Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002819_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:23558124:23563875:1 gene:Zm00001d002819 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13c description:Autophagy-related protein 13a
Sequence	ATGTCCGGGATGTCCGACTCCGCTGGGGGTGTGCGCGCGGGCGCGGAGCTGATGGTGCAG CAGTTCCACCTCAAGGTGCTCCACGCCGTCCTCGCCGTGCGCACGCCGCGCCCGCACGCC TTCGCGGCGCCAGCGGCGGCGTCGTTCAGGCGGAGGGACAGGTGGTTCCATCTCCCGCTC CACGACCCGCCGCCGCCGCCCGAGGCGGCTGACCGCCTGGACGAGCTGGTCCCCGGGGAG CCGCTGGTGGTGGACGTCCTCCTGAGCCCCGCCGGTAGTGTGGGAGCCCGAGGGGAGGTG GTGGAGAGGTGGACTGTGGCGTGCGAGCCCTGGCCGGACGCCGCGGGCGGCGAGGAGGTT GCCGTGAACCGGGCGTACAAGCACTGCTTCACGCTGCTCAGGTCCGTCTACGCCGTGCTC CGCGTCCTCCCGGCGTACCGCATCTTCCGCCTCCTCTGCGCCAATCCCTCCTACAACTAC GAGATGGGCCACCGCGTCGACACCTTCGCCGAGCCCTTCTCGCGCCCCCAGGAGGCCGCC ATGCGTTCCCAACGCTTTGTTCCCGTCGAAACCCAGCTCGGCCGCCTCGTCGTTTCCGTC CAGTACCTTCCCAGCCTCGCCGCCTTCAACCTCGAGATCACCTCCCTTTCGCCCTCCAAG ATAATCCCAGACTACGTCGGCAGCCCAGCCGCTGAGCCCATGCGCGCCTTCCCGGCCTCG CTTACAGAAGCCACGGGCTCCGGCTTCCCACCATCTAATCAGCAGCAGCGCCCGCACAGC TGGGCTTCGCCTGTGTTCTGGTCGCACACGCCGGCACACCAGGCCAGGTTCTCGCCGCCT CCAGTGTTTTACGCGTCACCGACGCCATCGCCTCCCCACTTTCCACCCCGTCTCATGAGG TGGGAGTCTGCACCAATGCCCATACCACAGGTGAGCGAGAGGAGGAGCCCTGCACACCGC CAGAATATGCTACCACCACCTTCGACGAGAAGAGGAGACATGAGGGCAGCAGGTGCTCTA CAGTCTCCATCTGAGAGTGGCCGGTTGATTGGGAGGATGGAGGAACTTCGGATAGCTGAT CCATATGTGACCTCGTCACCCAGACATAAGGGCAAGGACACTAAAGATGGATCTGGCAGA TTCTCTGCACTCTCCTCATGCGATTCACCACGGCAAGATGATCTGGATGATGTGGATTAC CATTTCGACGTTGATGATGTTGATACTCCAGTCTCCCAACCTCGGAGAATTGATGGGAAG GAAACAGGTGATCAGGTTGGTTCATCATCCCATAAATCTCAAGACGCACAAGTAGGTTCT CTAGTCAACCTGCTGAGAAATGCCAGCCCGCTGCGAAATCCTAGCAATTCATCACAGATA TCAAGGGCCGAGTCCAGCGAAGTAGCCTCAGCAAGCTCGGTCACGTCCCGCAGGACATCT GACGCCCTTGAGGAGCTCCAGTCCTTCAAGGAGATAAGGGAGCGACTGCTGTTCCGGAGC AGCGCAAAACATCAAGAGCCACCAGGAAAACCATAA

Peptide Sequence

PEP ID	Zm00001d002819_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:23558124:23563875:1 gene:Zm00001d002819 transcript:Zm00001d002819_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13c description:Autophagy-related protein 13a
Sequence	MSGMSDSAGGVRAGAELMVQQFHLKVLHAVLAVRTPRPHAFAAPAAASFRRRDRWFHLPL HDPPPPPEAADRLDELVPGEPLVVDVLLSPAGSVGARGEVVERWTVACEPWPDAAGGEEV AVNRAYKHCFTLLRSVYAVLRVLPAYRIFRLLCANPSYNYEMGHRVDTFAEPFSRPQEAA MRSQRFVPVETQLGRLVVSVQYLPSLAAFNLEITSLSPSKIIPDYVGSPAAEPMRAFPAS LTEATGSGFPPSNQQQRPHSWASPVFWSHTPAHQARFSPPPVFYASPTPSPPHFPPRLMR WESAPMPIPQVSERRSPAHRQNMLPPPSTRRGDMRAAGALQSPSESGRLIGRMEELRIAD PYVTSSPRHKGKDTKDGSGRFSALSSCDSPRQDDLDDVDYHFDVDDVDTPVSQPRRIDGK ETGDQVGSSSHKSQDAQVGSLVNLLRNASPLRNPSNSSQISRAESSEVASASSVTSRRTS DALEELQSFKEIRERLLFRSSAKHQEPPGKP

Transcript Sequence

Transcript ID	Zm00001d002819_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:23558124:23563875:1 gene:Zm00001d002819 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13c description:Autophagy-related protein 13a
Sequence	CTGCAGATAAACACCCCCTCTCCTTCTCTATCTCCTACAGCCAAATCCCCAACTCTTCCA ACCGCTCCTCCGCTTAGCGTGCAGATCTAACGATCGCTCCGATCCCAAGCACAACAACTT CTCCAATTCCAATCACCAGCCGATCAGATTTATGCAGTCTTACTGCCGCGAGCGCCAGTC ATGCCGCGCGGCAGCAGCTTGGACCAGAGCTTGAGCGACGACGAGGGCTCGGCAGGTGTT GGGGCGGTTTGGGTTCGGCGTCGCTGGCAATGTCCGGGATGTCCGACTCCGCTGGGGGTG TGCGCGCGGGCGCGGAGCTGATGGTGCAGCAGTTCCACCTCAAGGTGCTCCACGCCGTCC TCGCCGTGCGCACGCCGCGCCCGCACGCCTTCGCGGCGCCAGCGGCGGCGTCGTTCAGGC GGAGGGACAGGTGGTTCCATCTCCCGCTCCACGACCCGCCGCCGCCGCCCGAGGCGGCTG ACCGCCTGGACGAGCTGGTCCCCGGGGAGCCGCTGGTGGTGGACGTCCTCCTGAGCCCCG CCGGTAGTGTGGGAGCCCGAGGGGAGGTGGTGGAGAGGTGGACTGTGGCGTGCGAGCCCT GGCCGGACGCCGCGGGCGGCGAGGAGGTTGCCGTGAACCGGGCGTACAAGCACTGCTTCA CGCTGCTCAGGTCCGTCTACGCCGTGCTCCGCGTCCTCCCGGCGTACCGCATCTTCCGCC TCCTCTGCGCCAATCCCTCCTACAACTACGAGATGGGCCACCGCGTCGACACCTTCGCCG AGCCCTTCTCGCGCCCCCAGGAGGCCGCCATGCGTTCCCAACGCTTTGTTCCCGTCGAAA CCCAGCTCGGCCGCCTCGTCGTTTCCGTCCAGTACCTTCCCAGCCTCGCCGCCTTCAACC TCGAGATCACCTCCCTTTCGCCCTCCAAGATAATCCCAGACTACGTCGGCAGCCCAGCCG CTGAGCCCATGCGCGCCTTCCCGGCCTCGCTTACAGAAGCCACGGGCTCCGGCTTCCCAC CATCTAATCAGCAGCAGCGCCCGCACAGCTGGGCTTCGCCTGTGTTCTGGTCGCACACGC CGGCACACCAGGCCAGGTTCTCGCCGCCTCCAGTGTTTTACGCGTCACCGACGCCATCGC CTCCCCACTTTCCACCCCGTCTCATGAGGTGGGAGTCTGCACCAATGCCCATACCACAGG TGAGCGAGAGGAGGAGCCCTGCACACCGCCAGAATATGCTACCACCACCTTCGACGAGAA GAGGAGACATGAGGGCAGCAGGTGCTCTACAGTCTCCATCTGAGAGTGGCCGGTTGATTG GGAGGATGGAGGAACTTCGGATAGCTGATCCATATGTGACCTCGTCACCCAGACATAAGG GCAAGGACACTAAAGATGGATCTGGCAGATTCTCTGCACTCTCCTCATGCGATTCACCAC GGCAAGATGATCTGGATGATGTGGATTACCATTTCGACGTTGATGATGTTGATACTCCAG TCTCCCAACCTCGGAGAATTGATGGGAAGGAAACAGGTGATCAGGTTGGTTCATCATCCC ATAAATCTCAAGACGCACAAGTAGGTTCTCTAGTCAACCTGCTGAGAAATGCCAGCCCGC TGCGAAATCCTAGCAATTCATCACAGATATCAAGGGCCGAGTCCAGCGAAGTAGCCTCAG CAAGCTCGGTCACGTCCCGCAGGACATCTGACGCCCTTGAGGAGCTCCAGTCCTTCAAGG AGATAAGGGAGCGACTGCTGTTCCGGAGCAGCGCAAAACATCAAGAGCCACCAGGAAAAC CATAAGGCCATTCTTTGTTTTGTTTCTCTTAACGTGATCGCTGATAGACTCCCAACCGGG AAACCATATGCACAGCGAACTATAGTTGCTGTGTTCATGTATATACGAGTGCTAAAGTTG ATGCTTTTGATTGAAGAGAAGGCACCGGCTTCCATTTATTTCAGCGGAACAATCACTCGT CGTTCTCAAGAGTGATGGAGTGATGCCGCTGTTGATACTCTTTTGTATATGGGAAGCGAA ACCGATACACGTAGGTGGGAGCGAGGGAGCCTGTGAATTGTGATGGATGAAAGCAGGTCT CATTGTGTGCGTGTGTTTGTAAATTATGTAACTGCTGGAAATCAAATGTTCATTAGACGT CAACCTTTGAAGAGTTGCTCGCACTTCGCAAGACTAGTTTTATTTGCTCTTGCTATTTGA TCTGGTAATTTGTGG