Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002853_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:24768631:24772160:1 gene:Zm00001d002853 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable beta-D-xylosidase 6
Sequence

ATGCTCGTCGCCCTCCTCTGCCTCCTCGCCTGCTGCGCCGGCGCCGGCGCAGCAGGCGCC
GCCGCGCCGAACGCGCGCCCGTGCGCGTCGCCCTACTCGACCAGCGCCTACCCGTTCTGC
GACGCGTCGCTCTCCATCCCGGCCCGCGCGCGCGCGCTCGTCTCGCTGCTCACCCTGGAC
GAGAAGATCGCGCAGCTGTCCAACACGGCGGGCGGCGTCCCGCGCCTGGGCATCCCGCCC
TACCAGTGGTGGTCCGAGTCGCTCCACGGCCTCGCCGACAACGGGCCCGGGGTCAACTTC
TCCTCGGGCCCCGTCCGCGCCGCCACCGACTTCCCGCAGGTCATCCTGTCCACCGCCGCC
TTCAACCGCTCGCTGTGGCGCGCGGTCGCCGAGGCCGTCGCCACGGAGGCCCTCGGCATG
CACAACGCCGGCCAGGCCGGCCTCACGTATTGGGCGCCTAACATCAACATCTTCCGAGAC
CCAAGGTGGGGCCGCGGCCAGGAGACGTCCGGGGAGGACCCCGCTGTCGCTGCCGCGTAC
TCCCTCGAGTATGTCAAGGGTTTCCAGGGAGAGGAAGGAGAGGAAGGCAGAATCAGGCTC
TCTGCGTGCTGCAAGCACTATACAGCGTATGACATGGAGAAATGGGAAGGCTTCTCGCGG
TACACCTTCAATGCCAAGGTAAATGCACAAGATTTGGAAGACACGTACCAGCCGCCTTTC
AAGACCTGCATCCAGGAGGCTCGTGCTAGCTGCTTGATGTGTGCATATAACCAGGTCAAT
GGTGTGCCTATGTGTGCTCACAAAGATCTTCTGCAGAAGACCAGGGATGAATGGGGGTAC
ATTACATCTGATTGTGATGCTGTGGCAATTATTCATGAAAACCAGACATACACTAAATCA
GGCGAAGATTCAATAGCAATTGTTCTTAAGGCAGGAATGGATATCAACTGTGGTTCTTTC
CTAGTTCGGCATACTAAGTCAGCAATTGAGAAGGGAAAAATTCAAGAAGAAGATATCGAC
CGTGCCCTTTTTAATCTATTCTCGGTTCAGTTGCGTCTTGGAATATTTGATAAGCCCAGC
AACAACCAATGGTTCTCTCAACTAGGGCCCAACAGTGTGTGCACGAAAGAGCATAGAGAG
CTTGCAGCAGAAGCTGTAAGGCAGGGTGCTGTCCTTCTGAAGAATGACCATAATTTTTTG
CCTCTGAAGAGAAGCGAAGTTAGACATGTTGCCATCATTGGACCATCTGCAAATGACGCG
TATGCGATGGGCGGAGACTATACAGGTGTTCCCTGCAATCCTACGACCTTCCTTAAGGGC
ATTCAAGCATATGCTACACAAACAAGCTTTGCCCCTGGATGCAAGGATGCTTCCTGTAAC
TCAACAGATTTGTTTGGCGAAGCTGTTGAAGCAGCTAAAAGAGCCGATATTGTTGTCGTA
ATTGCTGGCTTGAACCTGACAGAAGAGCGTGAGGACTTCGACAGAGTGAGCCTTCTCCTT
CCAGGCAAGCAGATGGGCCTCATACATGCCATTGCTAGTGTAGCGAAGAAGCCCCTTGTG
TTGGTTCTCCTGGGTGGTGGTCCTGTTGATGTTTCGTTTGCAAAGCAAGATCCACGAATC
GCAAGCATTCTTTGGCTCGGATATCCTGGCGAGGTTGGTGGACAAGTCCTTCCAGAAATT
CTTTTCGGAGAGTACAACCCAGGAGGAAAGCTGCCTATAACTTGGTATCCTGAATCCTTT
ACTGCTATTCCCATGACTGATATGAACATGAGAGCTGATCCTTCACGAGGCTACCCTGGG
AGAACATATCGATTTTACACTGGAGATGTAGTGTATGGCTTTGGATATGGTTTAAGTTAC
TCCAAATATTCATATAGCATCTCCTCGGCTCCGAAGAAGATCACCGTGTCGCGTTCATCC
GATTTGGGCATTATCAGCAGAAAGCCTGCATACACAAGGAGGGATGGACTAGGCTCTGTG
AAAACTGAAGATATCGCTTCATGTGAAGCTCTGGTTTTCTCTGTTCACGTCGCTGTTTCG
AATCATGGTAGCATGGATGGGAGTCATGCTGTTCTTCTGTTCGCGAGATCGAAATCAAGC
GTCCCGGGCTTTCCTATAAAACAGCTGGTTGGCTTTGAGAGTGTCCACACGGCGGCTGGC
AGTGCATCCAATGTGGAGATTACTGTTGACCCCTGCAAGCAAATGAGCGCAGCCAATCCT
GAAGGCAAAAGGGTACTTCTGTTGGGTGCCCATGTTCTAACGGTGGGTGATGAAGAGTTC
GAATTATCCATTGAACTCTGA

Peptide Sequence

PEP ID

Zm00001d002853_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:24768631:24772160:1 gene:Zm00001d002853 transcript:Zm00001d002853_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable beta-D-xylosidase 6
Sequence

MLVALLCLLACCAGAGAAGAAAPNARPCASPYSTSAYPFCDASLSIPARARALVSLLTLD
EKIAQLSNTAGGVPRLGIPPYQWWSESLHGLADNGPGVNFSSGPVRAATDFPQVILSTAA
FNRSLWRAVAEAVATEALGMHNAGQAGLTYWAPNINIFRDPRWGRGQETSGEDPAVAAAY
SLEYVKGFQGEEGEEGRIRLSACCKHYTAYDMEKWEGFSRYTFNAKVNAQDLEDTYQPPF
KTCIQEARASCLMCAYNQVNGVPMCAHKDLLQKTRDEWGYITSDCDAVAIIHENQTYTKS
GEDSIAIVLKAGMDINCGSFLVRHTKSAIEKGKIQEEDIDRALFNLFSVQLRLGIFDKPS
NNQWFSQLGPNSVCTKEHRELAAEAVRQGAVLLKNDHNFLPLKRSEVRHVAIIGPSANDA
YAMGGDYTGVPCNPTTFLKGIQAYATQTSFAPGCKDASCNSTDLFGEAVEAAKRADIVVV
IAGLNLTEEREDFDRVSLLLPGKQMGLIHAIASVAKKPLVLVLLGGGPVDVSFAKQDPRI
ASILWLGYPGEVGGQVLPEILFGEYNPGGKLPITWYPESFTAIPMTDMNMRADPSRGYPG
RTYRFYTGDVVYGFGYGLSYSKYSYSISSAPKKITVSRSSDLGIISRKPAYTRRDGLGSV
KTEDIASCEALVFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFESVHTAAG
SASNVEITVDPCKQMSAANPEGKRVLLLGAHVLTVGDEEFELSIEL

Transcript Sequence

Transcript ID

Zm00001d002853_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:24768631:24772160:1 gene:Zm00001d002853 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable beta-D-xylosidase 6
Sequence

GGCGAGCCACTCGACTCGAGCGCACGGCCAAATTGTTGGACCGAAATCCGGTTCCTCCCC
ACCGAACGGCTACGCATCCGCCATGCTCGTCGCCCTCCTCTGCCTCCTCGCCTGCTGCGC
CGGCGCCGGCGCAGCAGGCGCCGCCGCGCCGAACGCGCGCCCGTGCGCGTCGCCCTACTC
GACCAGCGCCTACCCGTTCTGCGACGCGTCGCTCTCCATCCCGGCCCGCGCGCGCGCGCT
CGTCTCGCTGCTCACCCTGGACGAGAAGATCGCGCAGCTGTCCAACACGGCGGGCGGCGT
CCCGCGCCTGGGCATCCCGCCCTACCAGTGGTGGTCCGAGTCGCTCCACGGCCTCGCCGA
CAACGGGCCCGGGGTCAACTTCTCCTCGGGCCCCGTCCGCGCCGCCACCGACTTCCCGCA
GGTCATCCTGTCCACCGCCGCCTTCAACCGCTCGCTGTGGCGCGCGGTCGCCGAGGCCGT
CGCCACGGAGGCCCTCGGCATGCACAACGCCGGCCAGGCCGGCCTCACGTATTGGGCGCC
TAACATCAACATCTTCCGAGACCCAAGGTGGGGCCGCGGCCAGGAGACGTCCGGGGAGGA
CCCCGCTGTCGCTGCCGCGTACTCCCTCGAGTATGTCAAGGGTTTCCAGGGAGAGGAAGG
AGAGGAAGGCAGAATCAGGCTCTCTGCGTGCTGCAAGCACTATACAGCGTATGACATGGA
GAAATGGGAAGGCTTCTCGCGGTACACCTTCAATGCCAAGGTAAATGCACAAGATTTGGA
AGACACGTACCAGCCGCCTTTCAAGACCTGCATCCAGGAGGCTCGTGCTAGCTGCTTGAT
GTGTGCATATAACCAGGTCAATGGTGTGCCTATGTGTGCTCACAAAGATCTTCTGCAGAA
GACCAGGGATGAATGGGGGTACATTACATCTGATTGTGATGCTGTGGCAATTATTCATGA
AAACCAGACATACACTAAATCAGGCGAAGATTCAATAGCAATTGTTCTTAAGGCAGGAAT
GGATATCAACTGTGGTTCTTTCCTAGTTCGGCATACTAAGTCAGCAATTGAGAAGGGAAA
AATTCAAGAAGAAGATATCGACCGTGCCCTTTTTAATCTATTCTCGGTTCAGTTGCGTCT
TGGAATATTTGATAAGCCCAGCAACAACCAATGGTTCTCTCAACTAGGGCCCAACAGTGT
GTGCACGAAAGAGCATAGAGAGCTTGCAGCAGAAGCTGTAAGGCAGGGTGCTGTCCTTCT
GAAGAATGACCATAATTTTTTGCCTCTGAAGAGAAGCGAAGTTAGACATGTTGCCATCAT
TGGACCATCTGCAAATGACGCGTATGCGATGGGCGGAGACTATACAGGTGTTCCCTGCAA
TCCTACGACCTTCCTTAAGGGCATTCAAGCATATGCTACACAAACAAGCTTTGCCCCTGG
ATGCAAGGATGCTTCCTGTAACTCAACAGATTTGTTTGGCGAAGCTGTTGAAGCAGCTAA
AAGAGCCGATATTGTTGTCGTAATTGCTGGCTTGAACCTGACAGAAGAGCGTGAGGACTT
CGACAGAGTGAGCCTTCTCCTTCCAGGCAAGCAGATGGGCCTCATACATGCCATTGCTAG
TGTAGCGAAGAAGCCCCTTGTGTTGGTTCTCCTGGGTGGTGGTCCTGTTGATGTTTCGTT
TGCAAAGCAAGATCCACGAATCGCAAGCATTCTTTGGCTCGGATATCCTGGCGAGGTTGG
TGGACAAGTCCTTCCAGAAATTCTTTTCGGAGAGTACAACCCAGGAGGAAAGCTGCCTAT
AACTTGGTATCCTGAATCCTTTACTGCTATTCCCATGACTGATATGAACATGAGAGCTGA
TCCTTCACGAGGCTACCCTGGGAGAACATATCGATTTTACACTGGAGATGTAGTGTATGG
CTTTGGATATGGTTTAAGTTACTCCAAATATTCATATAGCATCTCCTCGGCTCCGAAGAA
GATCACCGTGTCGCGTTCATCCGATTTGGGCATTATCAGCAGAAAGCCTGCATACACAAG
GAGGGATGGACTAGGCTCTGTGAAAACTGAAGATATCGCTTCATGTGAAGCTCTGGTTTT
CTCTGTTCACGTCGCTGTTTCGAATCATGGTAGCATGGATGGGAGTCATGCTGTTCTTCT
GTTCGCGAGATCGAAATCAAGCGTCCCGGGCTTTCCTATAAAACAGCTGGTTGGCTTTGA
GAGTGTCCACACGGCGGCTGGCAGTGCATCCAATGTGGAGATTACTGTTGACCCCTGCAA
GCAAATGAGCGCAGCCAATCCTGAAGGCAAAAGGGTACTTCTGTTGGGTGCCCATGTTCT
AACGGTGGGTGATGAAGAGTTCGAATTATCCATTGAACTCTGACAGGGATGTGCCAAGTC
CTACCATTTTATGGAGTTCAAAGTTGGGAATAATCTGATGAAACTTGTAAAGAAACACGT
TGTAAAGATTCATTATTGAGCTGGATGCGTGTACGGTAAACATGCTGTGACCTGTGAAGA
TTC