTGTGTTGGAAGGAATGGGTGAAATGTTGAATGATC
AAGACATTGGAATGGTGGAAAAAATGGCCATGAACCTTGCAGATATGGCTCATGATGATA
ATGCACTGGAAGTTGGTCAGGATGTCTCATGCAAGCTATCATTCATCATGTCCTTGTTGC
GGAACCTTGTTGGAGAGGGGCATCATGTTTTAATATTTTCACAGACTCGTAAAATGCTAA
ACCTTATTCAGGAAGCTATAATATTAGAGGGCTATGCGTTTTTGCGCATTGATGGCACCA
CCAAGGTTTCTGACCGGGAAAGGATTGTGAAGGACTTCCAAGAGGGTTGTGGAGCTCCAG
TTTTTCTGCTAACCACACAAGTTGGTGGGCTTGGACTTACACTCACCAAGGCAACTCGTG
TCATTGTAGTTGATCCTGCATGGAACCCTAGTACAGACAATCAAAGTGTTGATCGTGCTT
ACCGAATTGGACAGACTAAAAATGTGATTGTATACCGCTTGATGACATCTGCGACCATTG
AAGAAAAGATATACAAATTGCAGGTTTTGAAGGGCGCTCTGTTCAGGACAGCTACGGAGC
AAAAAGAGCAAACACGTTACTTCAGCAAGAGTGAGATTCAAGAGCTATTTAGTTTGCCAC
AACAAGGATTTGATGTTTCCCTCACACATAAGCAGTTGCAAGAAGAGCATGGTCAACAAG
TTGTTCTGGATGAGTCCTTGAGGAAGCATATACAGTTTCTGGAGCAACAAGGAATAGCCG
GTGTGAGTCATCACAGCCTCCTATTCTCTAAAACTGCAACCCTGCCCACTCTGAGTGAGA
ATGATGCACTGGACAGCAAACCTCGGGGCATGCCCATGATGCCCCAGCAATATTACAAGG
GATCCTCATCTGACTATGTCGCCAACGGGGCATCTTTTGCGCTGAAGCCAAAGGATGAAA
GTTTCACTGTTCGAAACTACATTCCAAGTAACAGAAGCGCAGAGAGTCCTGAAGAGATAA
AGGCAAGAATCAACCGGCTTTCACAGACCCTCTCCAACGCTGTGCTGTTGTCGAAGCTAC
CAGATGGTGGTGAGAAGATAAGGAGGCAGATAAATGAGCTGGACGAGAAGCTGACTTCTG
CTGAGAAGGGGCTGAAGGAGGGGGGCACTGAAGTGATTTCCTTGGATGACTGATCCAAGA
CATGGAGAGTCTGTGCTCGGCAAAAGTAAAGTGTTTTGAATAGCTTTAGTCACTGGGTTG
TGACTAGCATCAATCAAGTCTGCTCTTTTTGCTGCATCTCTGGGCTGGGTCTATCGTTTA
TGCAATACAATGCTTTTTCTGATGATGATTATATGAATAATATAATCCCCAGACAAAGCA
GCAACCATTACAGTCAGACAGAGATGCAGAATGCTTGGTGGGTTTGCTTGATCACTCTAT
AGTCCGTCCGTTCATT