Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002929_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:26786830:26791581:-1 gene:Zm00001d002929 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 5 description:Auxin response factor 17
Sequence

ATGGGGCCACAGCCACCGCTTCACCTTCCCGCCGCCAACGGCGACAGCATCGTCGACCGC
GACGTTTGGCTCGCCTGCGCCGTCCCGCTCTCCCGCCTCCCCGCCGTCGGTGCCGAGGTC
TACTACTTCCCGCACGGCCACGCCGAGCAGTGCCCCGCGCATCTCCCGGCGCCGCTCCCG
GCGCCGCACCTCTTCCCTTGCACCGTCGCCGGCGTCAGCCTTGGCGCGGACGACGAGACC
AACGAGGTGTTCGCCAAAATCTCCCTCAGCCCAGGCCCCCACCGCGGGCCCGCCGCCGCT
TGTCGTACCGACCCCACCAGCGACTGCCCGCCGCAGGAGCTCAGTTACTTCACCAAGGAG
CTCACGCAGAGCGACGCCAACAACGGCGGCGGATTCTCCGTCCCGCGCTACTGCGCCGAC
CACATCTTCCCCACGCTCGACTTCGACGCCAACCCGCCCGTGCAGAAGCTTTTCATGCGC
GACACCAGGGGCAACCCGTGGCAGTTCCGCCACATCTACCGCGGCACGCCACGCCGCCAC
CTGCTTACCACCGGCTGGAGCAGGTTCGTCAACGCCAAGCTGCTCGTCGCGGGGGACATC
GTCGTCTTCATGCGCCGCCACAACGGCGACCTCATCGTCGGCCTGCGCCGCACGCCCAGG
TACCCGCTCGTCTTCCCCAGGGTCGGGTCCGGAGCCGGGGTCGACCCGGACCAGCCCCCG
CCCCGCAACGCGCGCGCGCGGGTACCGCCCCAGGACGTCATTGAGGCCGCACGCCTCGCC
GCGGAGGGCAGGTCCTTCGCGGTCACCTACTTCCCGAGACAGGCCGCCGGGGAGTTCATC
GTCCCGCGCGACGAGGTGGAGGGCGTGCTCGCCACCCGCTGGGAGCCAGGCGCGCAGGTG
CGTATGCAGGTCATGGAGGCCGAGGACACGCGGCGCACCGTGTGGGCCGACGGCCACGTC
AAGTCGCTCCACCAAAACATCTGGCGAGCGCTCGAGATCGACTGGGATGATTCCTCTCCA
TTATCACCAAATCTGAGCAGATTTGTGAATGCTTGGCAAGTCGAGCTTGTTACACACCCT
CCTCTTCCAAATGGAGCGAGGATCTGCAACCCAATTGCGTCTCTTTGCCATGGAGATGTC
TCTTATCCACTGATCGGATCGGAAATCCAGGGGCCACCAATTCCTGCTAGCATGCAGGGA
GCCAGGCACACCGGCCCTTGTGCTGCGCCCTCTGAATCTTCTGCAGTGCTCACGAATCGG
GTACTGTTCCCCCTGCTCAACCCGGACCTCCAGATGCCACCGTTTACAAGCCCCAGTGAT
TCCTCTGAGATTCTGGATCCTGAATCTGCTTCTCCTCCCAACAAATCAGTAAGGTTGCCT
CCAGCAGAGCTTCCAGTCCAAGTGAAGAGCATACAGCTCTTTGGCGCCACAATCATGGTC
CATGTTGTGCGAAGTGTTGCCTGTGGTGGTTGTTGTGAAGAACTGAATGGAGCTCCTAGT
GGTGATGCTACGGCTGATGGCAGTGTCGGAAAAGATGTCTAA

Peptide Sequence

PEP ID

Zm00001d002929_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:26786830:26791581:-1 gene:Zm00001d002929 transcript:Zm00001d002929_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 5 description:Auxin response factor 17
Sequence

MGPQPPLHLPAANGDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLP
APHLFPCTVAGVSLGADDETNEVFAKISLSPGPHRGPAAACRTDPTSDCPPQELSYFTKE
LTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRH
LLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPP
PRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQV
RMQVMEAEDTRRTVWADGHVKSLHQNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHP
PLPNGARICNPIASLCHGDVSYPLIGSEIQGPPIPASMQGARHTGPCAAPSESSAVLTNR
VLFPLLNPDLQMPPFTSPSDSSEILDPESASPPNKSVRLPPAELPVQVKSIQLFGATIMV
HVVRSVACGGCCEELNGAPSGDATADGSVGKDV

Transcript Sequence

Transcript ID

Zm00001d002929_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:26786830:26791581:-1 gene:Zm00001d002929 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 5 description:Auxin response factor 17
Sequence

CCGACGAATCCTCCATCCCGCGCAGCATCTCCTCCCTCCCTCCCTCCGCTCCGTCCGCGT
CGCCAAACCCTAGTAGTACGTTGTACAGGACAATGGGGCCACAGCCACCGCTTCACCTTC
CCGCCGCCAACGGCGACAGCATCGTCGACCGCGACGTTTGGCTCGCCTGCGCCGTCCCGC
TCTCCCGCCTCCCCGCCGTCGGTGCCGAGGTCTACTACTTCCCGCACGGCCACGCCGAGC
AGTGCCCCGCGCATCTCCCGGCGCCGCTCCCGGCGCCGCACCTCTTCCCTTGCACCGTCG
CCGGCGTCAGCCTTGGCGCGGACGACGAGACCAACGAGGTGTTCGCCAAAATCTCCCTCA
GCCCAGGCCCCCACCGCGGGCCCGCCGCCGCTTGTCGTACCGACCCCACCAGCGACTGCC
CGCCGCAGGAGCTCAGTTACTTCACCAAGGAGCTCACGCAGAGCGACGCCAACAACGGCG
GCGGATTCTCCGTCCCGCGCTACTGCGCCGACCACATCTTCCCCACGCTCGACTTCGACG
CCAACCCGCCCGTGCAGAAGCTTTTCATGCGCGACACCAGGGGCAACCCGTGGCAGTTCC
GCCACATCTACCGCGGCACGCCACGCCGCCACCTGCTTACCACCGGCTGGAGCAGGTTCG
TCAACGCCAAGCTGCTCGTCGCGGGGGACATCGTCGTCTTCATGCGCCGCCACAACGGCG
ACCTCATCGTCGGCCTGCGCCGCACGCCCAGGTACCCGCTCGTCTTCCCCAGGGTCGGGT
CCGGAGCCGGGGTCGACCCGGACCAGCCCCCGCCCCGCAACGCGCGCGCGCGGGTACCGC
CCCAGGACGTCATTGAGGCCGCACGCCTCGCCGCGGAGGGCAGGTCCTTCGCGGTCACCT
ACTTCCCGAGACAGGCCGCCGGGGAGTTCATCGTCCCGCGCGACGAGGTGGAGGGCGTGC
TCGCCACCCGCTGGGAGCCAGGCGCGCAGGTGCGTATGCAGGTCATGGAGGCCGAGGACA
CGCGGCGCACCGTGTGGGCCGACGGCCACGTCAAGTCGCTCCACCAAAACATCTGGCGAG
CGCTCGAGATCGACTGGGATGATTCCTCTCCATTATCACCAAATCTGAGCAGATTTGTGA
ATGCTTGGCAAGTCGAGCTTGTTACACACCCTCCTCTTCCAAATGGAGCGAGGATCTGCA
ACCCAATTGCGTCTCTTTGCCATGGAGATGTCTCTTATCCACTGATCGGATCGGAAATCC
AGGGGCCACCAATTCCTGCTAGCATGCAGGGAGCCAGGCACACCGGCCCTTGTGCTGCGC
CCTCTGAATCTTCTGCAGTGCTCACGAATCGGGTACTGTTCCCCCTGCTCAACCCGGACC
TCCAGATGCCACCGTTTACAAGCCCCAGTGATTCCTCTGAGATTCTGGATCCTGAATCTG
CTTCTCCTCCCAACAAATCAGTAAGGTTGCCTCCAGCAGAGCTTCCAGTCCAAGTGAAGA
GCATACAGCTCTTTGGCGCCACAATCATGGTCCATGTTGTGCGAAGTGTTGCCTGTGGTG
GTTGTTGTGAAGAACTGAATGGAGCTCCTAGTGGTGATGCTACGGCTGATGGCAGTGTCG
GAAAAGATGTCTAAACCATGCACCTGTACTTGAAGATGCCTTTTAAGTCTGGGAGTGTGG
GTTTCTACTACCAAAGTACAAGTGTTGGTGCATGCAGAGTTTATCTGTAGCTACATTTAG
TAGGCTGTGGGGGGAGTATTACCGTTGCAAGTTGCAACCCATGGCTGTAGTTTAGTTAAC
AGAACACTTCATATTGTTGGTTGGTTGATTCAATTCTGGGAGTTTGGTCGTATCACTTTC
TTCTGCTCTGCTGTTGCAATTGCATTGCGCGCAACTATATGTGGGTTTAATTTGGTAATG
ATATGGGTCAATGACCCTTCCCCCGCTAATTAA