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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002799_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:22972434:22973879:-1 gene:Zm00001d002799 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 66 description:Homeobox-leucine zipper protein ATHB-12
Sequence

ATGGACAGGCCAGATCACCAGCAGCAGCAGTTCTTCATGCCGACGACGGTGCAGGTGCCA
CAGCCACAGCAGCAGCAGCAGCAGCTCTGCGTCCCGATGCTCGACGAGCCGCCGTCCTCG
TTTTTGGCGGGGAGAGGCGGAGGCGGGGCGTCGGGGAGGGGGGAGAGGAAGCGGCGGTTC
ACGGAGGAGCAGATACGGTCGCTGGAGTCCATGTTCCACGCGCACCACGCCAAGCTGGAG
CCCCGGGAGAAGGCGGAGCTGGCGCGGGAGCTGGGCCTGCAGCCGCGGCAGGTGGCCATC
TGGTTCCAGAACAAGCGCGCCCGGTGGCGCTCCAAGCAGCTCGAGCACGACTACGCCCTG
CTCCGCGCCAAGTTCGACGATCTCCACGCCCACGTCGAGTCCCTCAAGCAGGACAAGCTC
GCACTCACCACTCAGTTGAGCGAGCTAAGCGAGAGGCTGAGGGAGCGGGACGACCGGGCC
GCCGCCGCCGGCGGCGGCGGCCGCGAGACGATGGCTAGCAGCAGCAGCTGCATCGGCGGT
GGTGGTGAGGAGGAGGCGGAGGACGACAAGAGGAACGTCCTGCTGTTCGGATGCGTCGAC
ATGGAGCCGCCCGCCGAGAGCTGTGTGCTCGTCGGGTCGACGTGCGCGGCGCTGGCCGAC
GTCTCGGTGGAGTCCGAGTGCGACGACCAGCACCTTCACTACGACGACGAGTTCCCGGAG
TCCTACTGCGCCATGCCGGAGCTGTGGGAGCCCTGGCCGCTTGTTGAGTGGAATGCGGTG
GCCTGA

Peptide Sequence

PEP ID

Zm00001d002799_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:22972434:22973879:-1 gene:Zm00001d002799 transcript:Zm00001d002799_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 66 description:Homeobox-leucine zipper protein ATHB-12
Sequence

MDRPDHQQQQFFMPTTVQVPQPQQQQQQLCVPMLDEPPSSFLAGRGGGGASGRGERKRRF
TEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAL
LRAKFDDLHAHVESLKQDKLALTTQLSELSERLRERDDRAAAAGGGGRETMASSSSCIGG
GGEEEAEDDKRNVLLFGCVDMEPPAESCVLVGSTCAALADVSVESECDDQHLHYDDEFPE
SYCAMPELWEPWPLVEWNAVA

Transcript Sequence

Transcript ID

Zm00001d002799_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:22972434:22973879:-1 gene:Zm00001d002799 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 66 description:Homeobox-leucine zipper protein ATHB-12
Sequence

GGAGTCCCGGCCGGCTGGTAGGAAGAACACACACCGCTTCTAGTAGCTATAGCTAGGATC
CAACGATCGATCGATCCATCGACGACATGGACAGGCCAGATCACCAGCAGCAGCAGTTCT
TCATGCCGACGACGGTGCAGGTGCCACAGCCACAGCAGCAGCAGCAGCAGCTCTGCGTCC
CGATGCTCGACGAGCCGCCGTCCTCGTTTTTGGCGGGGAGAGGCGGAGGCGGGGCGTCGG
GGAGGGGGGAGAGGAAGCGGCGGTTCACGGAGGAGCAGATACGGTCGCTGGAGTCCATGT
TCCACGCGCACCACGCCAAGCTGGAGCCCCGGGAGAAGGCGGAGCTGGCGCGGGAGCTGG
GCCTGCAGCCGCGGCAGGTGGCCATCTGGTTCCAGAACAAGCGCGCCCGGTGGCGCTCCA
AGCAGCTCGAGCACGACTACGCCCTGCTCCGCGCCAAGTTCGACGATCTCCACGCCCACG
TCGAGTCCCTCAAGCAGGACAAGCTCGCACTCACCACTCAGTTGAGCGAGCTAAGCGAGA
GGCTGAGGGAGCGGGACGACCGGGCCGCCGCCGCCGGCGGCGGCGGCCGCGAGACGATGG
CTAGCAGCAGCAGCTGCATCGGCGGTGGTGGTGAGGAGGAGGCGGAGGACGACAAGAGGA
ACGTCCTGCTGTTCGGATGCGTCGACATGGAGCCGCCCGCCGAGAGCTGTGTGCTCGTCG
GGTCGACGTGCGCGGCGCTGGCCGACGTCTCGGTGGAGTCCGAGTGCGACGACCAGCACC
TTCACTACGACGACGAGTTCCCGGAGTCCTACTGCGCCATGCCGGAGCTGTGGGAGCCCT
GGCCGCTTGTTGAGTGGAATGCGGTGGCCTGAAATGGAGAGGCTAGTACATAGGCTTAAG
GCTCGTGTGTGTGTAACGTACGTGCATGTCGCCGTCGCCGCGCGCCATGGTGCTCTCGAC
GCAACTGATGGAGAGAACTGGCCGCTTTGTGCCAATGGAGGATGGGGCCAGGCGGTAGGT
CGCGGGATTCGGAGCGCGACGGAAACATGGAACTAGTGATCGAGGCATGGCGACCTTTGG
AGTTTGGAGGCAAATCACCCAATGCCAATACTGCTTTCTTCCACGCTGCAAAAAATCAAC
GGTATTGGTTCAGAGTCGCCCGCGGTGGTAGCGAGTTGCACGGCTTGTTGCAGCCTTTTT
GTTGGTGTGGTGGTGTTTCGAGGTTTCAATAATCTAATGGAAGGATGGTCGCTTCACAAA
TATATATTGTATTGTGCGTGTACATTTGAATGTATATATGCTTGCTTGCAAAAAG