Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002621_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:16980364:16988252:-1 gene:Zm00001d002621 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL7
Sequence

ATGTTTGGGTCGGGGCTGAACCTAGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCAGCC
TTCGCGGCGTTCGTCTGTGTGAGGTTCATCTGCTGCCGCGAACGCCGTGGTGACACCCGT
GCGCCGCCATCGCCGGATTTCGCCGCGGAACTCGATGGCCCGATAGAACGCACTCGTACT
GGGTTGGAACCTTTGGTTATTGCTGCAATTCCTACTATGAAGTACAATTGTGAGGCTTTC
AACTCTAAAGACGATGTCCAGTGCTCAATATGTTTAGGCGAATACAGGGAGAAAGAGATA
CTACGAATCATACCAACATGCCGCCACAGCTTTCACCTTGCCTGCTTAGATTTATGGTTG
GAAAAGCAGACGACTTGCCCAATATGCCGGGTCTCACTGGAAGAGCTGCAGGCTGCCATG
CCATCGGTATGTAGCATCCAGCAACTCCCGCCCGAGCCCGACCCCGACCCCGACCCAGAG
AATTCTGATAACCCAGCACCTCAGTGTTTCCAACCTGCTCGTCAACATCCCAGAGATCAA
AATAATAGCCAGGAGACGCACGAATCAGTAGAAGTGATTATTGAAATTCGACGATGA

Peptide Sequence

PEP ID

Zm00001d002621_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:16980364:16988252:-1 gene:Zm00001d002621 transcript:Zm00001d002621_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL7
Sequence

MFGSGLNLVSAALGFGMTAAFAAFVCVRFICCRERRGDTRAPPSPDFAAELDGPIERTRT
GLEPLVIAAIPTMKYNCEAFNSKDDVQCSICLGEYREKEILRIIPTCRHSFHLACLDLWL
EKQTTCPICRVSLEELQAAMPSVCSIQQLPPEPDPDPDPENSDNPAPQCFQPARQHPRDQ
NNSQETHESVEVIIEIRR

Transcript Sequence

Transcript ID

Zm00001d002621_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:16980364:16988252:-1 gene:Zm00001d002621 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL7
Sequence

GCCTTGACTCGGAGTAAGTCCTCTCCGTCTCAGCTCGCGAGCCACAGTAGCAGCCGCCCC
TTCAGCCTCCATCATCTGGCGCTCGTCCGCTCCCTTCCTCCGCACCTCGCCACCGGCCGC
TGCCGCACCGGTCGCCCCTTTCTTCGCGGCCCCATCGCATCGCACCCGGTTGGCCTCAAC
CGGCTAGCTCCGCATCGTGCCCCACCAAATGGGCGCCCCGGGCCGCGACCTCACCGCTCT
CCTATCTATCCGCGGCAGCGGCAGCCCGTCTGTTCAAGCGGTAGGCTATCGCCTTTCAGT
GTCTGGTAGGTGGTATCAGTGATTCAGTGTGAGGACGGAGGCGGAGGGGAGGTGGGGCAA
ACTCGGTGTGAAGCACATCAGCGGGCATGTTTGGGTCGGGGCTGAACCTAGTCAGCGCGG
CGCTCGGCTTCGGCATGACCGCAGCCTTCGCGGCGTTCGTCTGTGTGAGGTTCATCTGCT
GCCGCGAACGCCGTGGTGACACCCGTGCGCCGCCATCGCCGGATTTCGCCGCGGAACTCG
ATGGCCCGATAGAACGCACTCGTACTGGGTTGGAACCTTTGGTTATTGCTGCAATTCCTA
CTATGAAGTACAATTGTGAGGCTTTCAACTCTAAAGACGATGTCCAGTGCTCAATATGTT
TAGGCGAATACAGGGAGAAAGAGATACTACGAATCATACCAACATGCCGCCACAGCTTTC
ACCTTGCCTGCTTAGATTTATGGTTGGAAAAGCAGACGACTTGCCCAATATGCCGGGTCT
CACTGGAAGAGCTGCAGGCTGCCATGCCATCGGTATGTAGCATCCAGCAACTCCCGCCCG
AGCCCGACCCCGACCCCGACCCAGAGAATTCTGATAACCCAGCACCTCAGTGTTTCCAAC
CTGCTCGTCAACATCCCAGAGATCAAAATAATAGCCAGGAGACGCACGAATCAGTAGAAG
TGATTATTGAAATTCGACGATGAATAGAAACATTGACATGAATGTAGAAAGCTAAGCGAC
GGAGGCAAATATGGAACATTTCCTGCAACCAAGCACCGGCGTTTTCTTTAGGGCTACTGC
TAATCAATTAGTCATGTCGCCCGCAGCATTGTCTCGGTATCATGACGTTTCATCTCCCAA
TTCCTTTGTAGAGGAAAAAGAAAAGTTTATGTACGATTCACGTAGTAGGTCATCATGTTA
TATTATTGAGAATCTGAGGCCTTTGAGATCATTTTGATGTTGTAAATATACATTGTATCA
ATATTGAATAACATAAAGGGTCAGAGCTG