Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002266_T027
CDS Infomation

cds chromosome:B73_RefGen_v4:2:9171105:9172420:1 gene:Zm00001d002266 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific histone demethylase 1

Sequence

ATGGTTCGTGGGTATCGTCCGGTTATAAATACTCTCGCAAAAGGCTTAGATATACGCCTC
AACCATAAGGTTGTGGAAATTGTTCGCCATAGGAACAGGGTAGAGGTTACCGTAAGCAGC
GGCCAAACGTTTGTTGCGGATGCTGCTGTGGTCACTGTTCCGTTGGGTGTCCTGAAAGCG
AAAACCATTAAATTCGAGCCGAGGCTGCCAGAGTGGAAAGAGGAAGCGATCAGAGAACTT
ACGGTTGGAGTTGAGAACAAGATCGTTCTTCACTTCGGGCAGGTTTTCTGGCCTAACGTG
GAGTTCCTCGGCGTCGTTTCCTCTAGCACCTACGGTTGCAGCTATTTCCTCAACCTTCAC
AAGGCAACAGGCCACCCAGTCCTTGTCTACATGCCCGCCGGCCGCCTTGCTCGTGACATC
GAGAAGACGTCGGACGAGGCTGCTGCCCAGTTCGCCTTTTCTCAGCTGAAGAAGATCCTT
CCCAATGCAGCTGAGCCGATAAACTACCTGGTGTCGCGCTGGGGCTCGGACGAGAACACG
CTTGGTTCGTACACGTTCGATGGGGTGAACAAACCCCGTGACCTGTACGAGAAGCTGCGC
ATCCCCGTGGACAACCTGTTCTTCGCGGGAGAGGCCACGAGCGTCAAGTACACGGGCACG
GTGCACGGCGCCTTCTCCACGGGTGTCATGGCGGCCGAGGAGTGCAAGATGCGGGTTCTG
GAGCGGTTCAGGGAGCTCGACATGCTGGAGATGTGCCACCCTGCCATGGGCGAGGACAGC
CCTGTGTCTGTCCCGCTGCTCATCTCTCGGCTCTAA

Peptide Sequence

PEP ID

Zm00001d002266_P027
PEP Infomation

pep chromosome:B73_RefGen_v4:2:9171105:9172420:1 gene:Zm00001d002266 transcript:Zm00001d002266_T027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific histone demethylase 1

Sequence

MVRGYRPVINTLAKGLDIRLNHKVVEIVRHRNRVEVTVSSGQTFVADAAVVTVPLGVLKA
KTIKFEPRLPEWKEEAIRELTVGVENKIVLHFGQVFWPNVEFLGVVSSSTYGCSYFLNLH
KATGHPVLVYMPAGRLARDIEKTSDEAAAQFAFSQLKKILPNAAEPINYLVSRWGSDENT
LGSYTFDGVNKPRDLYEKLRIPVDNLFFAGEATSVKYTGTVHGAFSTGVMAAEECKMRVL
ERFRELDMLEMCHPAMGEDSPVSVPLLISRL

Transcript Sequence

Transcript ID

Zm00001d002266_T027
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:9171105:9172420:1 gene:Zm00001d002266 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific histone demethylase 1

Sequence

GGAGGTGCTGCTTCCAGGTGGCCATGGCCTCATGGTTCGTGGGTATCGTCCGGTTATAAA
TACTCTCGCAAAAGGCTTAGATATACGCCTCAACCATAAGGTTGTGGAAATTGTTCGCCA
TAGGAACAGGGTAGAGGTTACCGTAAGCAGCGGCCAAACGTTTGTTGCGGATGCTGCTGT
GGTCACTGTTCCGTTGGGTGTCCTGAAAGCGAAAACCATTAAATTCGAGCCGAGGCTGCC
AGAGTGGAAAGAGGAAGCGATCAGAGAACTTACGGTTGGAGTTGAGAACAAGATCGTTCT
TCACTTCGGGCAGGTTTTCTGGCCTAACGTGGAGTTCCTCGGCGTCGTTTCCTCTAGCAC
CTACGGTTGCAGCTATTTCCTCAACCTTCACAAGGCAACAGGCCACCCAGTCCTTGTCTA
CATGCCCGCCGGCCGCCTTGCTCGTGACATCGAGAAGACGTCGGACGAGGCTGCTGCCCA
GTTCGCCTTTTCTCAGCTGAAGAAGATCCTTCCCAATGCAGCTGAGCCGATAAACTACCT
GGTGTCGCGCTGGGGCTCGGACGAGAACACGCTTGGTTCGTACACGTTCGATGGGGTGAA
CAAACCCCGTGACCTGTACGAGAAGCTGCGCATCCCCGTGGACAACCTGTTCTTCGCGGG
AGAGGCCACGAGCGTCAAGTACACGGGCACGGTGCACGGCGCCTTCTCCACGGGTGTCAT
GGCGGCCGAGGAGTGCAAGATGCGGGTTCTGGAGCGGTTCAGGGAGCTCGACATGCTGGA
GATGTGCCACCCTGCCATGGGCGAGGACAGCCCTGTGTCTGTCCCGCTGCTCATCTCTCG
GCTCTAAAAGCAGACGAGTAGTAGTTGTGTATGGGATGGATCGGCACCTGAGAGTAGGCT
GGGACATCCCACTGATTGCCGGAGGGAAGCAGGGAGGAAGAAGCTCCCCTCGCTTCGCTT
CTCCTCGGCATGAGGCATGTGCCTGGCGTTACTTGTGGCGTGCCAAGTGCCATATTTCCC
TAAACTTATTCTGCGTGGGAACCCTCTATTATGTATGTATACTGTGAATTTGTGACTGTT
CAGGTAACACGAGTTATCGTGACATCTT