Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002703_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:2:19703848:19707781:-1 gene:Zm00001d002703 gene_biotype:protein_coding transcript_biotype:protein_coding description:SPT2 chromatin protein
Sequence	ATGCGGGGCTACGGGTACGAGACCAATGGTAACCACCAGGAAGTGGAAGATGAGTACGGA GATGAGTACTATGATCAAGATGAGTATGATGAGGAAGGTTCGGGTGCTGGGGATGAGTAT TTTGAGGAGGAAGAGCCTACAGAGGGACAAAAGGAGATCCTAGAATTGAGAGAACGATTA AAAGAGCAGATTAGGCGAAAGGCAAAGGCTGCTGCTTCCTGCACAGCTGGCAGATCGTCT TCTTTACAAATACCTCAAGCCAGGGACAAATTTGGCTCTTTCTTTGGGCCATCCAAGCCG GTGATTTCTCGTCGAGTGATTGAAGAAAGAAAATCATTGAAAGAACTGCATAGCACAGTT GCAAGGGAGCCAAGGCCTTCGGGAGTACATAAGGACATTCCGTCGTCCTCTAAAGTGCAA AGTAAAGTAAATGGACATCAGCATAAACAGAAAATTGTTAATCAGGTAAAGAAGAAGGCC GAGGCACTTAAGGATAACCGGGATTATTCATTTCTACTCTCGGATGATGCTGACCTGTCA TCCTCTCCAAAGGAGAAGCCTGCTGCTAGATCTTCCTTGACTCAAAGGGCTGATCGTGAG GTGATGCGAACAACAGTGAAGAGCAAGGCACCAACAAGTCAACCTGCACGGGTGTCAAAT GGATATGGATCTAAGAACAAAATGTCAACTCAAAGGCATGCCGAAGGTAGGGTAGATACC ATGAGAAAGGAGGCTTTCTTGAACAGAGAAAGGGTTGTCTCACGTGACAATGAAAGGATG CATGAAAGGGTTGTTTCACGTGGCAATGAGAGGATGCATGGTAGTGCAATAAATGGGTCC AACCAGGCAAGTACTAGCAAAACCACAATCCAAAAGCTTACAAGCAGAGGTTCCATTGCT AATAAGCAAGCTTCCACGGATCTGAATGATGCTGCTCTGAGGAAGAGCAGTGTAGCCCCA AAGCACCATTTCTCAGAGGTTGACAGATCAAAATCCTTGCAAAGCCAGAAGATGCAGTCA GCTGGTCAGAGACTGCAGCATTCTTCCCATGGTCAGAGGCCACATCAATCCATGCAGCAT AGGCCGCAGCAGTCATTGCAGAGTCGGAGGCCACAGCAAATGACTCAGGATCAGAAGCCA CAACAGTCTTTGCAGAGTCAAAGGACTCAACAGTCCTTGCAGAATAAAAGGCAACAGCAG TCCTCACATATTCAGAAATCGCAGTCCTCACAAGCACACAGACCACAGTCGCTAAGTAAC AGGTCCCAGGAGTTACGAGGACAAAGGCCTCTTTCTTCACAGGGACAATACTTGGAGCAA AGAAGAGTACAGGCAAATGATAGAGTCAAACAAGCTGAAAGGCACATTCGGCCTCCCTCG AAGTCCATGCCATCTCGACCAGTCTCCTCTAATGGAATTCGCGATGATCATGCAAAGAGA AAGCAAGTGGTAAAAAGAAGATTTGATGACGACGACGATGAGGACGACCCCTTGGCAATG ATCAGAAATATGTTCGGATATGCAGGGAGAGATGAGGATGTCAGTGACATGGAAGCAGAT TTTGCTACTATAGAAATGGAAGAGAAAAGAAGTGCGAGGATAGCTAGGCAGGAGGACGAA GAGCAACTTCGCTTGATTGAGGAAGAAGAGAGACGCGAGCAGGAGAGGAAGAGGCGAAAG ATGGCACGAGGCCGATAG

Peptide Sequence

PEP ID	Zm00001d002703_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:2:19703848:19707781:-1 gene:Zm00001d002703 transcript:Zm00001d002703_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:SPT2 chromatin protein
Sequence	MRGYGYETNGNHQEVEDEYGDEYYDQDEYDEEGSGAGDEYFEEEEPTEGQKEILELRERL KEQIRRKAKAAASCTAGRSSSLQIPQARDKFGSFFGPSKPVISRRVIEERKSLKELHSTV AREPRPSGVHKDIPSSSKVQSKVNGHQHKQKIVNQVKKKAEALKDNRDYSFLLSDDADLS SSPKEKPAARSSLTQRADREVMRTTVKSKAPTSQPARVSNGYGSKNKMSTQRHAEGRVDT MRKEAFLNRERVVSRDNERMHERVVSRGNERMHGSAINGSNQASTSKTTIQKLTSRGSIA NKQASTDLNDAALRKSSVAPKHHFSEVDRSKSLQSQKMQSAGQRLQHSSHGQRPHQSMQH RPQQSLQSRRPQQMTQDQKPQQSLQSQRTQQSLQNKRQQQSSHIQKSQSSQAHRPQSLSN RSQELRGQRPLSSQGQYLEQRRVQANDRVKQAERHIRPPSKSMPSRPVSSNGIRDDHAKR KQVVKRRFDDDDDEDDPLAMIRNMFGYAGRDEDVSDMEADFATIEMEEKRSARIARQEDE EQLRLIEEEERREQERKRRKMARGR

Transcript Sequence

Transcript ID	Zm00001d002703_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:19703848:19707781:-1 gene:Zm00001d002703 gene_biotype:protein_coding transcript_biotype:protein_coding description:SPT2 chromatin protein
Sequence	CCCTGGCTCCTGTGCTCCCCATTTCCAGTTTTCCACCCGACGAGAGGCAAAAGCCTCGCG CCCCACGCCGGTCCGGCGGCGACCCCCGCCGTTTCCCGCAGCGACCAAGACGCGGGCTGT GGTCGCCTCCGCCCCGTGCCTACCCGGCCGCGGGCGTAGCAGCCTCCTGGACCGCAGCGC CCTCCCCCCTCCTTTCTCCCGAGCGACTTCTGATCCAGCCGCGTCGCAACAACTGGTCGT TCGAGTCTGATCTCCGCCACCGCGGCGGAACGAGGCGTCTCCGGTCCCCGAGGCGATTCG GTGAATTCGAAGCTCGTACGACGGGATCCTGTTGAGTTTTGACAATGCGGGGCTACGGGT ACGAGACCAATGGTAACCACCAGGAAGTGGAAGATGAGTACGGAGATGAGTACTATGATC AAGATGAGTATGATGAGGAAGGTTCGGGTGCTGGGGATGAGTATTTTGAGGAGGAAGAGC CTACAGAGGGACAAAAGGAGATCCTAGAATTGAGAGAACGATTAAAAGAGCAGATTAGGC GAAAGGCAAAGGCTGCTGCTTCCTGCACAGCTGGCAGATCGTCTTCTTTACAAATACCTC AAGCCAGGGACAAATTTGGCTCTTTCTTTGGGCCATCCAAGCCGGTGATTTCTCGTCGAG TGATTGAAGAAAGAAAATCATTGAAAGAACTGCATAGCACAGTTGCAAGGGAGCCAAGGC CTTCGGGAGTACATAAGGACATTCCGTCGTCCTCTAAAGTGCAAAGTAAAGTAAATGGAC ATCAGCATAAACAGAAAATTGTTAATCAGGTAAAGAAGAAGGCCGAGGCACTTAAGGATA ACCGGGATTATTCATTTCTACTCTCGGATGATGCTGACCTGTCATCCTCTCCAAAGGAGA AGCCTGCTGCTAGATCTTCCTTGACTCAAAGGGCTGATCGTGAGGTGATGCGAACAACAG TGAAGAGCAAGGCACCAACAAGTCAACCTGCACGGGTGTCAAATGGATATGGATCTAAGA ACAAAATGTCAACTCAAAGGCATGCCGAAGGTAGGGTAGATACCATGAGAAAGGAGGCTT TCTTGAACAGAGAAAGGGTTGTCTCACGTGACAATGAAAGGATGCATGAAAGGGTTGTTT CACGTGGCAATGAGAGGATGCATGGTAGTGCAATAAATGGGTCCAACCAGGCAAGTACTA GCAAAACCACAATCCAAAAGCTTACAAGCAGAGGTTCCATTGCTAATAAGCAAGCTTCCA CGGATCTGAATGATGCTGCTCTGAGGAAGAGCAGTGTAGCCCCAAAGCACCATTTCTCAG AGGTTGACAGATCAAAATCCTTGCAAAGCCAGAAGATGCAGTCAGCTGGTCAGAGACTGC AGCATTCTTCCCATGGTCAGAGGCCACATCAATCCATGCAGCATAGGCCGCAGCAGTCAT TGCAGAGTCGGAGGCCACAGCAAATGACTCAGGATCAGAAGCCACAACAGTCTTTGCAGA GTCAAAGGACTCAACAGTCCTTGCAGAATAAAAGGCAACAGCAGTCCTCACATATTCAGA AATCGCAGTCCTCACAAGCACACAGACCACAGTCGCTAAGTAACAGGTCCCAGGAGTTAC GAGGACAAAGGCCTCTTTCTTCACAGGGACAATACTTGGAGCAAAGAAGAGTACAGGCAA ATGATAGAGTCAAACAAGCTGAAAGGCACATTCGGCCTCCCTCGAAGTCCATGCCATCTC GACCAGTCTCCTCTAATGGAATTCGCGATGATCATGCAAAGAGAAAGCAAGTGGTAAAAA GAAGATTTGATGACGACGACGATGAGGACGACCCCTTGGCAATGATCAGAAATATGTTCG GATATGCAGGGAGAGATGAGGATGTCAGTGACATGGAAGCAGATTTTGCTACTATAGAAA TGGAAGAGAAAAGAAGTGCGAGGATAGCTAGGCAGGAGGACGAAGAGCAACTTCGCTTGA TTGAGGAAGAAGAGAGACGCGAGCAGGAGAGGAAGAGGCGAAAGATGGCACGAGGCCGAT AGTCCAACACGCGTCATATTTGGGTGTTATAAT