Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002312_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:10104632:10109656:1 gene:Zm00001d002312 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat transmembrane protein kinase
Sequence	ATGTATCAACGTGATGATGCCAATCTTGGAGCTGCATCCTATTATGTTACAGGAGCACAG ACATGGGGTGTTAGCAATGTGGGCAAGTTCACGGAGGCAGTATACGAAAGTTACATAATC TCCAGCTCACGCCAATTCTACAATACTCTAGATCCAGAACTATTCCAGACAGCAAGGATG TCGGCATCATCTTTGAGATACTATGGTATTGGACTCCAGAACGGAAATTATACCGTCGCA CTTCAATTTGCAGATTTTGACTTTGAAGATTCACAGACTTGGCAGAGTGTTGGGAGAAGG ATTTTTGATATCTATCTCCAGGGTGAGCGTAAGGAGAAGAACTTTGACATAATGAAGGCA GCAGGGGGAAAATCTTACACTGCTGTTGAGAAGCAGTATATTGTTCCTGTCACTAGAAAC TTCCTTGAGATTCATCTTTTCTGGGCCGGCAAGGGCACTTGTTGCATTCCCTTTCGAGGC TACTATGGGCCTGCAATCTCAGCTTTCAGTGTAACGCCAAATTTTAACCCTACAGTGCAG ACCAGTAGGAAAACAGGTATAATTGTTGGAGTCGTGGTTGGTGCAGCAGTTTTGGGAGTA CTAGCACTTGCTGGACTCTGTATGAGGAGGCAGAAAAGGAGAAAATTATTATTGGAGCAA CAGGAACTTTACAGTATTGTTGGAAGACCTAATGTATTCACTTATGGTGAACTAAGGACG TCTACTGAAAATTTTAGTTCCAATAACCTTCTGGGTGAAGGAGGATATGGGTCAGTTTAT AAGGGTAAATTAGCTGAAGGAAGGGTGGTGGCTGTAAAACAGTTATCTGAAACATCTCAT CAAGGAAAACAACAATTTGCTGCCGAAATAGGAACTATTTCTCGAGTGCAACACCGTAAT CTTGTGAAGTTGTACGGTTGCTGCCTTGAGGGAAATAAACCACTGTTGGTTTATGAGTAT CTGGAGAATGGAAGCCTTGATAAAGCATTATTTGGAAGTGGGAGACTGAACCTAGACTGG CCAACACGCTTTGAGATATGTTTGGGCATTGCAAGAGGCATCGCTTATCTCCATGAAGAG TCTAGCATCCGTATTGTGCATAGGGACATAAAGGCTAGCAATATCTTGCTTGACGCAAAT TTCAACCCTAAGATCTCAGATTTTGGGCTCGCCAAACTTTATGACGACAAGAAGACTCAT GTCAGCACAAAAGTTGCGGGTACATTTGGTTATCTTGCACCTGAGTACGCCATGAGAGGT CATATGACCGAGAAAGTTGATGTGTTTGCATTTGGCATGGTCATATTGGAGACCTTAGCC GGAAGACCAAATTTTGACAATATGCTAGATGAAATTAAGGTTTATATATTAGAATGGGTC TGGCAACTGTACGAAGATAAGCACCCTCTGGACATGGTCGACCCCAAGCTCGAAGAATTC AACAGTGGCGAGGTGATCCGTGCCATCCACGTGGCCCTCCTCTGCACCCAGGGCTCGCCA CACCAGCGTCCTTCCATGTCACGAGCGGTGTCGATGCTGGCGGGAGACGTGGAGGTGGGC GAGGTGGTGAACAAACCCAGTTACATCACGGAGTGGCAGATCAAGGGTGGCAACACCAGC AGCTTCATGAGCAACAATGTCAGTGGACAGTCGAGCATGGCACCAAGGTCGTCAGCCTCG CACACCTCGTCGCCGTTCTTGAACTCTGTCATCGAAGAAGGCTGGTGA

Peptide Sequence

PEP ID	Zm00001d002312_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:10104632:10109656:1 gene:Zm00001d002312 transcript:Zm00001d002312_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat transmembrane protein kinase
Sequence	MYQRDDANLGAASYYVTGAQTWGVSNVGKFTEAVYESYIISSSRQFYNTLDPELFQTARM SASSLRYYGIGLQNGNYTVALQFADFDFEDSQTWQSVGRRIFDIYLQGERKEKNFDIMKA AGGKSYTAVEKQYIVPVTRNFLEIHLFWAGKGTCCIPFRGYYGPAISAFSVTPNFNPTVQ TSRKTGIIVGVVVGAAVLGVLALAGLCMRRQKRRKLLLEQQELYSIVGRPNVFTYGELRT STENFSSNNLLGEGGYGSVYKGKLAEGRVVAVKQLSETSHQGKQQFAAEIGTISRVQHRN LVKLYGCCLEGNKPLLVYEYLENGSLDKALFGSGRLNLDWPTRFEICLGIARGIAYLHEE SSIRIVHRDIKASNILLDANFNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMRG HMTEKVDVFAFGMVILETLAGRPNFDNMLDEIKVYILEWVWQLYEDKHPLDMVDPKLEEF NSGEVIRAIHVALLCTQGSPHQRPSMSRAVSMLAGDVEVGEVVNKPSYITEWQIKGGNTS SFMSNNVSGQSSMAPRSSASHTSSPFLNSVIEEGW

Transcript Sequence

Transcript ID	Zm00001d002312_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:10104632:10109656:1 gene:Zm00001d002312 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat transmembrane protein kinase
Sequence	GTATTGGGTAATTCAACCACCAAAATTATTTAGGAAAAGGTTTGACCCTATTTCCCTTTC AGTTAGTTAGCAAGGAGCGAATGAAACTCGGTATCAGGGACGACACCGTCAAAGAGGCAA TAGTGGTGAGGGCAAGTAGATCGGGTAGCATCCGGAAGCCGGCCTTGGCACGTGTGACCA TCGGGTAATGACATCAGCGACGATACAACGATATCCCTGGCTGGTCGGCGCACCGGTGTC GCTAGTGCAGGAGCCAGGGGTGCTGAAGTTGTGGCCAGCGTGGGTGACGAATACAGACGA TCGGTGAGGATAGCTACATGTCGGCCGCCGGTGCCACACGTGGTGCAGTAGGAAGCGCTG GTGTTGCGCACGAAGGGATAGGGGGTGCTGATGCCATGCACGGTTCGGCTGGCACAGGAG CTGCGCAGGGCGCAGCAGGAGTCGGCGGCACCGCACGGGGCAGAAATCTAGAAGGGACCG TAGGTGCGGGCAGGGGCGTGGTAGGAGGCTCGAACCCGAGGGGTACCCCCTTTGTGGACA AGGAGCCGACATGGTGGTAGTGTCTGCAAGAGGGGTTCCAATGGTGGAAACTGAGGAACT TGACTCACATAAAAAAATCTAGGTTAATTACAATGAATGAGGCAGCGAGTGGGAATCTGT CCTCATCAAAACCCACATGACGAGATATGAGCATGCGGTTGGAAGATAGGTCAAGACACT GGTAGCCTTTGTGATCGGAGAGTAGCTGAGAAAGACACCAAATAGATCGAGGAGCAAGCT TGTGCGGAGCAATAGCGGCAGTGTTAGGGTAACACGCACAACCAAAAACTCACAGGTGGT CGAATGAAGGTGCTGAACCAAATGTAGCTACATGAGGACAGACAACGTTGATCGTCTTTG TGAGGAGACCGTTAAGCAGGTAAGTGGCAGTGTGGAGCTTCTTATCCCGATATCGTCTAT GAAGGGATGCCTGGATCAACAATGAGCGAACAACATTGTTAATGGAACGAACAATATGCT CGACTTTACTGTTTTGAGGGGTCGTGTAAGGGCAGAACATCCGCAGCTGAGTGCCTTTGG AGAGCAGAAAAGTTTGGGTAGAAGAATTATCTAATTCACGCTCGTTGTCGCATTGGATCG CCTTGATAGTGCAACTAAACTGAGTAACAGTGATGCCTTCTAATTATATTTCCTGTGTTT CATTCTACATAGGGACTTGGTGGCGAACAATTTTGCGACGAATAGCGGACCTTGGGGGCT GCCGTGTCTTCAGAGAGACACACCCTGTTTCCTTGGCTCTCCACAATCTGCCTCTCTTGC TGTGGACTGTGGGAGCAGTAGATCTATATCTGGCTCTGATAAGTCCATGTATCAACGTGA TGATGCCAATCTTGGAGCTGCATCCTATTATGTTACAGGAGCACAGACATGGGGTGTTAG CAATGTGGGCAAGTTCACGGAGGCAGTATACGAAAGTTACATAATCTCCAGCTCACGCCA ATTCTACAATACTCTAGATCCAGAACTATTCCAGACAGCAAGGATGTCGGCATCATCTTT GAGATACTATGGTATTGGACTCCAGAACGGAAATTATACCGTCGCACTTCAATTTGCAGA TTTTGACTTTGAAGATTCACAGACTTGGCAGAGTGTTGGGAGAAGGATTTTTGATATCTA TCTCCAGGGTGAGCGTAAGGAGAAGAACTTTGACATAATGAAGGCAGCAGGGGGAAAATC TTACACTGCTGTTGAGAAGCAGTATATTGTTCCTGTCACTAGAAACTTCCTTGAGATTCA TCTTTTCTGGGCCGGCAAGGGCACTTGTTGCATTCCCTTTCGAGGCTACTATGGGCCTGC AATCTCAGCTTTCAGTGTAACGCCAAATTTTAACCCTACAGTGCAGACCAGTAGGAAAAC AGGTATAATTGTTGGAGTCGTGGTTGGTGCAGCAGTTTTGGGAGTACTAGCACTTGCTGG ACTCTGTATGAGGAGGCAGAAAAGGAGAAAATTATTATTGGAGCAACAGGAACTTTACAG TATTGTTGGAAGACCTAATGTATTCACTTATGGTGAACTAAGGACGTCTACTGAAAATTT TAGTTCCAATAACCTTCTGGGTGAAGGAGGATATGGGTCAGTTTATAAGGGTAAATTAGC TGAAGGAAGGGTGGTGGCTGTAAAACAGTTATCTGAAACATCTCATCAAGGAAAACAACA ATTTGCTGCCGAAATAGGAACTATTTCTCGAGTGCAACACCGTAATCTTGTGAAGTTGTA CGGTTGCTGCCTTGAGGGAAATAAACCACTGTTGGTTTATGAGTATCTGGAGAATGGAAG CCTTGATAAAGCATTATTTGGAAGTGGGAGACTGAACCTAGACTGGCCAACACGCTTTGA GATATGTTTGGGCATTGCAAGAGGCATCGCTTATCTCCATGAAGAGTCTAGCATCCGTAT TGTGCATAGGGACATAAAGGCTAGCAATATCTTGCTTGACGCAAATTTCAACCCTAAGAT CTCAGATTTTGGGCTCGCCAAACTTTATGACGACAAGAAGACTCATGTCAGCACAAAAGT TGCGGGTACATTTGGTTATCTTGCACCTGAGTACGCCATGAGAGGTCATATGACCGAGAA AGTTGATGTGTTTGCATTTGGCATGGTCATATTGGAGACCTTAGCCGGAAGACCAAATTT TGACAATATGCTAGATGAAATTAAGGTTTATATATTAGAATGGGTCTGGCAACTGTACGA AGATAAGCACCCTCTGGACATGGTCGACCCCAAGCTCGAAGAATTCAACAGTGGCGAGGT GATCCGTGCCATCCACGTGGCCCTCCTCTGCACCCAGGGCTCGCCACACCAGCGTCCTTC CATGTCACGAGCGGTGTCGATGCTGGCGGGAGACGTGGAGGTGGGCGAGGTGGTGAACAA ACCCAGTTACATCACGGAGTGGCAGATCAAGGGTGGCAACACCAGCAGCTTCATGAGCAA CAATGTCAGTGGACAGTCGAGCATGGCACCAAGGTCGTCAGCCTCGCACACCTCGTCGCC GTTCTTGAACTCTGTCATCGAAGAAGGCTGGTGATTATTACCAAGTTCTGTCAAGCGAAC GGACTGCTGCTTATAAATGCACGCTACAGAATGCTCTCTGGTCTCTGCCTCTGCACATAT GCTGTGTAGGTTCTATGTTCCATTTTTTATACAAATGATAGATATATTGATTGCTAGGTC CATTTGCAAGAACTAAGGTGGTGTTTGTTTAAGGTTATAATTTGTCAATATTATATAATC CAACAACTTTTAAACTAAAGATTAGTTCAAAAGTTGTTGAATTATATAATCTAGACAGAT TATAATCTAAAACAAACACCCCTAAGTCACGTTAGATATATAATTTTCCGCTATATCAAA CAGATCCTTACGTTGTCTCCATTGGCTTTCTATTTTCTATTCCATCTTCTAATTCAAACT TCACTTTATGC