Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002490_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:13898546:13900702:1 gene:Zm00001d002490 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastid-specific 30S ribosomal protein 2

Sequence

ATGGCGCTCTCGCTCGCGCGCAGCCCCAACCCCGCCGCGGCGCTCCCCGCCCCGCGTGTT
CCCCACTTTGCCCTTCCTCTCCTCACGCTCCGCTGCCCTCGCCGCCAGAACCAGGCACGC
CTCCGCGTCGCAGCATCCTCGCCCCCGGAGGCGCAGGCTGCCCCCGTGGCGGAGGATGAG
CAGGGGGAGAAGCGGCGGAAGCTATACGTTGCCAACCTGCCCTGGTCGTTCCCGGCGCCG
GAGATCGAGAAGCTCTTCGCGCAGCACGGCACTGTCAAGGACGTCGAGGTCATCAAGGGG
AAGGATGGAAGAAACAGGGGGTTCGCGTTCGTGACGATGTCGACAGCGGAGGAGGCGGCC
GCCGCCGCTGATAAGCTTAACTCCCATGATGTAATGGGGCGGACAATCAAGGTGGAGTTT
TCAAAGAGCTTCAGAAGACCAGCTCCGCCTCCTCCTCCAGGCACTATTATAGAGAGGCAC
AAGCTTTACGTGTCCAATCTCCCATGGAAAGCAAGGGCTCCCAATGTTAAAGAATTCTTT
GCAAACTTTAACCCGCTTTCTGCTAACGTTATATTCGACAATGGAAAAGCAGCTGGGTAC
GGTTTCGTTTCCTTTGGGACAAAAGAAGAAGCAGAGGCTGCTCTCACTGAGCTTGATGGA
AAGGAACTTCTGGGAAGGCCTGTACGCTTGAATTGGCGGGAAAGTGGTGATGATAAGGTT
GAAGTTGCAAAGGCTGACAGTGAAGTTGAAGCTGTAAATATTGAAGGAGCATGCGTTGAT
GATGCCAGCACGGATGGAGGTGAAGATAAACAGGAATAG

Peptide Sequence

PEP ID

Zm00001d002490_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:13898546:13900702:1 gene:Zm00001d002490 transcript:Zm00001d002490_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastid-specific 30S ribosomal protein 2

Sequence

MALSLARSPNPAAALPAPRVPHFALPLLTLRCPRRQNQARLRVAASSPPEAQAAPVAEDE
QGEKRRKLYVANLPWSFPAPEIEKLFAQHGTVKDVEVIKGKDGRNRGFAFVTMSTAEEAA
AAADKLNSHDVMGRTIKVEFSKSFRRPAPPPPPGTIIERHKLYVSNLPWKARAPNVKEFF
ANFNPLSANVIFDNGKAAGYGFVSFGTKEEAEAALTELDGKELLGRPVRLNWRESGDDKV
EVAKADSEVEAVNIEGACVDDASTDGGEDKQE

Transcript Sequence

Transcript ID

Zm00001d002490_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:13898546:13900702:1 gene:Zm00001d002490 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastid-specific 30S ribosomal protein 2

Sequence

CCCAGTTCCCAGCCCGAACCACCGGCGACGCACGCTCCGCTTCGCTATGGCGCTCTCGCT
CGCGCGCAGCCCCAACCCCGCCGCGGCGCTCCCCGCCCCGCGTGTTCCCCACTTTGCCCT
TCCTCTCCTCACGCTCCGCTGCCCTCGCCGCCAGAACCAGGCACGCCTCCGCGTCGCAGC
ATCCTCGCCCCCGGAGGCGCAGGCTGCCCCCGTGGCGGAGGATGAGCAGGGGGAGAAGCG
GCGGAAGCTATACGTTGCCAACCTGCCCTGGTCGTTCCCGGCGCCGGAGATCGAGAAGCT
CTTCGCGCAGCACGGCACTGTCAAGGACGTCGAGGTCATCAAGGGGAAGGATGGAAGAAA
CAGGGGGTTCGCGTTCGTGACGATGTCGACAGCGGAGGAGGCGGCCGCCGCCGCTGATAA
GCTTAACTCCCATGATGTAATGGGGCGGACAATCAAGGTGGAGTTTTCAAAGAGCTTCAG
AAGACCAGCTCCGCCTCCTCCTCCAGGCACTATTATAGAGAGGCACAAGCTTTACGTGTC
CAATCTCCCATGGAAAGCAAGGGCTCCCAATGTTAAAGAATTCTTTGCAAACTTTAACCC
GCTTTCTGCTAACGTTATATTCGACAATGGAAAAGCAGCTGGGTACGGTTTCGTTTCCTT
TGGGACAAAAGAAGAAGCAGAGGCTGCTCTCACTGAGCTTGATGGAAAGGAACTTCTGGG
AAGGCCTGTACGCTTGAATTGGCGGGAAAGTGGTGATGATAAGGTTGAAGTTGCAAAGGC
TGACAGTGAAGTTGAAGCTGTAAATATTGAAGGAGCATGCGTTGATGATGCCAGCACGGA
TGGAGGTGAAGATAAACAGGAATAGTAAAAAAAAATATTATAGTGGCCTACGGCAAGAAA
GTTTCATCTGCCTTATTGGTATGCACACAGATGTGGAGCCTTGTTGTACAGTTACAGTTT
TTTTTTTCCTACACTACCTGGTGAGTGAGTGCATGATCATTGTGCCTATAAGTGCACTTA
CTACTCATGGTTGGTATTTGAACTAATTTGTTTCTGTGGAAAATTTAATTCCACGACATC
ATCGGAATTCTTCTAATTGAATGTACACTTTCGG