Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002708_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:19911563:19919891:-1 gene:Zm00001d002708 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable copper-transporting ATPase HMA5
Sequence

ATGGCGGCGAGCACTCGAGCCCTCTTTCTCTCCTGTTTCCACGGCGGCGGCGGCGCCGAG
GTGAGCCGCCACCTCGCGCTGCGGCCGCGGTACCCGTCCAATCCGCGGCGCCCTAGGTCG
GCCGTGGTAGCCGGCGAAGGAGGTGAAGGCGGAGGAAGCGGTGGTGATCTGGAGGCCGCG
AAAGGGACGGCGGATAGGGACGAGGAGGAGAAAGTGTCGGTGTTCGCGGTGACGGGAATG
ACGTGTGCCGCCTGCGCGGGGTCGGTGGAGAAGGCCGTGAAGCGGCTCCCGGGCATCCAT
GACGCCGCCGTCGACGTCCTCGGGGGACGCGCGCAGGTCGTCTTCTATCCCGCCTTCGTG
TCGGAGGGAAAAATTAGGGAAGCGATCGAGGATGTTGGTTTTGAAGCTAAGCTGATTAAC
GAGGAGGTCAGAGCAAAAAACATTCTAGTATGCAGGTTTCATATAAAAGGGATGACCTGC
ACGTCCTGCACAAACACAGTAGAATCTGCCTTGCAAGCTTTTCCTGGTGTTCAAAGAGCT
TCAGTTGCGTTGGCTACTGAAGAGGCAGAGATCCATTATGATCGCAGGATTGTTACTGCC
AGCCAACTCATCCATGCAGTGGAAGAAACTGGCTTTGAAGCAATACTAATTACTACAGGA
GAAGATCGGAGCAGGATAGACCTCAAACTAGATGGCGTTTTGAGCGAGAGGCTAACAATG
ATACTGAAAAGCTCTATCCAAGCTCTTCCTGGCGTGGAAGACATAAAGATCGATACTGAA
CTCCACAAGGTCACCGTCTCGTACAAGCCTGACCAGACAGGTCCCAGGGACCTCATTGAA
GTCATCGAGTCAGCCACTTCTGGTGGTGTTACTGCATCAATATATGCAGAAGCAGGAGGA
AGGGAGCATCACAGGTATGGAGAAATCAAACGATACAGGCAATCTTTCTTGTGGAGCTTA
ATATTCACTATTCCAGTGTTTCTCACTTCCATGGTGTTCATGTACATCCCTGGGCTGAAG
GATGGGCTCGAAAAAAAGGTTATCAATATGATGAGCATTGGCGAACTATTGCGGTGGATT
TTATCAACACCAGTGCAATTTGTAATTGGTCGAAAGTTTTATACTGGTGCTTACAAGGCA
ATATGCCATGGCTCACCAAATATGGATGTCCTTATTGCTCTAGGGACGAACACGGCTTAC
TTCTACTCAGTTTACTCAGTTCTTCGGGCAGCTACTTCTGAGAATTACATGTCAACTGAT
TTTTTTGAGACTAGCTCCATGCTCATTTCGTTTATCCTTCTTGGAAAGTACCTTGAGATC
TTGGCAAAAGGAAAAACCTCCGAGGCTATTGCCAAGCTGATGGATCTTGCACCGGAAACT
GCAACACTGTTAATGTATGACTATGAAGGAAATGTGGTAGGAGAAAAGGAGATTGACAGC
AGGCTAATTCAGAAAAATGATGTGATCAAAGTAGTCCCAGGTGGAAAAGTTGCTTCTGAT
GGATTTGTTATTTGGGGCCAGAGCCATGTGAATGAAAGCATGATTACTGGAGAATCACGG
CCAGTAGCGAAGAGGAAGGGCGATACTGTAATTGGAGGAACAGTGAATGAGAATGGTGTG
CTGCATGTCCGGGCAACATTTGTCGGATCAGAGACTGCACTGGCACAGATCGTAAGACTA
GTTGAGTCCGCACAAATGGCAAAAGCTCCTGTCCAGAAGTTCGCTGATCAGATATCTAGA
GTCTTTGTCCCACTGGTTATCGTTCTCTCTTTGCTTACTTGGCTTGTGTGGTTCTTAGCT
GGGAGATTCCATGGTTACCCATACTCATGGATACCATCTTCCATGGATAGCTTTCAGCTT
GCTCTTCAGTTTGGAATATCAGTTATGGTGATTGCCTGTCCTTGTGCCTTAGGGCTGGCA
ACTCCAACTGCCGTGATGGTTGCAACTGGAGTTGGTGCGTCACAAGGCGTTCTGATCAAG
GGTGGACAAGCTCTTGAGAGTGCACAAAAGGTAAACTGCATCGTCTTTGATAAGACAGGA
ACGCTGACTGTCGGGAAGCCAGTCGTTGTCAACACCAGGCTTCTCAAAAACATGGTCTTG
CGTGAATTCTTTGATTATGTTGCAGCTGCAGAGGACAACAGTGAGCACCCACTGGCAAAG
GCGATAGTGGAACATGCAAAGAAGTTCTACTCAGAAGAAAACCACATCTGGCCAGAAGCA
AGAGATTTCATTTCGGTCCCCGGACATGGTGTGAGGGCCAAGGTTTGCGATAGGAGTGTC
ATTGTTGGGAACAAGAGCTTCATGCTGTCATCAAGCATTGATATCCCAGTGGAAGCTTCA
GAAATTCTCATGGAAGAAGAGGAAAAGGCGCAAACAGGCATTATTGTGGCTATGGATCAA
GAAGTTGTGGGCATAATTTCTGTATCTGACCCGATAAAACCAAACGCCCGTGAAGTTATA
TCTTACCTCAAGTCCATGAATGTGGAGAGCATTATGGTGACTGGGGACAACTGGGGGACT
GCTAACGCCATTGGCAAAGAGGTTGGAATAGAAAAGATCATCGCCGAAGCAAAACCCGAG
CAGAAGGCTGAAAAGGTGAAGGAACTTCAGCTGTTAGGAAAAACTGTGGCGATGGTTGGT
GACGGAATAAACGACTCCCCGGCACTAGTTTCAGCTAATGTAGGCCTGGCCATTGGCGCT
GGAACAGATGTCGCCATTGAAGCAGCCGACATCGTCCTCATGAAGAGCAACTTGGAGGAT
GTGATCACTGCTATCGATCTCTCCAGGAAAACGTTTTTCCGCATACGGATGAACTACGTG
TGGGCGCTCGGCTACAACGTCATTGGCATACCAATTGCTGCAGGGGTGCTCTTCCCATCG
ACCCGGTTTCGCTTGCCACCATGGGTTGCCGGCGCCGCGATGGCAGCTTCGTCCGTCAGT
GTTGTCTGTTGGTCCCTCCTCTTGAGGTACTACAAGAGTCCAAAGAAGTTTGACAACTGA

Peptide Sequence

PEP ID

Zm00001d002708_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:19911563:19919891:-1 gene:Zm00001d002708 transcript:Zm00001d002708_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable copper-transporting ATPase HMA5
Sequence

MAASTRALFLSCFHGGGGAEVSRHLALRPRYPSNPRRPRSAVVAGEGGEGGGSGGDLEAA
KGTADRDEEEKVSVFAVTGMTCAACAGSVEKAVKRLPGIHDAAVDVLGGRAQVVFYPAFV
SEGKIREAIEDVGFEAKLINEEVRAKNILVCRFHIKGMTCTSCTNTVESALQAFPGVQRA
SVALATEEAEIHYDRRIVTASQLIHAVEETGFEAILITTGEDRSRIDLKLDGVLSERLTM
ILKSSIQALPGVEDIKIDTELHKVTVSYKPDQTGPRDLIEVIESATSGGVTASIYAEAGG
REHHRYGEIKRYRQSFLWSLIFTIPVFLTSMVFMYIPGLKDGLEKKVINMMSIGELLRWI
LSTPVQFVIGRKFYTGAYKAICHGSPNMDVLIALGTNTAYFYSVYSVLRAATSENYMSTD
FFETSSMLISFILLGKYLEILAKGKTSEAIAKLMDLAPETATLLMYDYEGNVVGEKEIDS
RLIQKNDVIKVVPGGKVASDGFVIWGQSHVNESMITGESRPVAKRKGDTVIGGTVNENGV
LHVRATFVGSETALAQIVRLVESAQMAKAPVQKFADQISRVFVPLVIVLSLLTWLVWFLA
GRFHGYPYSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVATGVGASQGVLIK
GGQALESAQKVNCIVFDKTGTLTVGKPVVVNTRLLKNMVLREFFDYVAAAEDNSEHPLAK
AIVEHAKKFYSEENHIWPEARDFISVPGHGVRAKVCDRSVIVGNKSFMLSSSIDIPVEAS
EILMEEEEKAQTGIIVAMDQEVVGIISVSDPIKPNAREVISYLKSMNVESIMVTGDNWGT
ANAIGKEVGIEKIIAEAKPEQKAEKVKELQLLGKTVAMVGDGINDSPALVSANVGLAIGA
GTDVAIEAADIVLMKSNLEDVITAIDLSRKTFFRIRMNYVWALGYNVIGIPIAAGVLFPS
TRFRLPPWVAGAAMAASSVSVVCWSLLLRYYKSPKKFDN

Transcript Sequence

Transcript ID

Zm00001d002708_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:19911563:19919891:-1 gene:Zm00001d002708 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable copper-transporting ATPase HMA5
Sequence

AATCAAAACTCGGTGGAGCCACTGCTACGGCGGCGAAATGGCGGCGAGCACTCGAGCCCT
CTTTCTCTCCTGTTTCCACGGCGGCGGCGGCGCCGAGGTGAGCCGCCACCTCGCGCTGCG
GCCGCGGTACCCGTCCAATCCGCGGCGCCCTAGGTCGGCCGTGGTAGCCGGCGAAGGAGG
TGAAGGCGGAGGAAGCGGTGGTGATCTGGAGGCCGCGAAAGGGACGGCGGATAGGGACGA
GGAGGAGAAAGTGTCGGTGTTCGCGGTGACGGGAATGACGTGTGCCGCCTGCGCGGGGTC
GGTGGAGAAGGCCGTGAAGCGGCTCCCGGGCATCCATGACGCCGCCGTCGACGTCCTCGG
GGGACGCGCGCAGGTCGTCTTCTATCCCGCCTTCGTGTCGGAGGGAAAAATTAGGGAAGC
GATCGAGGATGTTGGTTTTGAAGCTAAGCTGATTAACGAGGAGGTCAGAGCAAAAAACAT
TCTAGTATGCAGGTTTCATATAAAAGGGATGACCTGCACGTCCTGCACAAACACAGTAGA
ATCTGCCTTGCAAGCTTTTCCTGGTGTTCAAAGAGCTTCAGTTGCGTTGGCTACTGAAGA
GGCAGAGATCCATTATGATCGCAGGATTGTTACTGCCAGCCAACTCATCCATGCAGTGGA
AGAAACTGGCTTTGAAGCAATACTAATTACTACAGGAGAAGATCGGAGCAGGATAGACCT
CAAACTAGATGGCGTTTTGAGCGAGAGGCTAACAATGATACTGAAAAGCTCTATCCAAGC
TCTTCCTGGCGTGGAAGACATAAAGATCGATACTGAACTCCACAAGGTCACCGTCTCGTA
CAAGCCTGACCAGACAGGTCCCAGGGACCTCATTGAAGTCATCGAGTCAGCCACTTCTGG
TGGTGTTACTGCATCAATATATGCAGAAGCAGGAGGAAGGGAGCATCACAGGTATGGAGA
AATCAAACGATACAGGCAATCTTTCTTGTGGAGCTTAATATTCACTATTCCAGTGTTTCT
CACTTCCATGGTGTTCATGTACATCCCTGGGCTGAAGGATGGGCTCGAAAAAAAGGTTAT
CAATATGATGAGCATTGGCGAACTATTGCGGTGGATTTTATCAACACCAGTGCAATTTGT
AATTGGTCGAAAGTTTTATACTGGTGCTTACAAGGCAATATGCCATGGCTCACCAAATAT
GGATGTCCTTATTGCTCTAGGGACGAACACGGCTTACTTCTACTCAGTTTACTCAGTTCT
TCGGGCAGCTACTTCTGAGAATTACATGTCAACTGATTTTTTTGAGACTAGCTCCATGCT
CATTTCGTTTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCAAAAGGAAAAACCTCCGA
GGCTATTGCCAAGCTGATGGATCTTGCACCGGAAACTGCAACACTGTTAATGTATGACTA
TGAAGGAAATGTGGTAGGAGAAAAGGAGATTGACAGCAGGCTAATTCAGAAAAATGATGT
GATCAAAGTAGTCCCAGGTGGAAAAGTTGCTTCTGATGGATTTGTTATTTGGGGCCAGAG
CCATGTGAATGAAAGCATGATTACTGGAGAATCACGGCCAGTAGCGAAGAGGAAGGGCGA
TACTGTAATTGGAGGAACAGTGAATGAGAATGGTGTGCTGCATGTCCGGGCAACATTTGT
CGGATCAGAGACTGCACTGGCACAGATCGTAAGACTAGTTGAGTCCGCACAAATGGCAAA
AGCTCCTGTCCAGAAGTTCGCTGATCAGATATCTAGAGTCTTTGTCCCACTGGTTATCGT
TCTCTCTTTGCTTACTTGGCTTGTGTGGTTCTTAGCTGGGAGATTCCATGGTTACCCATA
CTCATGGATACCATCTTCCATGGATAGCTTTCAGCTTGCTCTTCAGTTTGGAATATCAGT
TATGGTGATTGCCTGTCCTTGTGCCTTAGGGCTGGCAACTCCAACTGCCGTGATGGTTGC
AACTGGAGTTGGTGCGTCACAAGGCGTTCTGATCAAGGGTGGACAAGCTCTTGAGAGTGC
ACAAAAGGTAAACTGCATCGTCTTTGATAAGACAGGAACGCTGACTGTCGGGAAGCCAGT
CGTTGTCAACACCAGGCTTCTCAAAAACATGGTCTTGCGTGAATTCTTTGATTATGTTGC
AGCTGCAGAGGACAACAGTGAGCACCCACTGGCAAAGGCGATAGTGGAACATGCAAAGAA
GTTCTACTCAGAAGAAAACCACATCTGGCCAGAAGCAAGAGATTTCATTTCGGTCCCCGG
ACATGGTGTGAGGGCCAAGGTTTGCGATAGGAGTGTCATTGTTGGGAACAAGAGCTTCAT
GCTGTCATCAAGCATTGATATCCCAGTGGAAGCTTCAGAAATTCTCATGGAAGAAGAGGA
AAAGGCGCAAACAGGCATTATTGTGGCTATGGATCAAGAAGTTGTGGGCATAATTTCTGT
ATCTGACCCGATAAAACCAAACGCCCGTGAAGTTATATCTTACCTCAAGTCCATGAATGT
GGAGAGCATTATGGTGACTGGGGACAACTGGGGGACTGCTAACGCCATTGGCAAAGAGGT
TGGAATAGAAAAGATCATCGCCGAAGCAAAACCCGAGCAGAAGGCTGAAAAGGTGAAGGA
ACTTCAGCTGTTAGGAAAAACTGTGGCGATGGTTGGTGACGGAATAAACGACTCCCCGGC
ACTAGTTTCAGCTAATGTAGGCCTGGCCATTGGCGCTGGAACAGATGTCGCCATTGAAGC
AGCCGACATCGTCCTCATGAAGAGCAACTTGGAGGATGTGATCACTGCTATCGATCTCTC
CAGGAAAACGTTTTTCCGCATACGGATGAACTACGTGTGGGCGCTCGGCTACAACGTCAT
TGGCATACCAATTGCTGCAGGGGTGCTCTTCCCATCGACCCGGTTTCGCTTGCCACCATG
GGTTGCCGGCGCCGCGATGGCAGCTTCGTCCGTCAGTGTTGTCTGTTGGTCCCTCCTCTT
GAGGTACTACAAGAGTCCAAAGAAGTTTGACAACTGATGACACCGCCCGGACCGGAGCGA
CCAAAGCAGTGTTATTAAGGTAATAAAAGAAGCTAATATTTTAATGGGTAAAACTATTTG
GTGAGCGACAGGTGAACATTCTGGAGTTGACAAGGAATTGCGTGCGTGAAATAAACTGTA
CATATGCATTGCTTATGTATGATATATATTCACATGGCAAAATCCTGGATTTTATGAACA
TGTTGGCATAGCATAGTTACATTGTAATATATATCTCACCTTTCACTTTTGTAAGAAACT
GAGGCCATGTTTGGTTTCATTTAGTCTTAGGACTAAACTTTAGTCCTAGGAGTAAACTTT
AGTCCCTACTTGTTTGGTTCTAGGGACTAAATAGGTTCTAAAGTCATTAAATACATTGT