Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002736_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:20731283:20734451:1 gene:Zm00001d002736 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:carotenoid cleavage dioxygenase7 description: carotenoid cleavage dioxygenase7
Sequence	ATGTATCAACACACCATGGCCGCCATGCACGCCATCGTGCACCACCGCGCACCGCCGCCT GGCCGCTGCTGTCGCGGCCACGGGCGCAGCGTCGTCGTCCGCGCGTCGGCCGCCACCGTC ACCACCAGCATCCCCGGGTCCGCGGCGACAGTGCCGGACTCGCCGTCCGCGGCGTTCTGG GACTACAACCTCCTATTCCGGTCGCAGCGCGCCGAGTCCCCCGACCCCGTGGTGCTCCGC GTCACGGAGGGCGCGATCCCGCCGGACTTCCCGGCGGGCACCTACTACCTCGCCGGTCCC GGGATGTTCACCGACGACCACGGGTCCACGGTCCACCCGCTCGACGGCCACGGCTACCTC CGCTCGTTCCGCTTCGACGCCAGCGGCGCGGCGCACTACTCCGCGCGGTACGTGGAGACG GCGGCGAAGCGGGAGGAGCACGACGCGGGCGGCGCGTCGTGGCGGTTCACGCACCGGGGC CCCTTCTCGGTGCTGCAGGGTGGGAGCCGGGTGGGCAACGTGAAGGTGATGAAGAACGTG GCCAACACCAGCGTGCTGCGCTGGGGCGGCCGCGTGCTCTGCCTCTGGGAAGGCGGGGAG CCGTACGAGCTGGACCCGCGGACGCTGGAGACCATCGGCCCGTTCGACATCCTCGGCAGC CTCTGCGGCGGTACCGACGAAGTGGCACGAGACGCCAGCGGCGAGGCTGCGCATCACGGG CGCCGGCAGCCGTGGCTGCAGGAGGCAGGGATCGACGTGGCCGCGCGCCTGCTGCGACCG GTCCTCAGTGGTGTCTACAGCATGCCGGCCAAGCGGCTCCTCGCGCACTACAAGATCGAC CCCAAGAAGAACCGGCTGCTGATGGTGGCCTGCAACGCCGAGGACATGCTCCTCCCGCGC TCCAACTTCACTTTCTACGAGTTCGACGCCAACTTCGCGCTGGTGCAGAAGCGGGAGTTC GTCTTGCCGGACCACCTGATGATCCACGACTGGGCCTTCACGGATAGCCAATACGTCCTC CTCGGAAACAGAATCAGGCTGGACATTCCCGGTTCGCTGCTGGCGCTCACGGGCACTCAC CCAATGATCGCGGCCCTCGCCGTGGACCCGAGCCGGCAGTCCACACCCGTCTACCTGCTG CCGCGCACCCCGGAGGCCGAGGCCGAGGCCAGCGGCCGCGACTGGAGCGTGCCCATCGAG GCGCCGTCGCAGATGTGGTCGATGCACGTCGGCAACGCCTTCGAGGAGCGCAACGCCCGG GGCGGCATCAACATACAGCTCCACATGTCCGGCTGCTCCTACCAGTGGTTCAACTTCCAC AGGATGTTTGGTTACAACTGGCTGAACAAGAAGCTGGACCCGTCCTTCATGAATATAGCC AAGGGAAGGGAATGGCTACCTCGTCTTGTTCAGGTGTCCATCGACCTCGACAAGAGAGGG ACGCGCCGAGGATGCGCCGTCCGGAGACTGTCCGACCAGTGGACCAGGCCGGCGGACTTC CCGGCGATCAACCCAGGCTTCGCCAACCGGAGGAGCCGCTTCGTCTACGCCGGTGCCGCC TCCGGCTCGCGCAGATTCTTGCCGTACTTCCCCTTTGACAGCGTTGTCAAGGTAGACGTC TCCGATGGATCAGCGCGGCTGTGGTCTGTCGCTGGGCGCAAGTTCGTCGGTGAGCCGGTC TTCGTCCCCACCGGCAGTGGCGAGGATGACGGCTATGTTCTACTTGTAGAGTATGCAGTG TACGATCACAGGTGCCATCTGGTGCTGCTGGACGCAAGGAAGATCGGGGAAAGGAACGCA GTTGTGGCAAAACTTGAGGTGCCCAAGCACCTCACCTTCCCGATGGGATTCCATGGGTTC TGGGCAGATGAATGA

Peptide Sequence

PEP ID	Zm00001d002736_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:20731283:20734451:1 gene:Zm00001d002736 transcript:Zm00001d002736_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:carotenoid cleavage dioxygenase7 description: carotenoid cleavage dioxygenase7
Sequence	MYQHTMAAMHAIVHHRAPPPGRCCRGHGRSVVVRASAATVTTSIPGSAATVPDSPSAAFW DYNLLFRSQRAESPDPVVLRVTEGAIPPDFPAGTYYLAGPGMFTDDHGSTVHPLDGHGYL RSFRFDASGAAHYSARYVETAAKREEHDAGGASWRFTHRGPFSVLQGGSRVGNVKVMKNV ANTSVLRWGGRVLCLWEGGEPYELDPRTLETIGPFDILGSLCGGTDEVARDASGEAAHHG RRQPWLQEAGIDVAARLLRPVLSGVYSMPAKRLLAHYKIDPKKNRLLMVACNAEDMLLPR SNFTFYEFDANFALVQKREFVLPDHLMIHDWAFTDSQYVLLGNRIRLDIPGSLLALTGTH PMIAALAVDPSRQSTPVYLLPRTPEAEAEASGRDWSVPIEAPSQMWSMHVGNAFEERNAR GGINIQLHMSGCSYQWFNFHRMFGYNWLNKKLDPSFMNIAKGREWLPRLVQVSIDLDKRG TRRGCAVRRLSDQWTRPADFPAINPGFANRRSRFVYAGAASGSRRFLPYFPFDSVVKVDV SDGSARLWSVAGRKFVGEPVFVPTGSGEDDGYVLLVEYAVYDHRCHLVLLDARKIGERNA VVAKLEVPKHLTFPMGFHGFWADE

Transcript Sequence

Transcript ID	Zm00001d002736_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:20731283:20734451:1 gene:Zm00001d002736 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:carotenoid cleavage dioxygenase7 description: carotenoid cleavage dioxygenase7
Sequence	TCGCGACCGAGACCGGCACAACACAAACAGAAACATGTATCAACACACCATGGCCGCCAT GCACGCCATCGTGCACCACCGCGCACCGCCGCCTGGCCGCTGCTGTCGCGGCCACGGGCG CAGCGTCGTCGTCCGCGCGTCGGCCGCCACCGTCACCACCAGCATCCCCGGGTCCGCGGC GACAGTGCCGGACTCGCCGTCCGCGGCGTTCTGGGACTACAACCTCCTATTCCGGTCGCA GCGCGCCGAGTCCCCCGACCCCGTGGTGCTCCGCGTCACGGAGGGCGCGATCCCGCCGGA CTTCCCGGCGGGCACCTACTACCTCGCCGGTCCCGGGATGTTCACCGACGACCACGGGTC CACGGTCCACCCGCTCGACGGCCACGGCTACCTCCGCTCGTTCCGCTTCGACGCCAGCGG CGCGGCGCACTACTCCGCGCGGTACGTGGAGACGGCGGCGAAGCGGGAGGAGCACGACGC GGGCGGCGCGTCGTGGCGGTTCACGCACCGGGGCCCCTTCTCGGTGCTGCAGGGTGGGAG CCGGGTGGGCAACGTGAAGGTGATGAAGAACGTGGCCAACACCAGCGTGCTGCGCTGGGG CGGCCGCGTGCTCTGCCTCTGGGAAGGCGGGGAGCCGTACGAGCTGGACCCGCGGACGCT GGAGACCATCGGCCCGTTCGACATCCTCGGCAGCCTCTGCGGCGGTACCGACGAAGTGGC ACGAGACGCCAGCGGCGAGGCTGCGCATCACGGGCGCCGGCAGCCGTGGCTGCAGGAGGC AGGGATCGACGTGGCCGCGCGCCTGCTGCGACCGGTCCTCAGTGGTGTCTACAGCATGCC GGCCAAGCGGCTCCTCGCGCACTACAAGATCGACCCCAAGAAGAACCGGCTGCTGATGGT GGCCTGCAACGCCGAGGACATGCTCCTCCCGCGCTCCAACTTCACTTTCTACGAGTTCGA CGCCAACTTCGCGCTGGTGCAGAAGCGGGAGTTCGTCTTGCCGGACCACCTGATGATCCA CGACTGGGCCTTCACGGATAGCCAATACGTCCTCCTCGGAAACAGAATCAGGCTGGACAT TCCCGGTTCGCTGCTGGCGCTCACGGGCACTCACCCAATGATCGCGGCCCTCGCCGTGGA CCCGAGCCGGCAGTCCACACCCGTCTACCTGCTGCCGCGCACCCCGGAGGCCGAGGCCGA GGCCAGCGGCCGCGACTGGAGCGTGCCCATCGAGGCGCCGTCGCAGATGTGGTCGATGCA CGTCGGCAACGCCTTCGAGGAGCGCAACGCCCGGGGCGGCATCAACATACAGCTCCACAT GTCCGGCTGCTCCTACCAGTGGTTCAACTTCCACAGGATGTTTGGTTACAACTGGCTGAA CAAGAAGCTGGACCCGTCCTTCATGAATATAGCCAAGGGAAGGGAATGGCTACCTCGTCT TGTTCAGGTGTCCATCGACCTCGACAAGAGAGGGACGCGCCGAGGATGCGCCGTCCGGAG ACTGTCCGACCAGTGGACCAGGCCGGCGGACTTCCCGGCGATCAACCCAGGCTTCGCCAA CCGGAGGAGCCGCTTCGTCTACGCCGGTGCCGCCTCCGGCTCGCGCAGATTCTTGCCGTA CTTCCCCTTTGACAGCGTTGTCAAGGTAGACGTCTCCGATGGATCAGCGCGGCTGTGGTC TGTCGCTGGGCGCAAGTTCGTCGGTGAGCCGGTCTTCGTCCCCACCGGCAGTGGCGAGGA TGACGGCTATGTTCTACTTGTAGAGTATGCAGTGTACGATCACAGGTGCCATCTGGTGCT GCTGGACGCAAGGAAGATCGGGGAAAGGAACGCAGTTGTGGCAAAACTTGAGGTGCCCAA GCACCTCACCTTCCCGATGGGATTCCATGGGTTCTGGGCAGATGAATGACGCCACAGACA TCCATTCTCACTCACTGAGCCCTGAAGTCCAAGACCCATGTTGTCTTGATCGCTTGAAAC CTCTGAAACTGAAAGGAACGCAACAATCGGGTCTTTTCTTCGGGATCGTATCCTGTGCTC ATTGCGCTCCCGCACATGTGAGCACTTTTAATCTGAGGCATCCGTCGTGGTTCTGCTCGT CGGTCCCATTCCCTGCCTGTGTCACCGGCCTCCTGCACGCCGTCGTCGTCCTCCTGCGTC CTGCACGCCGTTGCTATCCTCCTGTGTCCTGCACGCTGCCACCATCCTCCTATGTCCTCC CCGATGCCGTCATGAGAAAGGAACTCATGTATGTAAGCTTGCTTCCACGGATTGCTTCGA CAGGTTGCTAGGTATGTCACAACTGCGATTGTAAACTGATTGTATAGACCCATGTGAATT AAATAGATTGTTTCATGACTGGAAACATCTTGTATCACAGCAATAGATTGGTCCAGAATA TACAAACTGAAAACAAAATAC