Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002544_T021
CDS Infomation	cds chromosome:B73_RefGen_v4:2:15093845:15099386:1 gene:Zm00001d002544 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence	ATGTCAAATCCAGAAATACATGATTTGAAGGATGTTATGGTTGGTAACCAAGAAAAGGAG CAGAAAATTACCCAAACACCTAAACTGAAAACCTTTGAAGGACCCCGTGCAGCATGTAGG TTAGATTCTCTGAAGGATGTTTTTTTCTGGGGTGATGCTTTTGGAAGTATTTTAGAGTGT GGTGATACCTCAAAACCCCTTCCAATGTTAGTGGACTCAACGAACATGCTTGATGTACAA AGCATTGCTTGCGGAGAGACTCATGCGGCCATAATCACTAAGCAAGGAGAGGTCTACTCC TGGGGAAATGAGAGCAGTGGCAGAATTGGAAATCAAGTAAATATCAAAGTCTCCCGGCCC AAGGTCGTTCAATCTCTTGCCTCTTTACATGTGAAGGATGTGGCCTATGGATCAAAGCAC ACTTGTGCAGTAACTGTTTCTGGTGAACTTATTGAATGGGGAGAAGGACCCTATATGGGC CAGTTGGACAGCTATGCGAGGAATCAATGGTTTCCGCATAAATTGTTTAGTCCACTGGAC GGCATATCTGTTGTGAAGATTGCTTGTGGTCCTTGGCACACAGCAATAATAACGTCTTCT GGTCAGTTATACACATATGGGGATGGAACATTTGGTGTTCTTGGTCATGGAGATACACAA GGAACTACCCGGCCTAAAGAAGTAGAGTCTTTGAAAGGCTCAAGAGTGAAATGTGTGGCA TGTGGGCCATGGCACACAGCTGCCATTGTGGAAGTGATCAGTGATTTCAAGAGCAATTCA CCAAGAAGCAAGCTGTTCACATGGGGCGATGCAGATCGGGGGAAGCTGGGTCATGCTGAC AAAAAGATGAAGCTTATACCAACATGTGTTGATTCACTCACAGACTATGATTTTATTCAG GTGTCCTGCGGGACGGCACTCACTGTTGCTCTCTCTGTTACTGGTGTGGTCTTTACTAGT GGCAGTTCGATGCATGGGCAATTAGGGAACCCCCATGCAGATGGTAAAACTGTTTCTGCT GTTGAAGGACTACTTAAGAGCGAGTTTGTCAGACATATATCATCAGGTTCTTCCCATGTA GCAGTGGTGACTACAAATGGGAAAGTGTTTACATGGGGTAAAGGCAAGGAAGGGCAGCTT GGTTTAGGTGACTTCCTTAATAGGAGCACTCCAACTTTAGTAGATGCATTGGAAGGTAGG CATGTGGAAAGCCTATCTTGTGGTTACAACTACACTGCAGCAGTATGTCTGCATAAAGTA ATCTCAAGGAAGGACCTCTCTGTATGTAGTGGTTGCAAGATGGCTTTTGGTTTCACTAGA AAGAAGCACAACTGTTACCATTGTGGATCCATGTTCTGTAATTCCTGTAGTAGTAACAAG GTTGCCAAGGCAGCACTTGCACCAGATAAGAGCAGAAGGTATCGTGTGTGTGATGGGTGT TTCAGTCAGCTACTGAAAGTTGTGGATTCTGGTAAGGTAAAGTCTGAACTAAATACCAGC AAAGGAGCTGAAATTATAAGGTCATACACACCAAAGTTGTCTCGTATATTCAGGGATGTA AACTTACCTGTGGAAAAGGAAAAGGTGGCTTTAGTACAACGCTCCAATCAGAGAAATGAG GTCCTGTACACTCCAGTCCAAGCGAAATCTCAGAGATGGGGGCAAGTTGAGTGCCCAGCT CAATTTCTATCTGCAGAAGACAGTTCTCATTATCAATCTATATCGAAGAATCACATGTAT AGTGCCTCTGTTTCCGAGAGAATGCATGACCCCACAGTGCTGAAGTCTGGCAGATCTTTG CAACAGCCTAATGATGACCAGAGGAAAGATCTTAACAGCATAGAAGAAACCTTGCTCACT GAAGAAGTAAAGCAGCTTCGTTCACAGATGACACTTCTCATGGAGCAATACCATCAGAAA GCTCTTCAGGTTGAACTGTATAAACAAAAACTCGATGAGACATGGCTAATTGTTAGGAAT GAGGCTGCAAAATGCAAAGCTGCCAAAGATATCATAAAGGTTCTAACTGATCAGTGTAAG GCCTTGTCAGAGAAACTTTTGGTCGGTCAGCAATATGAGAACCTTGAGACAAAATCTAAT ATCAGCCAAGGACAAACATTTTCAGCAGATTTGCAACATCATCCCAGTGAAAAATTTGCC ACAGGCAAATTCGGACAACTCGACAACACCAAAAATCACCAGACCAGCAGCCAAGGAGAC GAAGAATATACACCTTCTTCAAGTTCTGATGTGCAGGTAGAAGGATTGTGTGGTCATTTG AATGGTTCAAGAACATTTGACAGTAATGGCCGTATTACAGAAGGGAATTCCATTGTTGCT CGCGTCACCTCCAATGGTGTGATCGAGCAAATCGAGCGTGGGGTGTATGTCACATTTGCT GTATCACCTTGTGGCAAGAAAGACATAAAACGTGTACGATTCAGTCGGAAGCATTTTGGC GAGAAGGAAGCTCAACACTGGTGGGAAGAGAATAAGGGCAGCGTCTATGCAAAGTACAGC ACTGAAAAAGCGCAACATCAGCTAGAGGTTACAATCAAGAGTGTACAAGAGTAA

Peptide Sequence

PEP ID	Zm00001d002544_P021
PEP Infomation	pep chromosome:B73_RefGen_v4:2:15093845:15099386:1 gene:Zm00001d002544 transcript:Zm00001d002544_T021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence	MSNPEIHDLKDVMVGNQEKEQKITQTPKLKTFEGPRAACRLDSLKDVFFWGDAFGSILEC GDTSKPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRP KVVQSLASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLD GISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVA CGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQ VSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHV AVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKV ISRKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVAKAALAPDKSRRYRVCDGC FSQLLKVVDSGKVKSELNTSKGAEIIRSYTPKLSRIFRDVNLPVEKEKVALVQRSNQRNE VLYTPVQAKSQRWGQVECPAQFLSAEDSSHYQSISKNHMYSASVSERMHDPTVLKSGRSL QQPNDDQRKDLNSIEETLLTEEVKQLRSQMTLLMEQYHQKALQVELYKQKLDETWLIVRN EAAKCKAAKDIIKVLTDQCKALSEKLLVGQQYENLETKSNISQGQTFSADLQHHPSEKFA TGKFGQLDNTKNHQTSSQGDEEYTPSSSSDVQVEGLCGHLNGSRTFDSNGRITEGNSIVA RVTSNGVIEQIERGVYVTFAVSPCGKKDIKRVRFSRKHFGEKEAQHWWEENKGSVYAKYS TEKAQHQLEVTIKSVQE

Transcript Sequence

Transcript ID	Zm00001d002544_T021
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:15093845:15099386:1 gene:Zm00001d002544 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence	CAGTAGGCAGATCGACAGTTGTACAAATACTCCCAGCAGCTATATTCAGCTTAAGAGTAA GTTACTAAGTGTGCATGGCACACCAAGGCACATACAGGTTAAGGTATGTTCATCGCAAAG GAAGCCCAAGAAGGCACACGGAACATTTTTTGGTGGTAGCGCTGATTGTTCAGAATCATT ATTTTACACAAGGCAGCGAACATTCTCTGACATAGGTACCTACTTGGAAAATCTTACACG CAAGATGTCAAATCCAGAAATACATGATTTGAAGGATGTTATGGTTGGTAACCAAGAAAA GGAGCAGAAAATTACCCAAACACCTAAACTGAAAACCTTTGAAGGACCCCGTGCAGCATG TAGGTTAGATTCTCTGAAGGATGTTTTTTTCTGGGGTGATGCTTTTGGAAGTATTTTAGA GTGTGGTGATACCTCAAAACCCCTTCCAATGTTAGTGGACTCAACGAACATGCTTGATGT ACAAAGCATTGCTTGCGGAGAGACTCATGCGGCCATAATCACTAAGCAAGGAGAGGTCTA CTCCTGGGGAAATGAGAGCAGTGGCAGAATTGGAAATCAAGTAAATATCAAAGTCTCCCG GCCCAAGGTCGTTCAATCTCTTGCCTCTTTACATGTGAAGGATGTGGCCTATGGATCAAA GCACACTTGTGCAGTAACTGTTTCTGGTGAACTTATTGAATGGGGAGAAGGACCCTATAT GGGCCAGTTGGACAGCTATGCGAGGAATCAATGGTTTCCGCATAAATTGTTTAGTCCACT GGACGGCATATCTGTTGTGAAGATTGCTTGTGGTCCTTGGCACACAGCAATAATAACGTC TTCTGGTCAGTTATACACATATGGGGATGGAACATTTGGTGTTCTTGGTCATGGAGATAC ACAAGGAACTACCCGGCCTAAAGAAGTAGAGTCTTTGAAAGGCTCAAGAGTGAAATGTGT GGCATGTGGGCCATGGCACACAGCTGCCATTGTGGAAGTGATCAGTGATTTCAAGAGCAA TTCACCAAGAAGCAAGCTGTTCACATGGGGCGATGCAGATCGGGGGAAGCTGGGTCATGC TGACAAAAAGATGAAGCTTATACCAACATGTGTTGATTCACTCACAGACTATGATTTTAT TCAGGTGTCCTGCGGGACGGCACTCACTGTTGCTCTCTCTGTTACTGGTGTGGTCTTTAC TAGTGGCAGTTCGATGCATGGGCAATTAGGGAACCCCCATGCAGATGGTAAAACTGTTTC TGCTGTTGAAGGACTACTTAAGAGCGAGTTTGTCAGACATATATCATCAGGTTCTTCCCA TGTAGCAGTGGTGACTACAAATGGGAAAGTGTTTACATGGGGTAAAGGCAAGGAAGGGCA GCTTGGTTTAGGTGACTTCCTTAATAGGAGCACTCCAACTTTAGTAGATGCATTGGAAGG TAGGCATGTGGAAAGCCTATCTTGTGGTTACAACTACACTGCAGCAGTATGTCTGCATAA AGTAATCTCAAGGAAGGACCTCTCTGTATGTAGTGGTTGCAAGATGGCTTTTGGTTTCAC TAGAAAGAAGCACAACTGTTACCATTGTGGATCCATGTTCTGTAATTCCTGTAGTAGTAA CAAGGTTGCCAAGGCAGCACTTGCACCAGATAAGAGCAGAAGGTATCGTGTGTGTGATGG GTGTTTCAGTCAGCTACTGAAAGTTGTGGATTCTGGTAAGGTAAAGTCTGAACTAAATAC CAGCAAAGGAGCTGAAATTATAAGGTCATACACACCAAAGTTGTCTCGTATATTCAGGGA TGTAAACTTACCTGTGGAAAAGGAAAAGGTGGCTTTAGTACAACGCTCCAATCAGAGAAA TGAGGTCCTGTACACTCCAGTCCAAGCGAAATCTCAGAGATGGGGGCAAGTTGAGTGCCC AGCTCAATTTCTATCTGCAGAAGACAGTTCTCATTATCAATCTATATCGAAGAATCACAT GTATAGTGCCTCTGTTTCCGAGAGAATGCATGACCCCACAGTGCTGAAGTCTGGCAGATC TTTGCAACAGCCTAATGATGACCAGAGGAAAGATCTTAACAGCATAGAAGAAACCTTGCT CACTGAAGAAGTAAAGCAGCTTCGTTCACAGATGACACTTCTCATGGAGCAATACCATCA GAAAGCTCTTCAGGTTGAACTGTATAAACAAAAACTCGATGAGACATGGCTAATTGTTAG GAATGAGGCTGCAAAATGCAAAGCTGCCAAAGATATCATAAAGGTTCTAACTGATCAGTG TAAGGCCTTGTCAGAGAAACTTTTGGTCGGTCAGCAATATGAGAACCTTGAGACAAAATC TAATATCAGCCAAGGACAAACATTTTCAGCAGATTTGCAACATCATCCCAGTGAAAAATT TGCCACAGGCAAATTCGGACAACTCGACAACACCAAAAATCACCAGACCAGCAGCCAAGG AGACGAAGAATATACACCTTCTTCAAGTTCTGATGTGCAGGTAGAAGGATTGTGTGGTCA TTTGAATGGTTCAAGAACATTTGACAGTAATGGCCGTATTACAGAAGGGAATTCCATTGT TGCTCGCGTCACCTCCAATGGTGTGATCGAGCAAATCGAGCGTGGGGTGTATGTCACATT TGCTGTATCACCTTGTGGCAAGAAAGACATAAAACGTGTACGATTCAGTCGGAAGCATTT TGGCGAGAAGGAAGCTCAACACTGGTGGGAAGAGAATAAGGGCAGCGTCTATGCAAAGTA CAGCACTGAAAAAGCGCAACATCAGCTAGAGGTTACAATCAAGAGTGTACAAGAGTAACC ACAAGTTGGATTGGGTTACCTACTGCTGAGCAAGATGAAAAAATGACATGGAGCAAATAA GATGATATTAACGGAACAGATAACTGACCGTCCTTTTTCAATGAAAATAGGCAGTTTAAC TTATTGTAGATACGAATGTACAGATAAGAATGAGTGAATGACGGCTGGATGCCTCCTTTC TTTTCT