Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002881_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:25550488:25552575:-1 gene:Zm00001d002881 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGGAGCGGCAGAAGATGATCGCCGGCCTCCTCAGGGCAAGCGCGAGAAGCTCGTCGCTC CGCGGCGGCGTCCAGCTGCACGGCGCCATAACGAAGATGGGGTTCGGATCGGACACCATG CTGGGCAACAACCTGATCGACATGTACGTCAAGTGCGGGGAGCTGGACCTGGCGTGCGAG GTGTTCGGCGGAATGCGCGACAGGAACGTGGTCTCCTGGACGGCGCTCATGGTGGGCTTC CTGCGGCACGGCGACGCCACGGGCTGCCTCAGGCTGCTCGGCGAGATGCGGACCGCCTCC GAGGCGGCGCCGAACGAGTACACGCTCTCCGCGAGCCTCAAGGCCTGCTGCGTCGTCGGT GACACGGCTGCGGGCGTCGGGATCCACGGGCTCTGCGTCCGGGCAGGGTACCAGGAGCAC GACGTCGTCGCCAGCTCGCTGGTGCTCGTCTACTCCAAGGGCGGGAGGATCGGCGACGCG CGGCGTGTGTTTGACGGCGCCGGGCTCGGGAGTGGCATCGCCACCTGGAACGCCATGGTC TCCGGGTACGCGCACGCCGGCCACGGCAGGGACGCGCTGCTCGTGTTCCGGGAGATGCGG CGGCATGAGGGTCAGCATCAGCCTGACGAGTTCACCTTTGCCAGCCTGCTCAAAGCCTGC AGCGGTCTTGGCGCGACACGCGAGGGCGCGCAGGTTCACGCGGCCATGACGGCAAGCGGG TTCTCGACGGCCTCCAACGCTATCCTCGCCGGCGCGCTGGTCGACATGTACGTCAAATGC CGGCGCTTGCCGGTGGCGATGCAAGTGTTCGAGAGGCTGGAGCGGAAGAACGTCATCCAG TGGACGGCGGTGGTCGTCGGGCACGCGCAGGAGGGGCAGGTGACGGAGGCGCTGGAGCTG TTCCGGCGGTTCTGGCGCTCCGGCGCCCGACCCGATTCCCACGTTCTGTCCAGCGTCGTC GGCGTGCTCGCGGACTTCGCGCTAGTCGAGCAGGGCAGGCAGGTGCACTGCTACGGCATC AAGGACCCGACCGGGACGGACGTGTCCGCGGGCAACTCCATCGTCGACATGTACCTCAAG TGCGGGCTGCCCGACGAGGCGGAGCGGATGTTCCGGGAGATGCGGGCGCCGAACGTCGTC TCGTGGACGACGATGGTCAATGGCCTCGGGAAGCACGGGCTTGGCCGTGAAGCCGTCGCC TTGTTCGAGGAAATGCGAGCGGGAGGCGTGGAGCCCGACGAGGTGACCTACCTGGCGCTG CTGTCGGCGTGCAGCCACGCCGGCCTAGTCGACGAGTGCCGCCGGTATTTCTCCTGCATC CGGCGGGACCGGACGGTGAGGCCGAAAGCGGAGCACTACGCGTGCATGGTCGACCTCCTC GGCCGCGCCGGGGAGCTCAGGGAGGCGAGGGACCTCATCCGGACGATGCCGATGGAGCCG ACCGTCGGCGTATGGCAGACCCTCCTGAGCGCGTGCAGGGTGCACAAGGACGTCGCCGTC GGCAGGGAGGCAGGCGACGTCCTCCTGGCCATGGACGGCGACAACCCGGTGAACTACGTC ACGCTGTCCAACGTCCTCGCGGAGGCGGGGGAGTGGCGCGAGTGCCACAAGGTGAGGGAC GCCATGAGGCGCAGGGGGCTCAAGAAGCAGGGCGGGTGCAGTTGGGTGGAGGTCGGCAAG GAGGTGCACTTCTTCTACGGCGGCGGCGGTGAAGAGGAGACGCACCCGCAGGCCGGCGAC ATCCGCCGCGTCCTGAGGGACATGGAGACGAGGATGCGGGAGCAGCTTGGGTACAACGCC GACGACGCGCGCTTCGCTCTGCACGACGTCGACGAGGAGTCCCGAGCGGAGAGCCTGAGG GCGCACAGCGAGAGGCTCGCCGTCGGCCTGTGGCTGCTGCGCAACGGCGTAGACGGCGGC GGGCACGGGGAGCCGATCAGGGTGTACAAGAACCTGCGGGTGTGCGGGGACTGCCACGAG TTCTTCAAGGGGCTGTCGGCCGTCGTGAGGAGGGCGCTAGTAGTCAGAGACGCCAACAGG TTCCACAGGTTTGAGCATGGCTCCTGCTCGTGCAAGGACTACTGGTGA

Peptide Sequence

PEP ID	Zm00001d002881_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:25550488:25552575:-1 gene:Zm00001d002881 transcript:Zm00001d002881_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MERQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACE VFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVG DTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMV SGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASG FSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALEL FRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLK CGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLAL LSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEP TVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRD AMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNA DDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHE FFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW

Transcript Sequence

Transcript ID	Zm00001d002881_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:25550488:25552575:-1 gene:Zm00001d002881 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGGAGCGGCAGAAGATGATCGCCGGCCTCCTCAGGGCAAGCGCGAGAAGCTCGTCGCTC CGCGGCGGCGTCCAGCTGCACGGCGCCATAACGAAGATGGGGTTCGGATCGGACACCATG CTGGGCAACAACCTGATCGACATGTACGTCAAGTGCGGGGAGCTGGACCTGGCGTGCGAG GTGTTCGGCGGAATGCGCGACAGGAACGTGGTCTCCTGGACGGCGCTCATGGTGGGCTTC CTGCGGCACGGCGACGCCACGGGCTGCCTCAGGCTGCTCGGCGAGATGCGGACCGCCTCC GAGGCGGCGCCGAACGAGTACACGCTCTCCGCGAGCCTCAAGGCCTGCTGCGTCGTCGGT GACACGGCTGCGGGCGTCGGGATCCACGGGCTCTGCGTCCGGGCAGGGTACCAGGAGCAC GACGTCGTCGCCAGCTCGCTGGTGCTCGTCTACTCCAAGGGCGGGAGGATCGGCGACGCG CGGCGTGTGTTTGACGGCGCCGGGCTCGGGAGTGGCATCGCCACCTGGAACGCCATGGTC TCCGGGTACGCGCACGCCGGCCACGGCAGGGACGCGCTGCTCGTGTTCCGGGAGATGCGG CGGCATGAGGGTCAGCATCAGCCTGACGAGTTCACCTTTGCCAGCCTGCTCAAAGCCTGC AGCGGTCTTGGCGCGACACGCGAGGGCGCGCAGGTTCACGCGGCCATGACGGCAAGCGGG TTCTCGACGGCCTCCAACGCTATCCTCGCCGGCGCGCTGGTCGACATGTACGTCAAATGC CGGCGCTTGCCGGTGGCGATGCAAGTGTTCGAGAGGCTGGAGCGGAAGAACGTCATCCAG TGGACGGCGGTGGTCGTCGGGCACGCGCAGGAGGGGCAGGTGACGGAGGCGCTGGAGCTG TTCCGGCGGTTCTGGCGCTCCGGCGCCCGACCCGATTCCCACGTTCTGTCCAGCGTCGTC GGCGTGCTCGCGGACTTCGCGCTAGTCGAGCAGGGCAGGCAGGTGCACTGCTACGGCATC AAGGACCCGACCGGGACGGACGTGTCCGCGGGCAACTCCATCGTCGACATGTACCTCAAG TGCGGGCTGCCCGACGAGGCGGAGCGGATGTTCCGGGAGATGCGGGCGCCGAACGTCGTC TCGTGGACGACGATGGTCAATGGCCTCGGGAAGCACGGGCTTGGCCGTGAAGCCGTCGCC TTGTTCGAGGAAATGCGAGCGGGAGGCGTGGAGCCCGACGAGGTGACCTACCTGGCGCTG CTGTCGGCGTGCAGCCACGCCGGCCTAGTCGACGAGTGCCGCCGGTATTTCTCCTGCATC CGGCGGGACCGGACGGTGAGGCCGAAAGCGGAGCACTACGCGTGCATGGTCGACCTCCTC GGCCGCGCCGGGGAGCTCAGGGAGGCGAGGGACCTCATCCGGACGATGCCGATGGAGCCG ACCGTCGGCGTATGGCAGACCCTCCTGAGCGCGTGCAGGGTGCACAAGGACGTCGCCGTC GGCAGGGAGGCAGGCGACGTCCTCCTGGCCATGGACGGCGACAACCCGGTGAACTACGTC ACGCTGTCCAACGTCCTCGCGGAGGCGGGGGAGTGGCGCGAGTGCCACAAGGTGAGGGAC GCCATGAGGCGCAGGGGGCTCAAGAAGCAGGGCGGGTGCAGTTGGGTGGAGGTCGGCAAG GAGGTGCACTTCTTCTACGGCGGCGGCGGTGAAGAGGAGACGCACCCGCAGGCCGGCGAC ATCCGCCGCGTCCTGAGGGACATGGAGACGAGGATGCGGGAGCAGCTTGGGTACAACGCC GACGACGCGCGCTTCGCTCTGCACGACGTCGACGAGGAGTCCCGAGCGGAGAGCCTGAGG GCGCACAGCGAGAGGCTCGCCGTCGGCCTGTGGCTGCTGCGCAACGGCGTAGACGGCGGC GGGCACGGGGAGCCGATCAGGGTGTACAAGAACCTGCGGGTGTGCGGGGACTGCCACGAG TTCTTCAAGGGGCTGTCGGCCGTCGTGAGGAGGGCGCTAGTAGTCAGAGACGCCAACAGG TTCCACAGGTTTGAGCATGGCTCCTGCTCGTGCAAGGACTACTGGTGA