Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002789_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:22698603:22700750:-1 gene:Zm00001d002789 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCTGCTCCATCTCGTCACCTCCTCCCCCCTAACCCCGGCATGCCCCTCGCCTAAGCGG CGTACGTGTGTCGTTGCGGCGGCAGTTCTAGTGACTGTGAGATGTGCGGCCTCCTCCTCG TCGAGCACCCCGTCGTCATCTGCATCGGAGGCTGCTGCTGCCGGGCAGCGGGTGGCGAAG GTGCACAGCTACGGGACGGTGGATTACGAGCGTCGATCTCCACTGCGTTGGGGCACCCTG TACCGGCGCATCGCTGTGGGGCACGGCGGGCGGCCCGTGGGGCGCACGCTGGGGGCGTGG GACGAGGGGGAGCGCCGCCTCGACAAGTGGGAGCTCTGCCGCATCGCCAAGGAGCTCCGG AAGTTCAGGAGGTTCAACCTCGCGCTCCAGGTTTACGATTGGATGACAGAGCGCAGAGAT AGATTTCCTCTCTCATCGAGTGACATGGCAATCCAGTTGGATCTGATTGCCAAAGTACGT GGTGTTCCACATGCTGAGAAATACTTTGACGAGCTCCCTGATGCGATGAAGGACAAGCGG ACGTACGGTTCCCTTCTGAATGTTTACGCCCAAGCTATGATGAAAGAGAAAACAGAAGAA ACATTTGAGCAAATGAGGAAGAAAGGATTTGCGTCTGATACATTACCTTGTAATGTGCTG ATGAATTTCTATGTGGATTCTGGAGAACCTGATGAAGTGCTGGCAATTATTGATGAGATG AAGGAAAGAAATGTTTCTTTTGATGTCTGCACTTACAACATTTGGATAAAAAGTTGTGCG GCTAAACAAGATGCTGAAGAAATGGAGCAAGTCTTTAGCCAAATGATTGCTGATGAGTCT GTCGTTGCCAATTGGACTACTTATACCACTCTGGCTAGCATGTATCTTAAGCTAGGAAAC TCTGAGAAGGCAGAAGAATGCTTGAAAGATGCTGAAAAGAGAACAACAGGCCGGGAGAAA AAGTGTTTTCACTATCTCATGACGCTGTATAGCCATCTTGGGAAGAAGGAAGAAGTTTAC CGAATTTGGAACTGGTATAAGGCAACTTTCCCTATGATTCATAACCTGGGTTACCAGGAG TTACTGTCTGCTCTTATAAGAATAGGAGATATCGAGGGAGCCGAGCTTCTATATGAGGAA TGGGCATCCAAAAGCTATAGTTTTGATCCTAAGACCATGAACATTTTATTAGCATGGTAT GCTAAAGAAGGTCTGATTACAAAGGCTGAGCAAACTGTGAATCGATTTGTTGAGAAAGGT GGAAATCCCAAGCCAAACACCTGGGAAATCCTTGCCACAGCCTACATGAATGATGATAAA ATATCTGAAGCTCTGTCATGCATGGAAAAAGCCACGGCAGTTAAAAGTGCAAGTAAATGG AAACCGAGACCCACCAACGTTGAGACTCTCCTAGCAAGTTTCAAGGAGAAGAATGACGCA GAGGGTGCAGACAGGTTAGTGAGTGTCCTTACAAGTAGAGGATGTGCTGAGGACGAAGAA TACAAGTCACTGATTGACACCTATGCTTTTGCGGGCACATAG

Peptide Sequence

PEP ID	Zm00001d002789_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:22698603:22700750:-1 gene:Zm00001d002789 transcript:Zm00001d002789_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MLLHLVTSSPLTPACPSPKRRTCVVAAAVLVTVRCAASSSSSTPSSSASEAAAAGQRVAK VHSYGTVDYERRSPLRWGTLYRRIAVGHGGRPVGRTLGAWDEGERRLDKWELCRIAKELR KFRRFNLALQVYDWMTERRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDKR TYGSLLNVYAQAMMKEKTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEM KERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGN SEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQE LLSALIRIGDIEGAELLYEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKG GNPKPNTWEILATAYMNDDKISEALSCMEKATAVKSASKWKPRPTNVETLLASFKEKNDA EGADRLVSVLTSRGCAEDEEYKSLIDTYAFAGT

Transcript Sequence

Transcript ID	Zm00001d002789_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:22698603:22700750:-1 gene:Zm00001d002789 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	CTCCCTTCAGGCTTTCATCCGCATTCCGCAGGCCGCAGCGGAAGCCGCCCTCCTCCTCGG CCGCCCCGCACGCTAGCTCACCATGCTGCTCCATCTCGTCACCTCCTCCCCCCTAACCCC GGCATGCCCCTCGCCTAAGCGGCGTACGTGTGTCGTTGCGGCGGCAGTTCTAGTGACTGT GAGATGTGCGGCCTCCTCCTCGTCGAGCACCCCGTCGTCATCTGCATCGGAGGCTGCTGC TGCCGGGCAGCGGGTGGCGAAGGTGCACAGCTACGGGACGGTGGATTACGAGCGTCGATC TCCACTGCGTTGGGGCACCCTGTACCGGCGCATCGCTGTGGGGCACGGCGGGCGGCCCGT GGGGCGCACGCTGGGGGCGTGGGACGAGGGGGAGCGCCGCCTCGACAAGTGGGAGCTCTG CCGCATCGCCAAGGAGCTCCGGAAGTTCAGGAGGTTCAACCTCGCGCTCCAGGTTTACGA TTGGATGACAGAGCGCAGAGATAGATTTCCTCTCTCATCGAGTGACATGGCAATCCAGTT GGATCTGATTGCCAAAGTACGTGGTGTTCCACATGCTGAGAAATACTTTGACGAGCTCCC TGATGCGATGAAGGACAAGCGGACGTACGGTTCCCTTCTGAATGTTTACGCCCAAGCTAT GATGAAAGAGAAAACAGAAGAAACATTTGAGCAAATGAGGAAGAAAGGATTTGCGTCTGA TACATTACCTTGTAATGTGCTGATGAATTTCTATGTGGATTCTGGAGAACCTGATGAAGT GCTGGCAATTATTGATGAGATGAAGGAAAGAAATGTTTCTTTTGATGTCTGCACTTACAA CATTTGGATAAAAAGTTGTGCGGCTAAACAAGATGCTGAAGAAATGGAGCAAGTCTTTAG CCAAATGATTGCTGATGAGTCTGTCGTTGCCAATTGGACTACTTATACCACTCTGGCTAG CATGTATCTTAAGCTAGGAAACTCTGAGAAGGCAGAAGAATGCTTGAAAGATGCTGAAAA GAGAACAACAGGCCGGGAGAAAAAGTGTTTTCACTATCTCATGACGCTGTATAGCCATCT TGGGAAGAAGGAAGAAGTTTACCGAATTTGGAACTGGTATAAGGCAACTTTCCCTATGAT TCATAACCTGGGTTACCAGGAGTTACTGTCTGCTCTTATAAGAATAGGAGATATCGAGGG AGCCGAGCTTCTATATGAGGAATGGGCATCCAAAAGCTATAGTTTTGATCCTAAGACCAT GAACATTTTATTAGCATGGTATGCTAAAGAAGGTCTGATTACAAAGGCTGAGCAAACTGT GAATCGATTTGTTGAGAAAGGTGGAAATCCCAAGCCAAACACCTGGGAAATCCTTGCCAC AGCCTACATGAATGATGATAAAATATCTGAAGCTCTGTCATGCATGGAAAAAGCCACGGC AGTTAAAAGTGCAAGTAAATGGAAACCGAGACCCACCAACGTTGAGACTCTCCTAGCAAG TTTCAAGGAGAAGAATGACGCAGAGGGTGCAGACAGGTTAGTGAGTGTCCTTACAAGTAG AGGATGTGCTGAGGACGAAGAATACAAGTCACTGATTGACACCTATGCTTTTGCGGGCAC ATAGCATGGAGACGGTGCATGATATCATTGAATCAATGATATGATGAGTATGACGCACTG AACAATCACATTACTTGCCCATAATGTTTCTAAAATAGTACCATGAGAACCTATTGCTCT CGTAAGTTCATCTGGTACAGTTACATCCATCAGAGAGGTCAGATAAAATGCATTCGATCA GTTGTCCCC