Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002428_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:12420571:12421886:1 gene:Zm00001d002428 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

ATGGGTCAAGCCTGGGGTAATCTCCAAGATAGGCTCCAAGGGCGGCGGTGGAAGGAGCAC
CAGGTGAGGAAGATCACCGACAAGGTGTTCGACCGCCTCACGGAGGACGCCCAGAAGCGC
GACAAGGAGGCCCTCAGATTCGAGGAGGTCTACATCGCCGTCCTCTGCGTCTACAATGAC
ATCAATAAGTACTTGCCGGGGCCGCACCACGACCCCCCGTCCAAGGAGAAGCTCAGGGCC
ATGATGGAGGAGTACGACGTGAACCTGGACGGGCTCCTGGACCGCGAGGAGTTCGCGGAG
TTCATCCGGAAGCTGACCGCGGACTCGCTGTGCTCGATCAGCGTGAAGCTGCTGATCACG
CTGGTGGCGGCGCCGGCGCTGGCGATGGCGACCAAGCGGGCGACGGAGGGCGTCCCCGGC
GTGGGCAAGGTGGTACGCAAGGTGCCCAACGCGCTCTACGCCTCCGCCATCACCCTGGGC
GTTGTGCTGTTGCAGAGATCAACCGAGGGCGTCGAGTGA

Peptide Sequence

PEP ID

Zm00001d002428_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:12420571:12421886:1 gene:Zm00001d002428 transcript:Zm00001d002428_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

MGQAWGNLQDRLQGRRWKEHQVRKITDKVFDRLTEDAQKRDKEALRFEEVYIAVLCVYND
INKYLPGPHHDPPSKEKLRAMMEEYDVNLDGLLDREEFAEFIRKLTADSLCSISVKLLIT
LVAAPALAMATKRATEGVPGVGKVVRKVPNALYASAITLGVVLLQRSTEGVE

Transcript Sequence

Transcript ID

Zm00001d002428_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:12420571:12421886:1 gene:Zm00001d002428 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

ATACACCTCATCGATATAGCTTTATTTCCCTTGCCCTTTTCCAGGGCACACCCCCTCCAG
CTCTCCGCCGTCGGCCATGGGTCAAGCCTGGGGTAATCTCCAAGATAGGCTCCAAGGGCG
GCGGTGGAAGGAGCACCAGGTGAGGAAGATCACCGACAAGGTGTTCGACCGCCTCACGGA
GGACGCCCAGAAGCGCGACAAGGAGGCCCTCAGATTCGAGGAGGTCTACATCGCCGTCCT
CTGCGTCTACAATGACATCAATAAGTACTTGCCGGGGCCGCACCACGACCCCCCGTCCAA
GGAGAAGCTCAGGGCCATGATGGAGGAGTACGACGTGAACCTGGACGGGCTCCTGGACCG
CGAGGAGTTCGCGGAGTTCATCCGGAAGCTGACCGCGGACTCGCTGTGCTCGATCAGCGT
GAAGCTGCTGATCACGCTGGTGGCGGCGCCGGCGCTGGCGATGGCGACCAAGCGGGCGAC
GGAGGGCGTCCCCGGCGTGGGCAAGGTGGTACGCAAGGTGCCCAACGCGCTCTACGCCTC
CGCCATCACCCTGGGCGTTGTGCTGTTGCAGAGATCAACCGAGGGCGTCGAGTGACTCGC
GCTGCTGAAACTGCAATGTCGTCGGCTGTGTAGATGGAGCAGCGTATCTAGGATAGGTGT
TGGTTCTTTACGGCTTGTGCGGTGAATTGATCTGTGTATCAATTCGATGTGATTTATCCT
GGATTTGGGACAAATAGTTGTGGATCCTTGTGAATTGTCTTGCTTTTTTACCTTTAAGAT
CCGGAACAAGGCTCAATAAGAAGAGAGAGAGTTACATGCGTCAGCGGCGC