Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002538_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:14986766:14990378:-1 gene:Zm00001d002538 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP binding
Sequence

ATGGTCTTCGATATGAGTGATGAATCCACCTTGCTTACTCTGCAAAGCTGGGCTGCCAGT
GTTGATATCCAGAGGTTTGAGATCTTGTTATGCGTTGGAAATAAAGCAGATCTTGTACCT
GGTCATAGCGTGCATGTAGAATATAGGAGGCGTATGCAAAATCTTGGGGAGTCAAGTTCT
GATCCACACCCTGATTATTTCAATTTTGGGATAAATGAAAGTGAGGGTTGTAGCTTGTTA
TCTGAGGAAGAACCATGCATAAAGATCAGAAACTCGACTGCACAGTGGTGCATTGAGCAG
AACATAGAATATATTGAGGCCTGTGCTTCCAATGCTGACTTTGATAAGTGTCTATCAGTG
GATGGTGATAGCCAAGGCTTAGAGCGACTCCTTGGAGCTCTTTCTGCACATATGTGGCCT
GGAATGATTCTGAAATCTGGAAACAGAATAACTGTCCCATCCTTGGTTGAAAAACAAGAA
TCCACAGATGATGAATCCAACTATGATTTTGAGTACGAGGTCTTGTCTCATGGATCCGAT
GACCAGTGGGAATTTATTGGAGAGACAAGTACATCCAGAAGATTTGAGAGACCAAATGAG
CCTGATGGTGCACAGGATCACACACATCAAGTTGTGAATGCCGGTACTGACTCTTCAGCA
TCCAACTCTCCCCCGACTAACACACCCACAGAAACTGCTGAAGAGAATACTGTAACTCAG
AGCAACAAAACCGACAATAGTGATCATGTGGACAAAACCACAGCATATAGCACTGAGGAT
CATCAAAGTGATCTTCGAGAGGCTAACCATCTTTTTGAGGACGAGCATTATGGTCTGGAT
GACCTGGAGAAAATAATGTCGGAGATTGGCAACATGCGATCAAACTTAAGACTCATGCCT
GACTTCCAAAGGAGGGAGATGGCTGCAAAGCTAGCCATGAAAATGGCAGCCATGTTTGGT
GATGATGATGAAGAGGCATTTGATGATATCTAA

Peptide Sequence

PEP ID

Zm00001d002538_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:14986766:14990378:-1 gene:Zm00001d002538 transcript:Zm00001d002538_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP binding
Sequence

MVFDMSDESTLLTLQSWAASVDIQRFEILLCVGNKADLVPGHSVHVEYRRRMQNLGESSS
DPHPDYFNFGINESEGCSLLSEEEPCIKIRNSTAQWCIEQNIEYIEACASNADFDKCLSV
DGDSQGLERLLGALSAHMWPGMILKSGNRITVPSLVEKQESTDDESNYDFEYEVLSHGSD
DQWEFIGETSTSRRFERPNEPDGAQDHTHQVVNAGTDSSASNSPPTNTPTETAEENTVTQ
SNKTDNSDHVDKTTAYSTEDHQSDLREANHLFEDEHYGLDDLEKIMSEIGNMRSNLRLMP
DFQRREMAAKLAMKMAAMFGDDDEEAFDDI

Transcript Sequence

Transcript ID

Zm00001d002538_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:14986766:14990378:-1 gene:Zm00001d002538 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP binding
Sequence

GGCGCGAGACCATGGAGGGATCCCTGGAGGCGCGGCCCGGTGTCCTACTCGTCGGCGCCC
CGGGCGTCGGCAAGCGGACCATCCTCTCCCGTGTGGACAATTGAAACAAAGTATTATTCA
GCTGATCTTTCCATCTGGACAGCAAATCTTGGTGAAGAATTTTCTCTTGATTCCCTCCCT
CATTTAGACCGGGTGGCTGCCCTCGTTATGGTCTTCGATATGAGTGATGAATCCACCTTG
CTTACTCTGCAAAGCTGGGCTGCCAGTGTTGATATCCAGAGGTTTGAGATCTTGTTATGC
GTTGGAAATAAAGCAGATCTTGTACCTGGTCATAGCGTGCATGTAGAATATAGGAGGCGT
ATGCAAAATCTTGGGGAGTCAAGTTCTGATCCACACCCTGATTATTTCAATTTTGGGATA
AATGAAAGTGAGGGTTGTAGCTTGTTATCTGAGGAAGAACCATGCATAAAGATCAGAAAC
TCGACTGCACAGTGGTGCATTGAGCAGAACATAGAATATATTGAGGCCTGTGCTTCCAAT
GCTGACTTTGATAAGTGTCTATCAGTGGATGGTGATAGCCAAGGCTTAGAGCGACTCCTT
GGAGCTCTTTCTGCACATATGTGGCCTGGAATGATTCTGAAATCTGGAAACAGAATAACT
GTCCCATCCTTGGTTGAAAAACAAGAATCCACAGATGATGAATCCAACTATGATTTTGAG
TACGAGGTCTTGTCTCATGGATCCGATGACCAGTGGGAATTTATTGGAGAGACAAGTACA
TCCAGAAGATTTGAGAGACCAAATGAGCCTGATGGTGCACAGGATCACACACATCAAGTT
GTGAATGCCGGTACTGACTCTTCAGCATCCAACTCTCCCCCGACTAACACACCCACAGAA
ACTGCTGAAGAGAATACTGTAACTCAGAGCAACAAAACCGACAATAGTGATCATGTGGAC
AAAACCACAGCATATAGCACTGAGGATCATCAAAGTGATCTTCGAGAGGCTAACCATCTT
TTTGAGGACGAGCATTATGGTCTGGATGACCTGGAGAAAATAATGTCGGAGATTGGCAAC
ATGCGATCAAACTTAAGACTCATGCCTGACTTCCAAAGGAGGGAGATGGCTGCAAAGCTA
GCCATGAAAATGGCAGCCATGTTTGGTGATGATGATGAAGAGGCATTTGATGATATCTAA
GGCAATTCATGTAACTCCACCTTGCTGATTCCCAGACAGGGTTGCAGATGATTGAAAGAT
GGCTTTGTACAAGCCGACGAGCCTCTTGCCACCTAGGGCCTTTCTCATGATAATGTCTTT
TTTCTTAGTGAAAATTTTTGTGGCTGTTGAGCGTTCTATATGCCTTGTAAGATGTATTAT
TATGAACTTTAACTCCTTCAATCATCCAGGTGGAAATTTTGTGG