Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002854_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:24772447:24776140:1 gene:Zm00001d002854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin M1 chloroplastic
Sequence

ATGGCCGCCGGCCTCGCCTTCCCCGTCGCCTCCTTTCCACTCGCCTGCGTCTCCTCACCT
CCCCACCCCGGGCACCGCATCTGCTGCGCGATCCCGTCGTCGTCCTCGCGCCGCACCGTC
AAATCCTCGCCGCTCCGCGCGACTACCGTCCTCTCCAGGGAACGACGGGGCACGGGCCGT
GGCGCGTCCGTAGTGTGCGCTGTCCAAGGCCAGGACACGACCATCCAAGTCCCAGATGTG
ACAAAGTCAACATGGCAATCACTCGTGATCGAGAGCGAGCTTCCTGTCCTGGTTGAGTTC
TCGGCGGCATGGTGCGGGCCATGCAAGATGATAGAACCAGTTGTTGGCAAGCTCTCGAAG
GACTACGAGGGGAAGCTGAAATGCTACAAGCTAAACACAGATGAGAGCCCGGACATCGCA
AGCCAGTACGGGGTCCGGAGCATCCCCACCACGATGATCTTCAAGGATGGCGAGAAGAAG
GATTCGGTTATCGGGGCCGTGCCAGAGAGCACACTGGTCACATGCATCGAGAAATTTGTC
GAGAGGTAG

Peptide Sequence

PEP ID

Zm00001d002854_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:24772447:24776140:1 gene:Zm00001d002854 transcript:Zm00001d002854_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin M1 chloroplastic
Sequence

MAAGLAFPVASFPLACVSSPPHPGHRICCAIPSSSSRRTVKSSPLRATTVLSRERRGTGR
GASVVCAVQGQDTTIQVPDVTKSTWQSLVIESELPVLVEFSAAWCGPCKMIEPVVGKLSK
DYEGKLKCYKLNTDESPDIASQYGVRSIPTTMIFKDGEKKDSVIGAVPESTLVTCIEKFV
ER

Transcript Sequence

Transcript ID

Zm00001d002854_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:24772447:24776140:1 gene:Zm00001d002854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin M1 chloroplastic
Sequence

CAGAGTCACACAGGGGAACTGCGAACTGGATCCAAAATTCGGAACTACCAGTGGCAGACT
GGCAGTACAGGCTACCAGCCCACATGCTTTTCTTTCCCTCCCGTTCCCCGTCTGTCTCCC
TCTCGTCGCATCGCGCACCGCTTCCCCAGTTCCCCCAGCTCCCCCCACCTTCCGTTGCCT
TCTCGAACTCAACCCCCGCCCCCGTCGCGGATCGTCATGGCCGCCGGCCTCGCCTTCCCC
GTCGCCTCCTTTCCACTCGCCTGCGTCTCCTCACCTCCCCACCCCGGGCACCGCATCTGC
TGCGCGATCCCGTCGTCGTCCTCGCGCCGCACCGTCAAATCCTCGCCGCTCCGCGCGACT
ACCGTCCTCTCCAGGGAACGACGGGGCACGGGCCGTGGCGCGTCCGTAGTGTGCGCTGTC
CAAGGCCAGGACACGACCATCCAAGTCCCAGATGTGACAAAGTCAACATGGCAATCACTC
GTGATCGAGAGCGAGCTTCCTGTCCTGGTTGAGTTCTCGGCGGCATGGTGCGGGCCATGC
AAGATGATAGAACCAGTTGTTGGCAAGCTCTCGAAGGACTACGAGGGGAAGCTGAAATGC
TACAAGCTAAACACAGATGAGAGCCCGGACATCGCAAGCCAGTACGGGGTCCGGAGCATC
CCCACCACGATGATCTTCAAGGATGGCGAGAAGAAGGATTCGGTTATCGGGGCCGTGCCA
GAGAGCACACTGGTCACATGCATCGAGAAATTTGTCGAGAGGTAGAATGCGTAGTGGATC
TCTTGAGCGGTTTCCTTTAAATCAAAAGGTCATTTCGAGACCACTTGGGCCATACAGAAC
AATTCTATAACTGCCTCTAGATGATGGGATTATATGTATATTATATACTCTGTTATTATT
GTTTGAAGAAAGCGGCATGAAATTTGTGTCCACCCCAGCCTTGGTTTTGTTTTCTTATTC
TTTAGAGGCTCTGAACTGTGTAACGTGGACGACCGAGAACCTCGTTCTATTCTTCTCATA
ATATATAAGAATGCACACATGAAACATCATTCCTTAT