Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002348_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:10671529:10673482:1 gene:Zm00001d002348 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate-binding X8 domain superfamily protein
Sequence

ATGGCGCGCAAGGACACAGTGCCGCTTGTCACTGCTTCCGGCTTCGTGGTGGCGTCGCTG
CTGCTCCTGCTCTGCGCCACTCGCTGCGAAGCGAGGGTCATGGCGGCGAGCAGGAGCAGG
AGCAGGAGCACCAGCCCGCTGCTCAACGTGCTGTTCAAGCTCAACTTCATCCGCACGGTG
GAGCCACCGCGCCGACTTCCCACTCCGACCGCCGACGCCACCGTCAGCCTCGCCGCGGGC
GACACCAACTCGCCGTTCTGCGTCAACCCACCAGACGCGCCGTCGTCCACGACGCCTCCG
TCCACGTCATCCACGTCATCCACGACGCCTCCGTCCACGTCGTCCACGCCTTCGTTGCCG
GGCCAGGCCCAGGCGCCGCCGCTGCCGCCGATCACCCCCGTGCCGCCGTCCTTCGAGCCC
AGCCCGCCGGAGAACGGCGCCCCGGGTGGAGGCCAGGGAGGAGGAGATCAAGGCCAGGGA
GGAGGAGGTCAAGGCCAGGGAGGCCCACCGGCATCCACGACACCGAACTCGCCGCCGCAG
GCAGGTCCGGGAGCGCCGTTTGGGTCGGTGCCGCCGAGCCCCATCGTCATGGTGCCGAGC
CCGCCAGGATTCGGCCCTGGTCCCGGCTCCGGCTCAGGCGGTGGCTCGGGATCCGGCGAC
GGCGGCGGCCCGTTCCAGCCGCCGATCGTGTACCCACCTCCGCTGGCGCCGCCGATGCTG
CCGGGCGCCGGGCAGACGCTGTGGTGCGTGGCCAAGCCCACGGTGCCGGACCCCATCATC
CAGGAGGCCATGGACTACGCGTGCGGCTCCGGCGCCGAGTGCGACTCCATCCTGCCCAGC
GGCGCGTGCTACCACCCCAACACCGTGCTCGCGCACGCCTCCTTCGCGTTCAACAGCTAC
TGGCAGCAGAACAAGGCGACCGGCGGCACCGCCACCATTATCACCAGAGACCCGAGCTAC
GAGAAGTGCAAATTTGACCTTCTGTGA

Peptide Sequence

PEP ID

Zm00001d002348_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:10671529:10673482:1 gene:Zm00001d002348 transcript:Zm00001d002348_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate-binding X8 domain superfamily protein
Sequence

MARKDTVPLVTASGFVVASLLLLLCATRCEARVMAASRSRSRSTSPLLNVLFKLNFIRTV
EPPRRLPTPTADATVSLAAGDTNSPFCVNPPDAPSSTTPPSTSSTSSTTPPSTSSTPSLP
GQAQAPPLPPITPVPPSFEPSPPENGAPGGGQGGGDQGQGGGGQGQGGPPASTTPNSPPQ
AGPGAPFGSVPPSPIVMVPSPPGFGPGPGSGSGGGSGSGDGGGPFQPPIVYPPPLAPPML
PGAGQTLWCVAKPTVPDPIIQEAMDYACGSGAECDSILPSGACYHPNTVLAHASFAFNSY
WQQNKATGGTATIITRDPSYEKCKFDLL

Transcript Sequence

Transcript ID

Zm00001d002348_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:10671529:10673482:1 gene:Zm00001d002348 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate-binding X8 domain superfamily protein
Sequence

GCAGACTGCAGTGCACAGGGACCGTACCGGGGAGGGCCGGCGGCAGCCATGGCGCGCAAG
GACACAGTGCCGCTTGTCACTGCTTCCGGCTTCGTGGTGGCGTCGCTGCTGCTCCTGCTC
TGCGCCACTCGCTGCGAAGCGAGGGTCATGGCGGCGAGCAGGAGCAGGAGCAGGAGCACC
AGCCCGCTGCTCAACGTGCTGTTCAAGCTCAACTTCATCCGCACGGTGGAGCCACCGCGC
CGACTTCCCACTCCGACCGCCGACGCCACCGTCAGCCTCGCCGCGGGCGACACCAACTCG
CCGTTCTGCGTCAACCCACCAGACGCGCCGTCGTCCACGACGCCTCCGTCCACGTCATCC
ACGTCATCCACGACGCCTCCGTCCACGTCGTCCACGCCTTCGTTGCCGGGCCAGGCCCAG
GCGCCGCCGCTGCCGCCGATCACCCCCGTGCCGCCGTCCTTCGAGCCCAGCCCGCCGGAG
AACGGCGCCCCGGGTGGAGGCCAGGGAGGAGGAGATCAAGGCCAGGGAGGAGGAGGTCAA
GGCCAGGGAGGCCCACCGGCATCCACGACACCGAACTCGCCGCCGCAGGCAGGTCCGGGA
GCGCCGTTTGGGTCGGTGCCGCCGAGCCCCATCGTCATGGTGCCGAGCCCGCCAGGATTC
GGCCCTGGTCCCGGCTCCGGCTCAGGCGGTGGCTCGGGATCCGGCGACGGCGGCGGCCCG
TTCCAGCCGCCGATCGTGTACCCACCTCCGCTGGCGCCGCCGATGCTGCCGGGCGCCGGG
CAGACGCTGTGGTGCGTGGCCAAGCCCACGGTGCCGGACCCCATCATCCAGGAGGCCATG
GACTACGCGTGCGGCTCCGGCGCCGAGTGCGACTCCATCCTGCCCAGCGGCGCGTGCTAC
CACCCCAACACCGTGCTCGCGCACGCCTCCTTCGCGTTCAACAGCTACTGGCAGCAGAAC
AAGGCGACCGGCGGCACCGCCACCATTATCACCAGAGACCCGAGCTACGAGAAGTGCAAA
TTTGACCTTCTGTGACGAGGGAGGGTACGTAGATATGCAGGAGAACAGACTGCAGATACC
AAATTTTTTCCCCAAGCTTCAGTTGGAGTTAACATTCATTTTGCTTCTAGGCCACACCGA
TGCACATTTTGTAACTAGCTCTTCTTCACTAGTATGGTTTTGAATTTTGTAAGCCTGATA
CTGCGCAAAAGGGGAAACTAAAGGTGATTCCTTGACATATTTGATATACAAGCTCTTGCT
CAGACTGC