Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002737_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:20920286:20924673:1 gene:Zm00001d002737 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence

ATGATACTCCCTTCAAATTTGTACTCGAATTATTTTACTCATGTCAGTGCTGCCTCCAGT
TTAATGCAGTTTCCGCTCCTGTTTTTATTAGCAAGCCTTCTAGAAGTTAAAGAAGCAGCC
AGAACCATGACATCCCGTTTCTGGGGACAGGGGGACAGTGAGTCTGAGGAAGAGGAGGAA
GAAGTTGAGTCAGAACAGGGCAGCGATAATGATGATGATGGAGGTCATGGTGGTGCGGGA
CGCGGTGCCCAAAACCGATATTTGAAGAATCAAGAAGATGACAGCGATGAGTCTGACACA
GGTCACCGTGAGATCCGCTCCCTGAGGGACAAGCACAATGAGGAGATGAGATCTATTGTT
GATCAGATGCGTAATGCAATGAAGATCAATGACTGGGTGAGCTTGCAGGAGAGTTTTGAG
AAGCTTAACAAAAATCTTGAGAAGGTTGTTCGTGTCAATGAATCTACTAAGGTACCAAAA
ATGTATATCAAAGCTCTTGTGTTGCTGGAGGACTTCAAGGCTGAAGCCCCTGCAAACAAG
GAGGCCAAGGAGAAGATGAGCAGCAGCAATTCAAAGGCACTCAATAAGATGAGCCAAAAA
CTCACGAAGAACAACAAGCAATATAAAGAGCAGATCCAGAAGTGCAGGGAGCATCCAGAG
AGTTTTGAAGATGAAGCTGCGGATGATAAAGATATGGATGATGATGATGTTGATGAAAGT
GATGCAGAGATCGAAGATCCTGATAAAATAGCTATGTCAGAATCAGAAGAGGATCACGAT
GAAGAGGATGGCGACAAGGAGGGTTGGGAACAGAAAAGGAGTAAGAAGGATAAGATGATG
GATAAGCAGTTCTTGAAAGATCCAAGTGAAATCACATGGGATATTGTCGATAAGAAACTC
AGAGAGATTATAGCATCAAGGGGAAAGAAAGGTACTGGAAGGATCGAGCGTGTTGAGCAG
TTAACGTTTTTAACCCGTGTGGCCAAAACACCAGCTCAGAAGCTTGAAACCCTCTTCCAT
GTGATTTCTGCGCAGTTTGATGTTAACCCTAGTCTACTTGGGCATATGCCAGTCAATGTG
TGGAAGAAGTGTGTCAATAATATGCTTCTTGTGCTTGACATACTCCAGCAGTATCCTAAC
ATTGTAGTAGACACCTCATTTGAGCCTGATGAGAAAGAAACTCAAAAGGGTGCAGACTAC
AATGGAACAATACATATTGTCGGTGACCTGGTTGCATTCCTTGAGAGACTGGACTCTGAA
TTTTTGAAGACCTTACAGTGCACAGATCCGTACACAAAAGATTATGTTCAGAGGCTTAGA
GAGGAACCCCTGTTTCTGGTTGTCGCACAGAATGTCCAAGATTATCTTGAAAGGGTTGGA
AACCTCAAAGCTGCTGCCAAGGTTGCACTGCGTCGTGTTGAACTGGTTTACTATAAACCC
CAAGAAGTGTATGATGCAATGAGAAAACTTGCAGAGCAGCCTGAAGACTGTGTGGATGAT
GATGATGCAGAGGCTGGTGATGAACATCAAGCAGTAGATGACAATAGAGGACCATCACCA
TTTGTTGCAATTCCAGAGGTTGTGCACCGGAAGCCTACTTTTCCAGAGAGTGGTAGAACT
TTGATGGATGGATTGATGTCCTTAATTTACAAGTATGGAGATGAAAGGACCAAAGCCCGT
GCAATGCTGTGTGACATATATCACCATGCGATCTCTGATGAGTTTTCAGTGGCTCGTGAC
TTGCTTTTAATGAGTCATTTGCAAGATGGTGTTCAGCTCATGGACATATCATCACAGATT
TTATTCAATAGAGTCATGGCCCAGTTAGGGCTGTGTGCTTTCAGGGCTGGTTTGATAAAT
GAAGCCCATGGTTGCTTGACTGAGCTCTACTTTACAGGGAGGGTGAAAGAATTGCTTGCA
CAAGGTGTGCAACAAAGCAGATACCATGAAAAAACTCCTGAACAGGAAAGACTTGAGAGG
AGGAGGCAAATGCCTTACCATATGCATATAAACCTGGAGCTTTTGGAAGCCACACACTTG
ATCTGTGCGATGCTGATTGAAGTCCCCAATATGGCTGCCAGCACCTATGACAAGCGGAGG
CCTATGAGCAAAACATTCCGAAGGCTTCTCGAAGTGAGTGAAAGGCAGACATTTGTTGGG
CCGCCTGAGAATGTGAGGGACCATGTAATGGCTGCCACAAGAGCCCTCAAAAAGGGTGAT
CACCAAAAGGCTTTCAGTGTCATAAATTCGCTGGAGATTTGGAAGCTTTTGAGGAACAGA
GAGCATGTTCTTGAGATGTTGAAGCTTAAGATCAAGGAGGAAGCTCTTAGAACCTATCTT
TCATCATACTCGTCTTCCTACAAGTCGTTGAGCCTTAACCAGCTCACCACCATGTTTGAT
CTCAGCGAGCAGCATGCCCACAGTATTGTTAGCAAAATGATGATGCATGAAGAGCTTCAG
GCTAGCTGGCACCAGCCAACAAAGTGCACCGTGTTTCACAGCCTGGATCAAACCAGGCTT
CAGGAGCTACTCTTCCAGGTTGCAGAAAAAATATCGGTCCTGGTGGAGACAAACGAGAGG
GCATACGAGTTAAGAACTGGTGGTACTCTTGAGGGGCTACCGCCCAGGCGCAGGGGCGAG
GCTCAGGATTCATCCAAGTGGCAGGAGAGCTTTGTCGCATCACAGGGGCGGCAGGGTGGT
GGCAACCGGTTTGGATACTCCGGTAGAGGTGCAGCATCTGGTCAAAGTGGTGGACTCCAG
AGGGGCAGGGGCAATCATGTTTCCCGCGGGGGATACGGTGGCAATACACGATTTCAGGAT
GCAAGTGCACACATGGTGAACCTGAACAGGGTTGGTAGGGTTGTTAGTGTTTAG

Peptide Sequence

PEP ID

Zm00001d002737_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:20920286:20924673:1 gene:Zm00001d002737 transcript:Zm00001d002737_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence

MILPSNLYSNYFTHVSAASSLMQFPLLFLLASLLEVKEAARTMTSRFWGQGDSESEEEEE
EVESEQGSDNDDDGGHGGAGRGAQNRYLKNQEDDSDESDTGHREIRSLRDKHNEEMRSIV
DQMRNAMKINDWVSLQESFEKLNKNLEKVVRVNESTKVPKMYIKALVLLEDFKAEAPANK
EAKEKMSSSNSKALNKMSQKLTKNNKQYKEQIQKCREHPESFEDEAADDKDMDDDDVDES
DAEIEDPDKIAMSESEEDHDEEDGDKEGWEQKRSKKDKMMDKQFLKDPSEITWDIVDKKL
REIIASRGKKGTGRIERVEQLTFLTRVAKTPAQKLETLFHVISAQFDVNPSLLGHMPVNV
WKKCVNNMLLVLDILQQYPNIVVDTSFEPDEKETQKGADYNGTIHIVGDLVAFLERLDSE
FLKTLQCTDPYTKDYVQRLREEPLFLVVAQNVQDYLERVGNLKAAAKVALRRVELVYYKP
QEVYDAMRKLAEQPEDCVDDDDAEAGDEHQAVDDNRGPSPFVAIPEVVHRKPTFPESGRT
LMDGLMSLIYKYGDERTKARAMLCDIYHHAISDEFSVARDLLLMSHLQDGVQLMDISSQI
LFNRVMAQLGLCAFRAGLINEAHGCLTELYFTGRVKELLAQGVQQSRYHEKTPEQERLER
RRQMPYHMHINLELLEATHLICAMLIEVPNMAASTYDKRRPMSKTFRRLLEVSERQTFVG
PPENVRDHVMAATRALKKGDHQKAFSVINSLEIWKLLRNREHVLEMLKLKIKEEALRTYL
SSYSSSYKSLSLNQLTTMFDLSEQHAHSIVSKMMMHEELQASWHQPTKCTVFHSLDQTRL
QELLFQVAEKISVLVETNERAYELRTGGTLEGLPPRRRGEAQDSSKWQESFVASQGRQGG
GNRFGYSGRGAASGQSGGLQRGRGNHVSRGGYGGNTRFQDASAHMVNLNRVGRVVSV

Transcript Sequence

Transcript ID

Zm00001d002737_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:20920286:20924673:1 gene:Zm00001d002737 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence

AATGCATATCTAGTACCATTGTCACGTTCTTTTGTACTGATGACAAGTTTGGTTTAACTG
ATGCTATCTGGAAGAGCTCGAACTGTATATCCTAGTTCCTATTATGAATCACCAACATTA
TATCATTTTTTGTCATTTGCGAACAATCCAATTTGAGGTGAACCCTGCATTTGGATCTGA
TCTAATTACAAGCGTATACATGTATTATACTAACTTCGACTGTTTTGCAAAAAAAATATT
GGGTGTGCATGTGTACCCCCATGTCGTCCGCCCCTGATATGCTGTACTTCATCTTCTGTT
TCATAGTCATTTGTTTTGTAGAGTAATTTTTGAGGATTGATTCACTATGATACTCCCTTC
AAATTTGTACTCGAATTATTTTACTCATGTCAGTGCTGCCTCCAGTTTAATGCAGTTTCC
GCTCCTGTTTTTATTAGCAAGCCTTCTAGAAGTTAAAGAAGCAGCCAGAACCATGACATC
CCGTTTCTGGGGACAGGGGGACAGTGAGTCTGAGGAAGAGGAGGAAGAAGTTGAGTCAGA
ACAGGGCAGCGATAATGATGATGATGGAGGTCATGGTGGTGCGGGACGCGGTGCCCAAAA
CCGATATTTGAAGAATCAAGAAGATGACAGCGATGAGTCTGACACAGGTCACCGTGAGAT
CCGCTCCCTGAGGGACAAGCACAATGAGGAGATGAGATCTATTGTTGATCAGATGCGTAA
TGCAATGAAGATCAATGACTGGGTGAGCTTGCAGGAGAGTTTTGAGAAGCTTAACAAAAA
TCTTGAGAAGGTTGTTCGTGTCAATGAATCTACTAAGGTACCAAAAATGTATATCAAAGC
TCTTGTGTTGCTGGAGGACTTCAAGGCTGAAGCCCCTGCAAACAAGGAGGCCAAGGAGAA
GATGAGCAGCAGCAATTCAAAGGCACTCAATAAGATGAGCCAAAAACTCACGAAGAACAA
CAAGCAATATAAAGAGCAGATCCAGAAGTGCAGGGAGCATCCAGAGAGTTTTGAAGATGA
AGCTGCGGATGATAAAGATATGGATGATGATGATGTTGATGAAAGTGATGCAGAGATCGA
AGATCCTGATAAAATAGCTATGTCAGAATCAGAAGAGGATCACGATGAAGAGGATGGCGA
CAAGGAGGGTTGGGAACAGAAAAGGAGTAAGAAGGATAAGATGATGGATAAGCAGTTCTT
GAAAGATCCAAGTGAAATCACATGGGATATTGTCGATAAGAAACTCAGAGAGATTATAGC
ATCAAGGGGAAAGAAAGGTACTGGAAGGATCGAGCGTGTTGAGCAGTTAACGTTTTTAAC
CCGTGTGGCCAAAACACCAGCTCAGAAGCTTGAAACCCTCTTCCATGTGATTTCTGCGCA
GTTTGATGTTAACCCTAGTCTACTTGGGCATATGCCAGTCAATGTGTGGAAGAAGTGTGT
CAATAATATGCTTCTTGTGCTTGACATACTCCAGCAGTATCCTAACATTGTAGTAGACAC
CTCATTTGAGCCTGATGAGAAAGAAACTCAAAAGGGTGCAGACTACAATGGAACAATACA
TATTGTCGGTGACCTGGTTGCATTCCTTGAGAGACTGGACTCTGAATTTTTGAAGACCTT
ACAGTGCACAGATCCGTACACAAAAGATTATGTTCAGAGGCTTAGAGAGGAACCCCTGTT
TCTGGTTGTCGCACAGAATGTCCAAGATTATCTTGAAAGGGTTGGAAACCTCAAAGCTGC
TGCCAAGGTTGCACTGCGTCGTGTTGAACTGGTTTACTATAAACCCCAAGAAGTGTATGA
TGCAATGAGAAAACTTGCAGAGCAGCCTGAAGACTGTGTGGATGATGATGATGCAGAGGC
TGGTGATGAACATCAAGCAGTAGATGACAATAGAGGACCATCACCATTTGTTGCAATTCC
AGAGGTTGTGCACCGGAAGCCTACTTTTCCAGAGAGTGGTAGAACTTTGATGGATGGATT
GATGTCCTTAATTTACAAGTATGGAGATGAAAGGACCAAAGCCCGTGCAATGCTGTGTGA
CATATATCACCATGCGATCTCTGATGAGTTTTCAGTGGCTCGTGACTTGCTTTTAATGAG
TCATTTGCAAGATGGTGTTCAGCTCATGGACATATCATCACAGATTTTATTCAATAGAGT
CATGGCCCAGTTAGGGCTGTGTGCTTTCAGGGCTGGTTTGATAAATGAAGCCCATGGTTG
CTTGACTGAGCTCTACTTTACAGGGAGGGTGAAAGAATTGCTTGCACAAGGTGTGCAACA
AAGCAGATACCATGAAAAAACTCCTGAACAGGAAAGACTTGAGAGGAGGAGGCAAATGCC
TTACCATATGCATATAAACCTGGAGCTTTTGGAAGCCACACACTTGATCTGTGCGATGCT
GATTGAAGTCCCCAATATGGCTGCCAGCACCTATGACAAGCGGAGGCCTATGAGCAAAAC
ATTCCGAAGGCTTCTCGAAGTGAGTGAAAGGCAGACATTTGTTGGGCCGCCTGAGAATGT
GAGGGACCATGTAATGGCTGCCACAAGAGCCCTCAAAAAGGGTGATCACCAAAAGGCTTT
CAGTGTCATAAATTCGCTGGAGATTTGGAAGCTTTTGAGGAACAGAGAGCATGTTCTTGA
GATGTTGAAGCTTAAGATCAAGGAGGAAGCTCTTAGAACCTATCTTTCATCATACTCGTC
TTCCTACAAGTCGTTGAGCCTTAACCAGCTCACCACCATGTTTGATCTCAGCGAGCAGCA
TGCCCACAGTATTGTTAGCAAAATGATGATGCATGAAGAGCTTCAGGCTAGCTGGCACCA
GCCAACAAAGTGCACCGTGTTTCACAGCCTGGATCAAACCAGGCTTCAGGAGCTACTCTT
CCAGGTTGCAGAAAAAATATCGGTCCTGGTGGAGACAAACGAGAGGGCATACGAGTTAAG
AACTGGTGGTACTCTTGAGGGGCTACCGCCCAGGCGCAGGGGCGAGGCTCAGGATTCATC
CAAGTGGCAGGAGAGCTTTGTCGCATCACAGGGGCGGCAGGGTGGTGGCAACCGGTTTGG
ATACTCCGGTAGAGGTGCAGCATCTGGTCAAAGTGGTGGACTCCAGAGGGGCAGGGGCAA
TCATGTTTCCCGCGGGGGATACGGTGGCAATACACGATTTCAGGATGCAAGTGCACACAT
GGTGAACCTGAACAGGGTTGGTAGGGTTGTTAGTGTTTAGAAGTGCGTAAATTTTTGAAG
CACCTGCCCTTTCCATAATTACAAACTTCCTGTTCTAAGCTCAGTCATCCAACTATTTTC
TCTATTTCGTTGTAAGAGTTTGGTACTGTCGGGGTTTGATTAGTGATAGATCCGGCTATC
AAAATTTTGGTCTTTTTTCTTCGACTATGAACAAATAATATATAGAATTTTCTATGTAAA
TTTATATTCTTGTTTTTAGCATTGAGGATATTAATCTTCATAAAAATAAATTTTAAATCC
GTTCTATATCTTTT