Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002314_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:10148440:10150441:1 gene:Zm00001d002314 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

ATGGCGGGGGCTGCCGAGGGCGCCGGCGCGGAGGCGGTGGAGAGGGCGCACGGGCTCTAC
CGCGGCGGCCGCCACCGGGAGGCGCTGGAGCTCTACTCCGCCGCGCTGGCTGCGGCGCGG
GGCCCCGCGCAGCGCATCGCGCTCCACAGCAACCGCGCCGCCTGCTACCTAAAGCTCCAC
GACTTCCACAAGGCAGCACAAGAGTGTACATCTGTCCTCGAGTTGGATACGGAGCATGCT
GGAGCTCTGATGTTACGTGCCCAGACTCTCGTCACTCTGAAGGATTATCAGTCAGCTCTG
TTTGATGTCAACAGGCTCGTTGAGATAAACCCGTCGTCTGAAGTGTATCGGAACCTGCAG
GCACGATTGAAGACACAGCTATCACTGGCCCCAATTCCTGAGTGCGAAGAGGAGTCCCTT
TGTCGTGAAGAGGAAGACGAAGAACTTCCTCCACGAGTTCAGAAGACCGACACTTCTTCT
ATCGCTAAGCCTGACCAACCAGCAACCAAACTGGTCCTCGAGAACAAACCTTCAGCTGGA
CCAATTCTCCACAGAAAACCTGCAACTGAACCTCTAAAGGCTGTGGTTCCGTCCACTTCG
CCTTCAAAACCCCAGGGTTGGGAAGCCATCCCAAAACCGAAGAGTCATTCAGGCCTTGAC
TACTCAAAATGGGACAAAATTGAAGAGGATTCAAGTGAAGACGAGGACGATGAGGAAGAT
GAGCTGCCACAGTACAAGTTTAAAGTCAGAAGTGTTGGTGTGCGGTCTGTAAAGTGA

Peptide Sequence

PEP ID

Zm00001d002314_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:10148440:10150441:1 gene:Zm00001d002314 transcript:Zm00001d002314_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

MAGAAEGAGAEAVERAHGLYRGGRHREALELYSAALAAARGPAQRIALHSNRAACYLKLH
DFHKAAQECTSVLELDTEHAGALMLRAQTLVTLKDYQSALFDVNRLVEINPSSEVYRNLQ
ARLKTQLSLAPIPECEEESLCREEEDEELPPRVQKTDTSSIAKPDQPATKLVLENKPSAG
PILHRKPATEPLKAVVPSTSPSKPQGWEAIPKPKSHSGLDYSKWDKIEEDSSEDEDDEED
ELPQYKFKVRSVGVRSVK

Transcript Sequence

Transcript ID

Zm00001d002314_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:10148440:10150441:1 gene:Zm00001d002314 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

AATTCAAATCCCCCCTCCGTCATCATCTCGTCTCGTCATACTCCTCGCCCCCCACCTCCA
CCCCCTCGTGATTATCTCCCCGGATTCCAAATCCCATCTCCGATTCACTCGGCCCCAGAG
CCGCCGCCGGGTTCTTCGCGCGGACGATGGCGGGGGCTGCCGAGGGCGCCGGCGCGGAGG
CGGTGGAGAGGGCGCACGGGCTCTACCGCGGCGGCCGCCACCGGGAGGCGCTGGAGCTCT
ACTCCGCCGCGCTGGCTGCGGCGCGGGGCCCCGCGCAGCGCATCGCGCTCCACAGCAACC
GCGCCGCCTGCTACCTAAAGCTCCACGACTTCCACAAGGCAGCACAAGAGTGTACATCTG
TCCTCGAGTTGGATACGGAGCATGCTGGAGCTCTGATGTTACGTGCCCAGACTCTCGTCA
CTCTGAAGGATTATCAGTCAGCTCTGTTTGATGTCAACAGGCTCGTTGAGATAAACCCGT
CGTCTGAAGTGTATCGGAACCTGCAGGCACGATTGAAGACACAGCTATCACTGGCCCCAA
TTCCTGAGTGCGAAGAGGAGTCCCTTTGTCGTGAAGAGGAAGACGAAGAACTTCCTCCAC
GAGTTCAGAAGACCGACACTTCTTCTATCGCTAAGCCTGACCAACCAGCAACCAAACTGG
TCCTCGAGAACAAACCTTCAGCTGGACCAATTCTCCACAGAAAACCTGCAACTGAACCTC
TAAAGGCTGTGGTTCCGTCCACTTCGCCTTCAAAACCCCAGGGTTGGGAAGCCATCCCAA
AACCGAAGAGTCATTCAGGCCTTGACTACTCAAAATGGGACAAAATTGAAGAGGATTCAA
GTGAAGACGAGGACGATGAGGAAGATGAGCTGCCACAGTACAAGTTTAAAGTCAGAAGTG
TTGGTGTGCGGTCTGTAAAGTGAACAGGGTTAGCAATAGATTCAGAGTGTGGTCTGTGTA
CAGTCTAATAGATGCCCACTGACTAGGGTGCCACTTATTCCTCTTTATTAGTTGAGTTAT
TTGGAATGAACAACTATATATTGGTTGATATTTGCTTGAATCAGAGATAAGAGGATCTCC
AAGAGTCTCCCTAA