Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002510_T018
CDS Infomation	cds chromosome:B73_RefGen_v4:2:14289549:14306723:-1 gene:Zm00001d002510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of nonsense transcripts 1 homolog
Sequence	ATGCCTCCGAAGAAGCGCGCCGCCGCCGCCGCCTCTTCAAAGAAGCCGCAGCCATCGCAG CCATCGCAGCCCGCCAAGTTCGGTATCCTCCACTTCTTCGAGCGCCAGACCCAGGCCTCC CAGAACGCCAAGCGCCAGAAGCCCGACCCCCCTGCGCCTCCCCCTCCTCCTCCGCCGCCG CCCGAGAAGGAGCCCTCGGAGGTCTCGCCGGAGGTTACCAAGACGCTGGCGCCGAAGCGT GTCAGATTTTCTCCCGGAATGTTGATTAAGCAGAGCCAGGACGATGGGGTCGCGGAGGTG GTGACTTGGAAGATCTCGCCGGTGAACCATCGCCTTGGTACGACGAAGTCGAAGCAATTT CTGGGGATGGCGCCCCATCCGTACTCAAGCGAGAAAAATTCCTCCCTTGATGCTATGAAG AAGTGGCATTCATCTCCATTGGGCTTGTCAAGGTGTACTACTTTGGGAAGTAATTCAGGA GTTCTTGGATCTGCTATAGTTGGTTGTGATGGTGTGGGGGATACTCAGAGTCCATTTCGG ACCCCACCATCGCTTTCCTATGGCTGCAACGAGCAAGTGAGCAGTGGTGTAACTTCTGAG GGAGGTGCCGAACCATCGGGAGCAGGGCAGCACAAAAAGGCATTACTTGATCTTCTAGAC CAAGTAGAGGATGCAATCATGGAAGAAGAATTGCCTGCTGATCCTGGAAATAAAGGAGGG CAAACCACGAATGAGGATATCACCAACAATAGCCGTTCTCCTGTTGCTGATACTGACTTA ACTATCCCATCCAAGAAAACTATTCATGTCCCACCCTTCAATAGTTTTCTTGTCTTGGAG GTGTCCGAAAAACATAAAGCTGATGATTCATCATGTGATCGCTACCCTGTTAAGGTTCTG CGTCTGCTGAATGAACACTCTGGTACAGAATGTGCCGTGCATCTGTGTGATGAGTGGTTC GACAGTATTGTTGGGCCTGGTGATACTGTAAATGTCATTGGAGAATTTAGTAACCATGGA AAATGTATTGTTGACCATGACAATAATCTTGTTATTGTCCATCCAGAGCAACTCATTTCC GGGACACGGGCTGCTTCTAGCTTCCAATGTTTAAGAAGGTCTGTTCTCGATGAGAGGCTA AAAAGCAATGAATATTCTACCAGCGCGTTGACTGGTACTCTGCTTCACCAAGTCTTTCAG GCTGGATTACTCAATGATGCTCCTTCATGGCAGTTTTTGGAACAACAGGCAAAGGAAGTA CTTCTGAAAAATATTGAAACTTTATATGCATGTGGAGTCAATGAAAGCAACATGTACTCT ACGCTCATTGAAGCTATCCCCAAAATGTTGAATTGGTTCAAGTGTTTCTTAAAGGGTTCA AAATGTTCTGATGTTGATTTTGGACATAACGAAGTGAGAAAGACTGTTGGAGTGACTGAG GTCATGGATATTGAGGAAATGGCATGGGCACCAAGATATGGTATGAAAGGGGTTATCGAT GCTTCTGTTAGATCAAGAGTTGAGTCACACAATGGTGGTTCATATGATAGAATAATGCCA CTAGAGTTCAAAACTGGCAAAGCAACTAGTGGCCAGGCAGCTATGGAACACTCAGCTCAG GTGATGTTATACACACTGTTGATGACAGAGAGATACTTGAATGAGGATATTGACTTGGGC CTTCTGTATTATCTTCACACAGACCAGACATTGGGCATTAAAGTAAAGAGGACTGATTTA ATTGGGCTAATAATGCGCCGAAACGAGCTTGCTACTGAGATCCTGAAGGCATCGATGTCA CAGAGTTTTCCTCCAATGTTACAGAGCCCATCAACATGTAATAGATGTCGACACCTGATT TCTTGCACCATATATCACAAGGCACACGGAGGCAGTGGTACAACTAGTGGGCTTGGTGAT CTATTTGACAACCTTGTGAATCACTTAACAGTCACACATCATAATTTTCTTAAACATTGG GATAGATTGATTGATCTTGAAGCTAGAGCTTCTCAGGTAAAAAAGAACATCTTGCAGCCT CATAATTCAAACTATGGGAGTGGGAGTTCTGCTGTACCTTATTTTGTTCTTGACATAAAA AATGGACATTCAATAGATTCTTCAGGAAAAAGCAAAAGATACATATATAATTTTGTTCAG CAAAAGATGCAGCCTGAAACAGCTGATCAGTTAGATGCTCAATTTGACAGCATAGATTTC AGCCTGAAAGTTGGTGATTTTGTGGTGCTTAGCACTCAGTCTGGGAGAATAGCAGTTGCA AATGGATGTATAAGAGAAATAATAAGTCACTCTCACATAACGGTCTCTTTGCCACGCCGT TTGAGAATTCCAGATAGCAATTCCTTGTCAGAGCAAGAGGATCTGACACGTGAAATTTGG CGGATAGACAAGGATGAATTTAGTTCTTCATTTGGAATAATGAGACTCAACATTGTCCAA CTATTTGCTCAGAATCCACAAAACTCTCACCTGCGCAAGTTGATTGTTGATCTTGAGGCA CCCAGGTTTGATAGCGGAGGTCTGTTTAGCCAAGATCCTGCACTATCATACATAAGGTCA CTACCAAACTTGAATAATGACCAACAAAGGTCACTGCATAAAATTCTAGGAGCAAAGGAT TATGCTCTTATTTTAGGAATGCCTGGAACAGGCAAAACATACACAATGGTGCATGCTGTG AAGTCATTATTGATAAGAGGGGAATCTATTTTGCTAACTTCATATACTAACTCGGCTATT GATACCCTGCTCATGAAGTTGAAGACTGAGGGTGTAGATTTTATTCGGATTGGAAGGCCT GAGGCTGTACATCCTGATGTCAGGGCCCACTGCTTGTCAACAACTGAGGCACAATCGGTT GATGCCATTAAAGCAAGGATGGAGCAAGTACAGGTTGTTGGAGTTACTTGCTTGGGAATG TATCATCCTTTATTAGCACATAAGAAGTTTGACACATGTATCATGGATGAAGCTGGACAA ATTACATTGCCGGTTTCACTGGGACCTTTGATGCTTGCAACAAAGTTTGTTCTAGTAGGA GACCATTATCAACTTCCTCCACTGGTTCAGAGCTCTGAAGCGCGAGAAAATGGGATGGGC ATCAGCTTATTTTGGAGATTGTCAGAAGCACATTCCCAGGCAATTTCAGCACTGCGATGC CAGTACCGTATGTCATCTGGTATCATGGAGCTCTCAAATTCGTTGATTTACGGTAATAGG TTGTGCTGTGGTTCATTGGAAATTGCAAATGCCAAACTCAAGTTTTCTGGTAGAGAACCA ATGCAGTTGAAGTTAAAAGAGATCTTGAATCCCGATAGGGCTGTGATCTTTGCCAACACA GATCAAATACCTGCACTTGAGGCAAAGGAACACAGAACTGTGAACAATCCTACAGAAGCA CACATTATTTCATGGATCATCAAAGAATTACTAAGAAGGGGTGTAGCTCAAGATGCTATT GGTATCATAACCCCATATAACGCTCAAGTGAATATCATTCAGCAATACACTGATTGTTTG GTTGAGGTTCATACGATCGATAAATACCAGGGTAGAGATAAGGAGTGTATAATAGTATCT TTCGTGCGCTCCACTGCAAACTCAAGGGCTAGTGGTTCTTCTCTGCTTGGTGATTGGCAC AGGATCAATGTTCTGTTGACACGTGCAAAGAAGAAGCTCATCATGGTGGGATCACGTGGA ACGCTTTCAACAATACCTTTGCTCAGGCTTCTTGTCGACAAAGTAGCTGAGATTGGTGGC CTGTTGGATTTGACAAATAAGGATGCACATTCTTTTTCGAGAACTTGA

Peptide Sequence

PEP ID	Zm00001d002510_P018
PEP Infomation	pep chromosome:B73_RefGen_v4:2:14289549:14306723:-1 gene:Zm00001d002510 transcript:Zm00001d002510_T018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of nonsense transcripts 1 homolog
Sequence	MPPKKRAAAAASSKKPQPSQPSQPAKFGILHFFERQTQASQNAKRQKPDPPAPPPPPPPP PEKEPSEVSPEVTKTLAPKRVRFSPGMLIKQSQDDGVAEVVTWKISPVNHRLGTTKSKQF LGMAPHPYSSEKNSSLDAMKKWHSSPLGLSRCTTLGSNSGVLGSAIVGCDGVGDTQSPFR TPPSLSYGCNEQVSSGVTSEGGAEPSGAGQHKKALLDLLDQVEDAIMEEELPADPGNKGG QTTNEDITNNSRSPVADTDLTIPSKKTIHVPPFNSFLVLEVSEKHKADDSSCDRYPVKVL RLLNEHSGTECAVHLCDEWFDSIVGPGDTVNVIGEFSNHGKCIVDHDNNLVIVHPEQLIS GTRAASSFQCLRRSVLDERLKSNEYSTSALTGTLLHQVFQAGLLNDAPSWQFLEQQAKEV LLKNIETLYACGVNESNMYSTLIEAIPKMLNWFKCFLKGSKCSDVDFGHNEVRKTVGVTE VMDIEEMAWAPRYGMKGVIDASVRSRVESHNGGSYDRIMPLEFKTGKATSGQAAMEHSAQ VMLYTLLMTERYLNEDIDLGLLYYLHTDQTLGIKVKRTDLIGLIMRRNELATEILKASMS QSFPPMLQSPSTCNRCRHLISCTIYHKAHGGSGTTSGLGDLFDNLVNHLTVTHHNFLKHW DRLIDLEARASQVKKNILQPHNSNYGSGSSAVPYFVLDIKNGHSIDSSGKSKRYIYNFVQ QKMQPETADQLDAQFDSIDFSLKVGDFVVLSTQSGRIAVANGCIREIISHSHITVSLPRR LRIPDSNSLSEQEDLTREIWRIDKDEFSSSFGIMRLNIVQLFAQNPQNSHLRKLIVDLEA PRFDSGGLFSQDPALSYIRSLPNLNNDQQRSLHKILGAKDYALILGMPGTGKTYTMVHAV KSLLIRGESILLTSYTNSAIDTLLMKLKTEGVDFIRIGRPEAVHPDVRAHCLSTTEAQSV DAIKARMEQVQVVGVTCLGMYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVG DHYQLPPLVQSSEARENGMGISLFWRLSEAHSQAISALRCQYRMSSGIMELSNSLIYGNR LCCGSLEIANAKLKFSGREPMQLKLKEILNPDRAVIFANTDQIPALEAKEHRTVNNPTEA HIISWIIKELLRRGVAQDAIGIITPYNAQVNIIQQYTDCLVEVHTIDKYQGRDKECIIVS FVRSTANSRASGSSLLGDWHRINVLLTRAKKKLIMVGSRGTLSTIPLLRLLVDKVAEIGG LLDLTNKDAHSFSRT

Transcript Sequence

Transcript ID	Zm00001d002510_T018
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:14289549:14306723:-1 gene:Zm00001d002510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of nonsense transcripts 1 homolog
Sequence	CCCCACCTCCGCCCGCTTCCCAGTTCCCAGTGCACAGCCGATTCGTCTCCATTCCTATCT TCTCCCATTCCCTCCCCAGTCCGACCTCCGACCCCCCATTTCGTCGCCGCCGCCGTACTC GCCGAGAACCCGCCCCAAATCCATAGGCCCATCCCTTACCCATTAACCCCCAATGCCTCC GAAGAAGCGCGCCGCCGCCGCCGCCTCTTCAAAGAAGCCGCAGCCATCGCAGCCATCGCA GCCCGCCAAGTTCGGTATCCTCCACTTCTTCGAGCGCCAGACCCAGGCCTCCCAGAACGC CAAGCGCCAGAAGCCCGACCCCCCTGCGCCTCCCCCTCCTCCTCCGCCGCCGCCCGAGAA GGAGCCCTCGGAGGTCTCGCCGGAGGTTACCAAGACGCTGGCGCCGAAGCGTGTCAGATT TTCTCCCGGAATGTTGATTAAGCAGAGCCAGGACGATGGGGTCGCGGAGGTGGTGACTTG GAAGATCTCGCCGGTGAACCATCGCCTTGGTACGACGAAGTCGAAGCAATTTCTGGGGAT GGCGCCCCATCCGTACTCAAGCGAGAAAAATTCCTCCCTTGATGCTATGAAGAAGTGGCA TTCATCTCCATTGGGCTTGTCAAGGTGTACTACTTTGGGAAGTAATTCAGGAGTTCTTGG ATCTGCTATAGTTGGTTGTGATGGTGTGGGGGATACTCAGAGTCCATTTCGGACCCCACC ATCGCTTTCCTATGGCTGCAACGAGCAAGTGAGCAGTGGTGTAACTTCTGAGGGAGGTGC CGAACCATCGGGAGCAGGGCAGCACAAAAAGGCATTACTTGATCTTCTAGACCAAGTAGA GGATGCAATCATGGAAGAAGAATTGCCTGCTGATCCTGGAAATAAAGGAGGGCAAACCAC GAATGAGGATATCACCAACAATAGCCGTTCTCCTGTTGCTGATACTGACTTAACTATCCC ATCCAAGAAAACTATTCATGTCCCACCCTTCAATAGTTTTCTTGTCTTGGAGGTGTCCGA AAAACATAAAGCTGATGATTCATCATGTGATCGCTACCCTGTTAAGGTTCTGCGTCTGCT GAATGAACACTCTGGTACAGAATGTGCCGTGCATCTGTGTGATGAGTGGTTCGACAGTAT TGTTGGGCCTGGTGATACTGTAAATGTCATTGGAGAATTTAGTAACCATGGAAAATGTAT TGTTGACCATGACAATAATCTTGTTATTGTCCATCCAGAGCAACTCATTTCCGGGACACG GGCTGCTTCTAGCTTCCAATGTTTAAGAAGGTCTGTTCTCGATGAGAGGCTAAAAAGCAA TGAATATTCTACCAGCGCGTTGACTGGTACTCTGCTTCACCAAGTCTTTCAGGCTGGATT ACTCAATGATGCTCCTTCATGGCAGTTTTTGGAACAACAGGCAAAGGAAGTACTTCTGAA AAATATTGAAACTTTATATGCATGTGGAGTCAATGAAAGCAACATGTACTCTACGCTCAT TGAAGCTATCCCCAAAATGTTGAATTGGTTCAAGTGTTTCTTAAAGGGTTCAAAATGTTC TGATGTTGATTTTGGACATAACGAAGTGAGAAAGACTGTTGGAGTGACTGAGGTCATGGA TATTGAGGAAATGGCATGGGCACCAAGATATGGTATGAAAGGGGTTATCGATGCTTCTGT TAGATCAAGAGTTGAGTCACACAATGGTGGTTCATATGATAGAATAATGCCACTAGAGTT CAAAACTGGCAAAGCAACTAGTGGCCAGGCAGCTATGGAACACTCAGCTCAGGTGATGTT ATACACACTGTTGATGACAGAGAGATACTTGAATGAGGATATTGACTTGGGCCTTCTGTA TTATCTTCACACAGACCAGACATTGGGCATTAAAGTAAAGAGGACTGATTTAATTGGGCT AATAATGCGCCGAAACGAGCTTGCTACTGAGATCCTGAAGGCATCGATGTCACAGAGTTT TCCTCCAATGTTACAGAGCCCATCAACATGTAATAGATGTCGACACCTGATTTCTTGCAC CATATATCACAAGGCACACGGAGGCAGTGGTACAACTAGTGGGCTTGGTGATCTATTTGA CAACCTTGTGAATCACTTAACAGTCACACATCATAATTTTCTTAAACATTGGGATAGATT GATTGATCTTGAAGCTAGAGCTTCTCAGGTAAAAAAGAACATCTTGCAGCCTCATAATTC AAACTATGGGAGTGGGAGTTCTGCTGTACCTTATTTTGTTCTTGACATAAAAAATGGACA TTCAATAGATTCTTCAGGAAAAAGCAAAAGATACATATATAATTTTGTTCAGCAAAAGAT GCAGCCTGAAACAGCTGATCAGTTAGATGCTCAATTTGACAGCATAGATTTCAGCCTGAA AGTTGGTGATTTTGTGGTGCTTAGCACTCAGTCTGGGAGAATAGCAGTTGCAAATGGATG TATAAGAGAAATAATAAGTCACTCTCACATAACGGTCTCTTTGCCACGCCGTTTGAGAAT TCCAGATAGCAATTCCTTGTCAGAGCAAGAGGATCTGACACGTGAAATTTGGCGGATAGA CAAGGATGAATTTAGTTCTTCATTTGGAATAATGAGACTCAACATTGTCCAACTATTTGC TCAGAATCCACAAAACTCTCACCTGCGCAAGTTGATTGTTGATCTTGAGGCACCCAGGTT TGATAGCGGAGGTCTGTTTAGCCAAGATCCTGCACTATCATACATAAGGTCACTACCAAA CTTGAATAATGACCAACAAAGGTCACTGCATAAAATTCTAGGAGCAAAGGATTATGCTCT TATTTTAGGAATGCCTGGAACAGGCAAAACATACACAATGGTGCATGCTGTGAAGTCATT ATTGATAAGAGGGGAATCTATTTTGCTAACTTCATATACTAACTCGGCTATTGATACCCT GCTCATGAAGTTGAAGACTGAGGGTGTAGATTTTATTCGGATTGGAAGGCCTGAGGCTGT ACATCCTGATGTCAGGGCCCACTGCTTGTCAACAACTGAGGCACAATCGGTTGATGCCAT TAAAGCAAGGATGGAGCAAGTACAGGTTGTTGGAGTTACTTGCTTGGGAATGTATCATCC TTTATTAGCACATAAGAAGTTTGACACATGTATCATGGATGAAGCTGGACAAATTACATT GCCGGTTTCACTGGGACCTTTGATGCTTGCAACAAAGTTTGTTCTAGTAGGAGACCATTA TCAACTTCCTCCACTGGTTCAGAGCTCTGAAGCGCGAGAAAATGGGATGGGCATCAGCTT ATTTTGGAGATTGTCAGAAGCACATTCCCAGGCAATTTCAGCACTGCGATGCCAGTACCG TATGTCATCTGGTATCATGGAGCTCTCAAATTCGTTGATTTACGGTAATAGGTTGTGCTG TGGTTCATTGGAAATTGCAAATGCCAAACTCAAGTTTTCTGGTAGAGAACCAATGCAGTT GAAGTTAAAAGAGATCTTGAATCCCGATAGGGCTGTGATCTTTGCCAACACAGATCAAAT ACCTGCACTTGAGGCAAAGGAACACAGAACTGTGAACAATCCTACAGAAGCACACATTAT TTCATGGATCATCAAAGAATTACTAAGAAGGGGTGTAGCTCAAGATGCTATTGGTATCAT AACCCCATATAACGCTCAAGTGAATATCATTCAGCAATACACTGATTGTTTGGTTGAGGT TCATACGATCGATAAATACCAGGGTAGAGATAAGGAGTGTATAATAGTATCTTTCGTGCG CTCCACTGCAAACTCAAGGGCTAGTGGTTCTTCTCTGCTTGGTGATTGGCACAGGATCAA TGTTCTGTTGACACGTGCAAAGAAGAAGCTCATCATGGTGGGATCACGTGGAACGCTTTC AACAATACCTTTGCTCAGGCTTCTTGTCGACAAAGTAGCTGAGATTGGTGGCCTGTTGGA TTTGACAAATAAGGATGCACATTCTTTTTCGAGAACTTGAAGTTCTTGTTTGAATGCACA ATAGGATGCACGGTAGATGAATCTGGAAGGTTTTTATAAGGCCAAGCTGTAAATAAGAAT ATGCTGTAAATTTTGTTTTTGGAAATGTATAGTAAACCTAG