Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002323_T025
CDS Infomation

cds chromosome:B73_RefGen_v4:2:10211514:10217159:-1 gene:Zm00001d002323 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence

ATGATTCCAAATGATGTACACAATGTTCTAATTCCCAAACATACATGCATGCCATGGTCT
GATTCCCAAACATACTTGCTATGTTGTAATGAGCCTGCAGAGACATTTGTACGCGCCGAC
GGGGCATTCATCCCATTTGCTCACGACTTCGACATCTCCACAGTCACAACTACAGTTAGG
GGTGTTGGTGACATTGGGGATGTTAAGGTTATAGATCTGCAGAGTCCACTTAATAGCCTC
ATAGGGAGGCAAGTATGCAAAATCGGCAGAAGTTCTGGTCACACAACTGGAACTGTGGTG
GCTTATGCCCTTGAGTACAATGACGAGAAAGGAATAAGCTTCTTCACTGACCTCCTTGTT
GTCGGCGAAAACCGCCAAACTTTTGATCTAGAAGGTGATAGTGGAAGCCTTATTATCCTG
ACTGGCCAGGATAATGAGAAGCCGTGTCCCATTGGGATAATATGGGGTGGCACAGCAAAC
CGTGGGAGGCTAAAGCTTAGGTGTGACCATGGCCCTGAAAATTGGACCAGTGGAGTTGAT
CTTGGCCGCCTTCTGGATCGTCTTGAACTTGACCTTATCATAACCAATGAATCACTCAAA
GAATTTATCCTCGATAAAGATGCCGTGCAGCAGCAAAGGCTCGCGTTGGTGGCTGCAGCT
AACTCTGCTGTTGGGGAGTCGTCGACAGCAGCTGTTCCTGCCCCAGAAGAAAAGGTGGAG
ATCTTCGAGCCTCTGGGGATCAAAATCGAGCAGCTGCCTCGGCACGACGTTTCGGCGACG
ACGGAAGGGGATGAGGCAGCTGTGATCAATGTGGAAGAGCGCCAGTTCATCTCAAACTTT
GTCGGCATGTCCCCTGTACGCGACGACCAGGATGCTCCGAGGCAAATCGCGAACCTGAAC
AATCCGTCAGAGGAAGAACTCGCCATGTCGCTTCACCTAGGTGACCGGGAGGCCAAGCGG
CTTCGCACTGACACAGAATCCGAGCTTGACCTGGAGAAGTGA

Peptide Sequence

PEP ID

Zm00001d002323_P025
PEP Infomation

pep chromosome:B73_RefGen_v4:2:10211514:10217159:-1 gene:Zm00001d002323 transcript:Zm00001d002323_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence

MIPNDVHNVLIPKHTCMPWSDSQTYLLCCNEPAETFVRADGAFIPFAHDFDISTVTTTVR
GVGDIGDVKVIDLQSPLNSLIGRQVCKIGRSSGHTTGTVVAYALEYNDEKGISFFTDLLV
VGENRQTFDLEGDSGSLIILTGQDNEKPCPIGIIWGGTANRGRLKLRCDHGPENWTSGVD
LGRLLDRLELDLIITNESLKEFILDKDAVQQQRLALVAAANSAVGESSTAAVPAPEEKVE
IFEPLGIKIEQLPRHDVSATTEGDEAAVINVEERQFISNFVGMSPVRDDQDAPRQIANLN
NPSEEELAMSLHLGDREAKRLRTDTESELDLEK

Transcript Sequence

Transcript ID

Zm00001d002323_T025
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:10211514:10217159:-1 gene:Zm00001d002323 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence

GCATCACACGGGCGCAACAGTATTTTAGCTGCTGCTCGTCTCATCTCTGAGACTCTGACC
CAGTGACCATGATCACCTAGCCGAGCTCCGTCCCTCCATCTGCCTCTCTCTCTTTCTTCC
CGCGGCCTGTGCCCCCAGATTGCCGCGGCCTCCGGCTCCGCCCCTCTCCTCCAGCACCAG
CAGTCCATCTCCGGCTCTCTTCCCTCTCGTTAGGCGCTAGCTAGGCTCTAGCCCCTAGTC
TGGTCCTGCCCGCTGTGCCTGTGCGGCTGTGCGTGCACAGCGAAGGCGCACAGCTAGCGG
CTTCTGGCCACTGGGCGTCGCCATAAACAGTGGAGATTCCCGCCCCCATTTTCCCAATTA
TGGATATCCAGCGGCGACCGGGGGAGCACTGCTGAGGCCGCTCGCCCGCCCGCACGCCAT
TGCTCCCGTCGAGGGTCACAACTTATCCTACACATCGTAGCTCCGCGACCTGTTCGGCAA
AATGAGGCCTTCAGATGGCAGGACGCAGCTTTCAGGCTTTGCACAATCAGATGAATCAAC
ACTTGATGTGGAGGGGCATTGCTACCACCAGCAGTCATTCCCTTCCTCTCCATCGATGCA
ACCGATTGCTTCTGGCTGCACACACACAGAGAACAGCGCTGCGTACTTCTTATGGCCAAC
ATCAAACCTGCAGCATTGTGCAGCCGAGGGACGCGCAAACTACTTCGCCAACCTTTCAAA
GGGACTGTTGCCCAAGTCTGGCCGGTTGCCCAAGGGCCAGCAAGCAAATAGCTTGCTTGA
CTTGATGACTATAAGAGCTTTCCATAGCAAGGTGTTGCGTTGCTTTAGCCTTGGAACGGC
GGTGGGCTTCCGCATCAGGAAAGGGGCTCTGACAGATATCCCCGCGATTCTTTGCTTTGT
TGCTCGCAAAGTTCACAAGAAGTGGCTTAATCCGGACCAATGCCTTCCTGCCATTGTTGA
GGGTCCAGGAGGTATTTGGTGTGATGTTGACGTTGTTGAGTTCTCGTACTACGGTGCACC
AGCTCAAAATCCAAAAGTGCAAATGTTCACTGAGCTTGTTGATAAGTTGTGTGGCAGTGA
TGAATGTATTGGCTCTGGCTCTCAGGTTGCAAGTCAGGACACTTTTGGAACTTTGGGCGC
CATTGTAAAACGGCGAACTGGCAACAAGCAGATAGGTTTCCTCACCAACCGACATGTTGC
TGTTGACTTGGACTACCCAAACCAGAAGATGTATCACCCATTGCCACCCAACCTTGGGCC
TGGTGTTTATCTTGGAGCTGTCGAAAGGGCAACATCTTTCATCACAGATGATGTTTGGTA
TGGAATCTATGCTGGAACAAACCCAGGTAGAGCAGTTATAAATTATGCGGTTAATATAGG
AGATTAAGTATTACTTGCAGCTTTAATTGCTTGGTTATTTATCTATATATTTAAATTTTC
ATGAGATGGCGTTATTGCTTGATCTTTTCATATCAAGCAAGGCTTGACATTTGTGATTTT
ATATTAATATTTTCAATCAAATTAACACTCAAACTTGCTCTTCAGTTTACTACTTGCAAA
TAAAGCAACATCCATTTTTGTTATTTTTATGAGAAAATAAAATACAAGTTAGGACTATCT
CTGAATAAATAAAAGACTCCTGGTCATAGATACATGTTGTTTTAGGATAATATCTGGTGA
AAACATCAAATTTATCTGGTTTAGAAACATGTTAATATATGTCTAGATTTTTGTTTGAAA
ATACTTGCAAAATCTCGTGATTTCAAGAATTTTTAGAATATGTTCTAGAAGAAATTGGTG
GTGAAAGAAAATATCAAAACCGTGCAAAGACAAATGTGACAACTATTTTTCACGGGAGGG
AGAATTCCTTGCTTTTTATCACTCTAATCATGCAGTACATTTACTTTTTCTTCTTTTTTC
CTGCTGATGATTCCAAATGATGTACACAATGTTCTAATTCCCAAACATACATGCATGCCA
TGGTCTGATTCCCAAACATACTTGCTATGTTGTAATGAGCCTGCAGAGACATTTGTACGC
GCCGACGGGGCATTCATCCCATTTGCTCACGACTTCGACATCTCCACAGTCACAACTACA
GTTAGGGGTGTTGGTGACATTGGGGATGTTAAGGTTATAGATCTGCAGAGTCCACTTAAT
AGCCTCATAGGGAGGCAAGTATGCAAAATCGGCAGAAGTTCTGGTCACACAACTGGAACT
GTGGTGGCTTATGCCCTTGAGTACAATGACGAGAAAGGAATAAGCTTCTTCACTGACCTC
CTTGTTGTCGGCGAAAACCGCCAAACTTTTGATCTAGAAGGTGATAGTGGAAGCCTTATT
ATCCTGACTGGCCAGGATAATGAGAAGCCGTGTCCCATTGGGATAATATGGGGTGGCACA
GCAAACCGTGGGAGGCTAAAGCTTAGGTGTGACCATGGCCCTGAAAATTGGACCAGTGGA
GTTGATCTTGGCCGCCTTCTGGATCGTCTTGAACTTGACCTTATCATAACCAATGAATCA
CTCAAAGAATTTATCCTCGATAAAGATGCCGTGCAGCAGCAAAGGCTCGCGTTGGTGGCT
GCAGCTAACTCTGCTGTTGGGGAGTCGTCGACAGCAGCTGTTCCTGCCCCAGAAGAAAAG
GTGGAGATCTTCGAGCCTCTGGGGATCAAAATCGAGCAGCTGCCTCGGCACGACGTTTCG
GCGACGACGGAAGGGGATGAGGCAGCTGTGATCAATGTGGAAGAGCGCCAGTTCATCTCA
AACTTTGTCGGCATGTCCCCTGTACGCGACGACCAGGATGCTCCGAGGCAAATCGCGAAC
CTGAACAATCCGTCAGAGGAAGAACTCGCCATGTCGCTTCACCTAGGTGACCGGGAGGCC
AAGCGGCTTCGCACTGACACAGAATCCGAGCTTGACCTGGAGAAGTGA