Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002940_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:2:27630706:27636481:1 gene:Zm00001d002940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Sequence	ATGATGGCCACCGCTGAATCGGACGACGACGCCATCTGGGTACCGCCTGATGAGGCAGCA GCAGCAGCAGACAGCATGATGCAAGATGATGATGATGATGATGATGATTACCATGCCGGA ACCGGAGAGGAGGATGACGAATCCGAGGACGACGATGATGCTACCAGCAGTATCTGCAGG TGGCGCCATGACTCTGATCATCAGTCCGCCGCCCACAGGGAGGAGCGGCAGAAAGCCATG CTGAGAGCCATGAACGGGCAGCTCAGAATGCTCGCCGCTCGCTTTCTAGAGTCGGCTGGC ATTGATACCAGCAGCTGGCTTGATATCGTCATCTCCCTGTCCTGGGAAGCTGCCCTTGCC ATCAAGCCTGATGTTGGCACTGCTGTAGGCAACCAAATGGACCCTTCCTCATACATCAAG GTTAAGTGCCTAGCATCTGGGACACCCCGCCAATGTGAGGTCGTCAAGGGCCTAGTCTTC AGGAAGAACGTCGCTCATAAGCACATGCCCACCAAGTGTCACAATCCCAGGCTGCTGCTT CTTAGTGGACTCCTCGGCCATTCCCATGTTGGCTTCTCATCGTTCAGTTCCATAGAGCAG GAGAAAGACCATCTGGACAAGTCTGTCTGCGAAATGATGGAGATCTGCCGCCCAGATGTC GTCTTGGTCGAGAGAACGGTTTCACGCGACATACAGGAGCTTCTTCTCAAGGAAGGTGTC ACTCTAGTGCTTGACATGAAGCTCAACCGGCTGCAGAGGGTTGCTCGCTGCTCCGGCGCC CCCATAGTCTCGTTTTCAGAGGTTCTCAGCAAGCCAAAGCTGAAGCAGTGCGACTACTTC CACATTGAAAAGGTGACGGAGGAGCACAGCCTGATTACCTGCAGCGCTGGAGTTGGAAGC AGGCCATCTAAAACATTAATGTTCCTGGAAGGCTTTCACAAGCCACTGGGATGCACGATA TTGCTAAGGGGAGCAAATACTCAAGAACTGAAGAAAATCAAGCAGGTCATGAACTACACA GTGTTTGCAGCGTACCGCCTCGTTCTTGAGACATCCTTCTTCGAAGATCAGAGACTAATC TTGAACAATAAGGATTCTTCCAAAGAAGAAGTTTCTGTCGCTAGGAAGGCCGGACCATCG TCACTAGGATCAGTACAGGAAACTACTGATTCCAATGCTCTAAATCCACTCGACAAGGGC TTCCCTAATCAAGCACTACTCCCTTCTGAAGGACTAGTAGTATCAGCAGTCCCAGAATCA CCCAGAAGATTCATTGATATACTCCGTTATCATAATATTTATTTGCCGGTCACTTCTTCT CAAGAGGCAACTGATCATCAGATACAAGACAGTATCCATATCAGCCCAAACGTTGGAGTA CCAATTGGTTCTGTTGAGAGTGTGGATCATTTAAGCGATCCCCAGGAACAAGCATCCTCT GAAACCAATCAGCAAATGGCATTGGACGGCCCTTCGGTTAGTGAAAAACATGAGCAGTCA TTGGAAAATATTAAAACATCTGATACAGATGAGGTGGACGATGTGTTGGAGTCTCAGAGC ATACTTATTTTGCTGTCTAGCCAGTGTATCACAAAGCAGGTTATCTGCGAGCAGAGCCGT CTATCCCGTATAAGATACTACGGGAATTTTGATGTTTCCTTAGGACGCTATTTGCAAGAC ATTTTGCAGAAGCAGAATCTCAGCTGTTCCTCATGTGGAGAGCCTCCAGAGGCTCACATG TATTCCTACACTCACCGCAATGGGAATCTGACTGTTCTTGTGAGGCACTTGCTGCCTAAA TATCGTTTACCTGGTGAATCAGAAGGAAAGATTTGGATGTGGACTAGATGCTTAAGGTGT GAACGTGAAAGTGGGATCTCCAGATCATCACGAAGGGTGATAATGTCAGCTGAAGCACAC TACCTTTCATTTGGGAAGTTCCTTGAACTCAGTTTTTCAAACCACTCAACCGCTAGAAGG CTGTCAATATGCGGGCATTCACTCAATACCGATTGTCTGCGCTTTTTTGGGTTGGGCTCC AAAGTTGCAATGTTCCAGTATTCCTCAGTCGAAATTTACAATGCCTGCAAACCACAGCCT ACTCTTGAGTTTCACAATCCCGATATGCACGAGTGGTACGGGCAAGAGGTACGAAATGTT CTTGCCACAGGAGTTACACTTTTCTCGGAAGTCACAAGCGCACTACAGAAGCTCAAGGAT CAGTTTCCTGTTAAAGACCTTTCCCAACTTGAAGAGATGTTGATTAAAGAGAAGGCTGAG TTCATGGATTCTCTAGCAAAGACTGTTGATCGAAATAGGGAATCAAGCTCTGTGGATGAT ATCCTTAATGTAAATTGGCTCTATCAGGATCTTCTACTGGAACTTTATGTGTGGGACTGC CGGCTGCACCAACTTGTAGATTGTACACTTGCTGAAAACGCAATAGTGGCAAATGGCCAA ACTGCAGCAGCCGCTGAAGCAGACGGAATCGGTGAGCGCATGAGCAGCATAGCACCTTTT GAGAATAGATGTATCAAGGAACCAGAGAAGTTCATTGAAGCAGGGACTGCATCAGCCTTG CTTGATGATGCATGGAATGATAAGCATTGCAATGATCAGCACAACACAAACTGTGAGTGT GACGGGGGGGAAGAAAAATGGATTTGGAACCCAGTGAATGAGTCCAGATTGGCTTTCAGG CAGGAAGTGGAAGTTGGATGTTTGGAAAGGTTTGAGGTCGTTAACCACTACTGTCCAAGT CATTTATCCCCCTTGCACAAACACAGAGAATCTGGCGAGGAGATGGGGGGATCTCCACAG TTCACAGTAGGTCCAGGTGGCAGTATCTTGTGTGTATCAGAGGATGAGATATCCAGTATA ATATCACGAGCTCTTGCTGTATCCGAGGAACGTCGGCACTTACTGATGGATGCTGTCGCT GAGACTGAACCAGCAGATACCACCAGGAGTAAAACAATGGACAAGTCTTACAGCTCTTTA TCTGAAAGTTCATCTGCTTCTCTGTGGTCTTCGGATTCTGAGGCAAGCATTTCGTCTGAC GACCTCTCCAGCTATGATACCTCGCTTCTTCTATCGTCCTCTCTCCATCCAGAAATAGCT GTCAACGGGATAACAGCTCTCAAAGGGAGGTACTCGGTCATCTGTGTACACTCTAACCAG TTCTACAACCTCCGAAGGAAATGCTGCCCATCGGAGCTTGCATACGTTGCCTCATTGAGC CGTTGCAAGAGGTGGGATGCTCAGGGCGGGAAGAGCAAGGCATTCTTTGCAAGAACAATG GATGGCAGGCTCATCATAAAGCAAATAAAGAAGACAGAGTTTGAGTCCTTCATAAAATTT GCGCCTGATTACTTCAGGCATGTCAACCATTCTCTGGACACGGGGAGCCAGACTTGCCTT GCCAAAATCTTAGGGATCTATCAGGTGAAGCAGACAAGACATGGCAAGGAGATCAAGATG GATCTGATGGTGATGGAGAACATCTTGTTTGGACACAATGTGTCGCGGACATATGATCTG AAAGGCGCCATCTTTTCACGTTATGTCTCCGACCCAAATGACCATGCTGGCACTGTCTAC TTGGACCAGAACTTTGTGGATGACATGCGTGTTTCTCCAATCTATATTGGTGGAAGAGCA AAGCATCTCTTGGAGCGGGCAATCTGGAACGACACGTCTTTTCTCACGTCCATCAATGTC ATGGACTACTCTTTGCTGGTTGGAGTGGACAGGCAGAAGCGTGAGCTGGTATTCGGCATC ATCGACTACCTGAGGCAGTATACATGGGACAAGCAGCTGGAGACGATGGTGAAAGCGTCT CTGGTGGTGCCCAAGAATGAATCGCCAACGGTGATTTCCCCAAGGGATTACAAGAAGAGG TTCAGGAAGTTCATGAGCAAGCACTTCCTCACAGTTCCCGACGAGTGGAGCACGGAGAGT CGGCCGCCGGTGGCCTGGGAGTCCTGTGCCCACGCCGGCGAGTTGCCGGGAGTGAAGCCC CAGCATCCAAGCCCAATCCTCCTGGCGTGCGCTTAA

Peptide Sequence

PEP ID	Zm00001d002940_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:2:27630706:27636481:1 gene:Zm00001d002940 transcript:Zm00001d002940_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Sequence	MMATAESDDDAIWVPPDEAAAAADSMMQDDDDDDDDYHAGTGEEDDESEDDDDATSSICR WRHDSDHQSAAHREERQKAMLRAMNGQLRMLAARFLESAGIDTSSWLDIVISLSWEAALA IKPDVGTAVGNQMDPSSYIKVKCLASGTPRQCEVVKGLVFRKNVAHKHMPTKCHNPRLLL LSGLLGHSHVGFSSFSSIEQEKDHLDKSVCEMMEICRPDVVLVERTVSRDIQELLLKEGV TLVLDMKLNRLQRVARCSGAPIVSFSEVLSKPKLKQCDYFHIEKVTEEHSLITCSAGVGS RPSKTLMFLEGFHKPLGCTILLRGANTQELKKIKQVMNYTVFAAYRLVLETSFFEDQRLI LNNKDSSKEEVSVARKAGPSSLGSVQETTDSNALNPLDKGFPNQALLPSEGLVVSAVPES PRRFIDILRYHNIYLPVTSSQEATDHQIQDSIHISPNVGVPIGSVESVDHLSDPQEQASS ETNQQMALDGPSVSEKHEQSLENIKTSDTDEVDDVLESQSILILLSSQCITKQVICEQSR LSRIRYYGNFDVSLGRYLQDILQKQNLSCSSCGEPPEAHMYSYTHRNGNLTVLVRHLLPK YRLPGESEGKIWMWTRCLRCERESGISRSSRRVIMSAEAHYLSFGKFLELSFSNHSTARR LSICGHSLNTDCLRFFGLGSKVAMFQYSSVEIYNACKPQPTLEFHNPDMHEWYGQEVRNV LATGVTLFSEVTSALQKLKDQFPVKDLSQLEEMLIKEKAEFMDSLAKTVDRNRESSSVDD ILNVNWLYQDLLLELYVWDCRLHQLVDCTLAENAIVANGQTAAAAEADGIGERMSSIAPF ENRCIKEPEKFIEAGTASALLDDAWNDKHCNDQHNTNCECDGGEEKWIWNPVNESRLAFR QEVEVGCLERFEVVNHYCPSHLSPLHKHRESGEEMGGSPQFTVGPGGSILCVSEDEISSI ISRALAVSEERRHLLMDAVAETEPADTTRSKTMDKSYSSLSESSSASLWSSDSEASISSD DLSSYDTSLLLSSSLHPEIAVNGITALKGRYSVICVHSNQFYNLRRKCCPSELAYVASLS RCKRWDAQGGKSKAFFARTMDGRLIIKQIKKTEFESFIKFAPDYFRHVNHSLDTGSQTCL AKILGIYQVKQTRHGKEIKMDLMVMENILFGHNVSRTYDLKGAIFSRYVSDPNDHAGTVY LDQNFVDDMRVSPIYIGGRAKHLLERAIWNDTSFLTSINVMDYSLLVGVDRQKRELVFGI IDYLRQYTWDKQLETMVKASLVVPKNESPTVISPRDYKKRFRKFMSKHFLTVPDEWSTES RPPVAWESCAHAGELPGVKPQHPSPILLACA

Transcript Sequence

Transcript ID	Zm00001d002940_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:27630706:27636481:1 gene:Zm00001d002940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Sequence	TCATCGTCAGTTCAGGCTTCAGCTCGTCAGGCGAGAGAGAGAGAGAGAGATGCCCAGCTG CTTGCTGTCGTGTGATTTGGAGCTCGATTAATATTACCATGATTCTGCTGCACACAAGGT ACTCATCTGCGCGCCCCCGGCCCAGTCGTACTCTCTCTCTCTCTCTCTCTCTTTTTTCTT AGTACGTACGTCCTAGCTCGTGCAAGTTCATACAGCAGATGCTAGCTGCATTATAGGGAC GACGATGCCAAGCAGGATGAGGTTCGCATGATGGCCACCGCTGAATCGGACGACGACGCC ATCTGGGTACCGCCTGATGAGGCAGCAGCAGCAGCAGACAGCATGATGCAAGATGATGAT GATGATGATGATGATTACCATGCCGGAACCGGAGAGGAGGATGACGAATCCGAGGACGAC GATGATGCTACCAGCAGTATCTGCAGGTGGCGCCATGACTCTGATCATCAGTCCGCCGCC CACAGGGAGGAGCGGCAGAAAGCCATGCTGAGAGCCATGAACGGGCAGCTCAGAATGCTC GCCGCTCGCTTTCTAGAGTCGGCTGGCATTGATACCAGCAGCTGGCTTGATATCGTCATC TCCCTGTCCTGGGAAGCTGCCCTTGCCATCAAGCCTGATGTTGGCACTGCTGTAGGCAAC CAAATGGACCCTTCCTCATACATCAAGGTTAAGTGCCTAGCATCTGGGACACCCCGCCAA TGTGAGGTCGTCAAGGGCCTAGTCTTCAGGAAGAACGTCGCTCATAAGCACATGCCCACC AAGTGTCACAATCCCAGGCTGCTGCTTCTTAGTGGACTCCTCGGCCATTCCCATGTTGGC TTCTCATCGTTCAGTTCCATAGAGCAGGAGAAAGACCATCTGGACAAGTCTGTCTGCGAA ATGATGGAGATCTGCCGCCCAGATGTCGTCTTGGTCGAGAGAACGGTTTCACGCGACATA CAGGAGCTTCTTCTCAAGGAAGGTGTCACTCTAGTGCTTGACATGAAGCTCAACCGGCTG CAGAGGGTTGCTCGCTGCTCCGGCGCCCCCATAGTCTCGTTTTCAGAGGTTCTCAGCAAG CCAAAGCTGAAGCAGTGCGACTACTTCCACATTGAAAAGGTGACGGAGGAGCACAGCCTG ATTACCTGCAGCGCTGGAGTTGGAAGCAGGCCATCTAAAACATTAATGTTCCTGGAAGGC TTTCACAAGCCACTGGGATGCACGATATTGCTAAGGGGAGCAAATACTCAAGAACTGAAG AAAATCAAGCAGGTCATGAACTACACAGTGTTTGCAGCGTACCGCCTCGTTCTTGAGACA TCCTTCTTCGAAGATCAGAGACTAATCTTGAACAATAAGGATTCTTCCAAAGAAGAAGTT TCTGTCGCTAGGAAGGCCGGACCATCGTCACTAGGATCAGTACAGGAAACTACTGATTCC AATGCTCTAAATCCACTCGACAAGGGCTTCCCTAATCAAGCACTACTCCCTTCTGAAGGA CTAGTAGTATCAGCAGTCCCAGAATCACCCAGAAGATTCATTGATATACTCCGTTATCAT AATATTTATTTGCCGGTCACTTCTTCTCAAGAGGCAACTGATCATCAGATACAAGACAGT ATCCATATCAGCCCAAACGTTGGAGTACCAATTGGTTCTGTTGAGAGTGTGGATCATTTA AGCGATCCCCAGGAACAAGCATCCTCTGAAACCAATCAGCAAATGGCATTGGACGGCCCT TCGGTTAGTGAAAAACATGAGCAGTCATTGGAAAATATTAAAACATCTGATACAGATGAG GTGGACGATGTGTTGGAGTCTCAGAGCATACTTATTTTGCTGTCTAGCCAGTGTATCACA AAGCAGGTTATCTGCGAGCAGAGCCGTCTATCCCGTATAAGATACTACGGGAATTTTGAT GTTTCCTTAGGACGCTATTTGCAAGACATTTTGCAGAAGCAGAATCTCAGCTGTTCCTCA TGTGGAGAGCCTCCAGAGGCTCACATGTATTCCTACACTCACCGCAATGGGAATCTGACT GTTCTTGTGAGGCACTTGCTGCCTAAATATCGTTTACCTGGTGAATCAGAAGGAAAGATT TGGATGTGGACTAGATGCTTAAGGTGTGAACGTGAAAGTGGGATCTCCAGATCATCACGA AGGGTGATAATGTCAGCTGAAGCACACTACCTTTCATTTGGGAAGTTCCTTGAACTCAGT TTTTCAAACCACTCAACCGCTAGAAGGCTGTCAATATGCGGGCATTCACTCAATACCGAT TGTCTGCGCTTTTTTGGGTTGGGCTCCAAAGTTGCAATGTTCCAGTATTCCTCAGTCGAA ATTTACAATGCCTGCAAACCACAGCCTACTCTTGAGTTTCACAATCCCGATATGCACGAG TGGTACGGGCAAGAGGTACGAAATGTTCTTGCCACAGGAGTTACACTTTTCTCGGAAGTC ACAAGCGCACTACAGAAGCTCAAGGATCAGTTTCCTGTTAAAGACCTTTCCCAACTTGAA GAGATGTTGATTAAAGAGAAGGCTGAGTTCATGGATTCTCTAGCAAAGACTGTTGATCGA AATAGGGAATCAAGCTCTGTGGATGATATCCTTAATGTAAATTGGCTCTATCAGGATCTT CTACTGGAACTTTATGTGTGGGACTGCCGGCTGCACCAACTTGTAGATTGTACACTTGCT GAAAACGCAATAGTGGCAAATGGCCAAACTGCAGCAGCCGCTGAAGCAGACGGAATCGGT GAGCGCATGAGCAGCATAGCACCTTTTGAGAATAGATGTATCAAGGAACCAGAGAAGTTC ATTGAAGCAGGGACTGCATCAGCCTTGCTTGATGATGCATGGAATGATAAGCATTGCAAT GATCAGCACAACACAAACTGTGAGTGTGACGGGGGGGAAGAAAAATGGATTTGGAACCCA GTGAATGAGTCCAGATTGGCTTTCAGGCAGGAAGTGGAAGTTGGATGTTTGGAAAGGTTT GAGGTCGTTAACCACTACTGTCCAAGTCATTTATCCCCCTTGCACAAACACAGAGAATCT GGCGAGGAGATGGGGGGATCTCCACAGTTCACAGTAGGTCCAGGTGGCAGTATCTTGTGT GTATCAGAGGATGAGATATCCAGTATAATATCACGAGCTCTTGCTGTATCCGAGGAACGT CGGCACTTACTGATGGATGCTGTCGCTGAGACTGAACCAGCAGATACCACCAGGAGTAAA ACAATGGACAAGTCTTACAGCTCTTTATCTGAAAGTTCATCTGCTTCTCTGTGGTCTTCG GATTCTGAGGCAAGCATTTCGTCTGACGACCTCTCCAGCTATGATACCTCGCTTCTTCTA TCGTCCTCTCTCCATCCAGAAATAGCTGTCAACGGGATAACAGCTCTCAAAGGGAGGTAC TCGGTCATCTGTGTACACTCTAACCAGTTCTACAACCTCCGAAGGAAATGCTGCCCATCG GAGCTTGCATACGTTGCCTCATTGAGCCGTTGCAAGAGGTGGGATGCTCAGGGCGGGAAG AGCAAGGCATTCTTTGCAAGAACAATGGATGGCAGGCTCATCATAAAGCAAATAAAGAAG ACAGAGTTTGAGTCCTTCATAAAATTTGCGCCTGATTACTTCAGGCATGTCAACCATTCT CTGGACACGGGGAGCCAGACTTGCCTTGCCAAAATCTTAGGGATCTATCAGGTGAAGCAG ACAAGACATGGCAAGGAGATCAAGATGGATCTGATGGTGATGGAGAACATCTTGTTTGGA CACAATGTGTCGCGGACATATGATCTGAAAGGCGCCATCTTTTCACGTTATGTCTCCGAC CCAAATGACCATGCTGGCACTGTCTACTTGGACCAGAACTTTGTGGATGACATGCGTGTT TCTCCAATCTATATTGGTGGAAGAGCAAAGCATCTCTTGGAGCGGGCAATCTGGAACGAC ACGTCTTTTCTCACGTCCATCAATGTCATGGACTACTCTTTGCTGGTTGGAGTGGACAGG CAGAAGCGTGAGCTGGTATTCGGCATCATCGACTACCTGAGGCAGTATACATGGGACAAG CAGCTGGAGACGATGGTGAAAGCGTCTCTGGTGGTGCCCAAGAATGAATCGCCAACGGTG ATTTCCCCAAGGGATTACAAGAAGAGGTTCAGGAAGTTCATGAGCAAGCACTTCCTCACA GTTCCCGACGAGTGGAGCACGGAGAGTCGGCCGCCGGTGGCCTGGGAGTCCTGTGCCCAC GCCGGCGAGTTGCCGGGAGTGAAGCCCCAGCATCCAAGCCCAATCCTCCTGGCGTGCGCT TAATTCAATTTCACATTCTGATGCTGGCGAATAGTGTCACAAATGGAAGGAGGAAACGAT GCTTGTACGAAGTTCCAGTTTACTACCCTCACCACACACGCACGCACGAGTACATATATA ATTCTCTCTTCAACAAGTGAAGAGAAGGCCTAGCACCATTGCTAAACCTTTTCTTGCTTC TCGTCCACAACAAGGGGAATCATCTCCGTCTGATTCCTTGCTTGCGCTGTTCCTAGACTC CCTGGGGCTGCAGCCTGCCGCTGCGAGATCAGATGCCTCACGTAGCCATAGAAAGTGCAA CCAACCAGGGTGATTCCACACCCGATTGCATTCATTGCAGAGATTGGATTCCGGAAGATC GACCACGACACTAACACTGCCACCGCGACCTACATTTTAAGGTTGCCTGCAACGTTGAAC GTCACTGCTGTTGTTGAATGGATGACGTAGAAGATGGAGAAGTTAAGGCAGAACGCAAGC ACCCCCGAACCTAGGATGATAGTCAGCGCAGGAACGATGGAATCATGTGTGTAGAACCAG TTCATTACACCTCCTCCTTCAAGCACCATCGCTGGTAGAGCCAGTATCATGGTGGCAAAG GGTGCCATGTAGTACACCGTGTTAATGCTGCACGAAATAGAACAGACCTTACTGAT