Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002456_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:13192358:13197224:1 gene:Zm00001d002456 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein AE7
Sequence

ATGATTTTATGGTATAATTTTGTTGTGCACTTTGAACAAAATACTGCTGCTAACACAGTT
TCATTTGTTTCGACTTGCAGGAATTTGTTTTCCTCATCTAAAGTTACTGCATTGTATTCC
ATAGAAATGGCTATGGGGTTGATTAATGCTAATCCTATAATCCATGAGAAAAAAGAAAGA
CGCATCCGACAGGCACCAGAGACCACAGATGAAAATGCGGTAGAGTCCATAGACCAGCTG
GAAATATTTGATATCCTTCTTAATGATTTCCCTTATATAAATGTAGTGAAGCTTGCCTTT
TCATTTATCTGTGAATCCTCTATCCTAGCAATTTGGTTGTTGCGGTCCTTAACGTTCTTA
CATCACATTAGAGATATAAAGGATCCAGAGCACCCATACTCACTGGAACAGCTTAATGTG
GTGACTGAAGACTCAATTGAACTCAATGATGAAAGCAATCATGTCAGGGTTATTTTCACC
CCAACAGTGGAGCACTGCAGTATGGCAACTATTATTGGCCTTTGCATACGTGTGAAACTT
GTACGGAGTCTCCCTCCTTATTACAAGGTGGACATAAGGGTTGCCCCTGGATCACACGCA
ACTGAAGCTGCTGTGAATAAGCAACTGAATGACAAAGAACGTGTTGCGGCTGCATTGGAA
AACCCAAACCTACTGGACATGGTTGAAGAGTGCTTATCACCAACATTCGATTGA

Peptide Sequence

PEP ID

Zm00001d002456_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:13192358:13197224:1 gene:Zm00001d002456 transcript:Zm00001d002456_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein AE7
Sequence

MILWYNFVVHFEQNTAANTVSFVSTCRNLFSSSKVTALYSIEMAMGLINANPIIHEKKER
RIRQAPETTDENAVESIDQLEIFDILLNDFPYINVVKLAFSFICESSILAIWLLRSLTFL
HHIRDIKDPEHPYSLEQLNVVTEDSIELNDESNHVRVIFTPTVEHCSMATIIGLCIRVKL
VRSLPPYYKVDIRVAPGSHATEAAVNKQLNDKERVAAALENPNLLDMVEECLSPTFD

Transcript Sequence

Transcript ID

Zm00001d002456_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:13192358:13197224:1 gene:Zm00001d002456 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein AE7
Sequence

GTCTCGCTGCCGTCCTAGGTTTGGAGCCAGGTCACCGGCGCTAGGAGGGCGTGAAATCGA
GTCGACGGTCGGCACTCGGCACTCACGCGTTCTCCACCTACTGCTGGCGCTCCTGTGAGG
CGACGCCGGACCGGCCACCCCGCATGCGAACAGCGCACGGACCGGCCACCGGTGTGACCC
CTCCATCCAAGGCTTCAGCTCCAGACCGAGCCGCCCCGCCAATCGCCGTCCGCCGAACCG
CCTAGGTGAGCCGTGATCGTGAGTGTCCTCTGTCTCCAGTATCTTCTGTAGCTGTAGGAA
CAGACGGCTAGTTGATGTACAATTGTCCAGAGTAGAAACAGCTACAGAATTCCCTTCAAT
TTCTCTCCCAAATCCTGGCGTGAGCGCTATGGGAAGATGAACACGCGAGGCCGAATTAGG
TGTATTTCTGTATTAGATGACCCAGTTTAACTTGACTTGGCTGATGGCAATGGCCGAACT
GCCAAATAGCCCAAGCTGGAGCGAGATCGGTTCTTTTCAGCCCTTTCCGTTTGTGTCATC
CAGTGTGAGCACCTCCCACTGATCACTTCATACTTCGAGCGCTGCCATAGCCATTGGTGA
ACATGAATTCGGGCCGCCGGCTTCAGCCATTGGGGGGTGGGTAAGGGAAAACATAGGGGG
AAACGAGCTGGCTCATTGACTCTCTCCTGCGGCGGCCGCTAAATTTCATCCTCTAAATGA
ATATTTTATGTCCTTTACAACACTCTCTAAAAGATTCCGTTCTTTATTCTTTCTTCTCCA
TTTCCAGCAATGTCCTCTAAATTCGATCCTCTATATCTACGGTACTAACAGATTTCATAA
ATTACATTGTTTTTTAGCCATTTAGCGTACAAACAAAATTTTAATTTCATGTCATGAAAA
AAACATGTTACAATTTTTTTTGTTCAACGGACAAATTATTCACCGTTCATAATTACGAAC
ACAATTTACGTAAACTTTGAATTCTACATTTACTCTTTTTTGCACACAAACAGAAAAAAA
CGTTCGTGTGTGCCTCAATTGAATTATGGAGAACTTCAAAATTTTAAAATTCGTTACATA
CAGTAGACATCAATTAAGCTAATAAAATAGTTCCCACATTTATTTCTATATTATATTAAT
GTACGTCAAATGAAAAGATCGTTCATAGGTCATCATAAGCCTAAACAAAAGCTGTATTCA
TCCAAATGCAAAAAATGAATAGTACGGCGGAGGAGCCCATGGGCCACAGGAAGCAACGAA
CGAAGGCGGCGGAGGGGAGCGAAGAGCGTAGAGGACACTCCACATTTGGAGAACGTCGGC
TGCCTCCGCTATCGTAGCGGGCGGTTTACAATGCATTGCTGGACGTATAGAGGAGCTCAT
GATCCGCTAAATATAGCGAACAGGACGGTTTGCAGGTCCTTGCTGGAGACAGGCACGAGC
GTGGCCTAGGAGGTGAGGACCGAGAGGTGTCAAACCTACAAGTGCTGGCACAACAGCACA
CATGGTTGTCTCCTCCTTTCAAAGAAACGGTACAAACATCTATGTTCCCTGCACTAGTTG
GAACTTTGATTTGTTGAATACTCAAGTTATGTTGGGTTCTTGGAAAAAAAGTGAGTACAA
AATTAGATTGCTCATTAGCCAATTGCATAATTTTATAGATTTGAAGTGTCTTGAGTAGCA
ATTCATAGAGTTGCTTGGCCCCAAGTACCTAACGAAGTGCTAATGCTGATGCTATTGTTT
ATGAGGGAGAAGGGGAATCTGCTTTTGGTAAGCCCCATGTCAGATACTTGTTACATATTC
ACTTAAGTCCTATTTGGTACTTTGTATCCAAAGTTCCAGACTCATCAAGAAACCAGAGAA
GCTGGAGAAGGCACGCTTATGTGGCTTCATCCTCGTAGTAAAAAAAAAAACTGGATGGAG
TTCCTCTTGTGAAACCGTTTCTTAAGTTCACGTTTGAAGAACTTCACCCAAGAAGTCAGA
GAAGCCACAATTGAATCCCCTCAAGAAACCCTGGCCAAACAGGGCCCTAATTATCTACTT
ATGGAATAAAATATTTAATGAAATGAACACCTTCAAACAATGATTTATTTCTTAAATTAA
TAAATACAGGTTATCTATCTTCCGGTGTTTTGATCACTCGATGTAAGGTGAGTTATATGG
ATGATGGAATAAAATTCCTTTGAGAGTGAGGGAGGGAGGGAGGCTTCTCCCAGTCCCCAC
CTCCGGTTACAGGCTATCTGCCGCCTCCAGCCTCTCCCCACCTGCGCCGCCACCGACTTC
CTCCCCTCACCCTTCCGGTGGTACACAGGTGGGAGTGGGAGAGGCGAGCGACCAAGCACA
CGTAGGAGAGGGAGAGGCGGACATCAGAGCAACAGTGGGGGAGGCAGCACCGTACCAGAC
TTCACATGGCAACTTGTAGATGAAGCTGTAGGTGCAAGTGAAGCTCTTTGAGGTCGTAAT
TTTCCAAGGAAAGCTCGTGGGAACAGTAGCAATCGTTCCAGGAACTGCACACCAGATGTT
GATGATGATATTTTAGATTTCATTGAGGAACAAGATGAAGAACAGCTGGATGATGAGGAA
GAAGATCCACATGATGATGCAGATGTGATAGATCGTGGGGATGCAACTGATGAGCCCACT
GACGAGGGAGAAAATGCAGCAGCTGCTGATATCTTTGATAGCTTAGATGATTATGAGTGA
CTCGGTGATGGGCATGGCCATTGAGAGAGAGGAACTGGGTGATGTACTGCTGTTTAGGGG
TTGTTATTTGACTAGTGTGTGCTGTAGTTTTATGTGGATTATGTGTGCTGGTATGGACTG
GGTGATGAACAGCAGCAATTGTTCTGTGACTGTAGTTTTGTTATATTGCTAGTGTGTGCT
GGATTATGTGTGCTGAATTACCACTGTTTATGTCACTGCAGTTATATATATGTCTGCAGT
TTTTAATTGTTATAACTTATAAGGTTATTTATAAGGCGTCGCCTCACCGCGCGCTTCATG
CGCCTAGGCGGCTGAAAGGGGTGTGTCGCCTCGCCTTACCGCCTTAAGAACCATGATTTT
ATGGTATAATTTTGTTGTGCACTTTGAACAAAATACTGCTGCTAACACAGTTTCATTTGT
TTCGACTTGCAGGAATTTGTTTTCCTCATCTAAAGTTACTGCATTGTATTCCATAGAAAT
GGCTATGGGGTTGATTAATGCTAATCCTATAATCCATGAGAAAAAAGAAAGACGCATCCG
ACAGGCACCAGAGACCACAGATGAAAATGCGGTAGAGTCCATAGACCAGCTGGAAATATT
TGATATCCTTCTTAATGATTTCCCTTATATAAATGTAGTGAAGCTTGCCTTTTCATTTAT
CTGTGAATCCTCTATCCTAGCAATTTGGTTGTTGCGGTCCTTAACGTTCTTACATCACAT
TAGAGATATAAAGGATCCAGAGCACCCATACTCACTGGAACAGCTTAATGTGGTGACTGA
AGACTCAATTGAACTCAATGATGAAAGCAATCATGTCAGGGTTATTTTCACCCCAACAGT
GGAGCACTGCAGTATGGCAACTATTATTGGCCTTTGCATACGTGTGAAACTTGTACGGAG
TCTCCCTCCTTATTACAAGGTGGACATAAGGGTTGCCCCTGGATCACACGCAACTGAAGC
TGCTGTGAATAAGCAACTGAATGACAAAGAACGTGTTGCGGCTGCATTGGAAAACCCAAA
CCTACTGGACATGGTTGAAGAGTGCTTATCACCAACATTCGATTGAGGTCTCAGTTATTG
CACATCTGGGAGCCATGGTGTTTCATGTTCAGAAGCCACACAAGCTTATTGCCATAGGAA
TTCACTCCTGAATATTATATTTGAGGGCCATGGTGTTTCATGTGCATGATTTTTTTTGTC
CTCCGTCCCTTTGAGTTAATACAATTGTTATCTTTTTGGACATTTGTTGGTGCTTGTGAC
CTCCCTGGGCAAAGGGACATGTAATCAGATCTTGTGTAGTAGCTTTCAGAGCGTTTCCAG
TGCCACGCCATTTTGTGGCTGTGTACCCCCAGTCAACTGAACTTGGTAGGTGAATCCTAG
AATCCTCAAGCACGAGTTGTTTATGTCTCTATACGCAGGAAATGTTTTATCTTCTCAGCT
CAACTGATCATGCTAATTATTTGGCTTGATTGCCTCCTGTTTTTCCCACTGGCAGACCGT
T