Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002169_T023
CDS Infomation

cds chromosome:B73_RefGen_v4:2:7096219:7100099:1 gene:Zm00001d002169 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence

ATGGCATCCCGTTTCTGGGGACAGGGGGACAGTGAGTCTGAGGAGGAGGAGGTGGAAGAA
GTTGAGTCAGAACAGGGCAGTGATAGTGATGATGATGGAGGTCGAGGTGGTGCGGGACGC
GGTGCCCAAAACCGATACTTGAAGAATCAAGAAGATGACAGCGATGAGTCTGATACAGGT
CACCGTGTGATCCGCTCCCTGAGGGACAAGCGCAACGAGGAGATGAGATCTATTGTTGAT
CAGATGCGTAATGCAATGAAGATCAATGACTGGGTGAGCTTGCAGGAGAGTTTTGAGAAG
CTTAACAAACATCTTGAGAAGGTTGTTCGTGTCAATGAATCTACTGAGGTACCAAAAATG
TATATCAAAGCTCTTGTGTTGCTGGAGGACTTCCTTGCTGAAGCCCTTGCAAACAAGGAG
GCCAAGAAGAAGATGAGCAGCAGCAATTCGAAGGCATTCAATGCGATGAGGCAAAAACTC
AAGAAGAACAACAAGCAGTATGAAGAGCAGATCCAGAAGTGCAGGGAGCATCCAGAGAGT
TTTGAAGATGAAGCTGCAGATGATAAAGATACGGATGATGACGATGTTGATGAAAGTGAT
GCAGAGATTGAAGATCCTGATAAAATAGCTATGTCAGAATCAGAAGAGGAACAAGATGAA
GAGGATGATGACAAGGATGGTTGGGAACAGAAAAGGAGTAAGAAGGATAAGCTGATGGAT
AAGCAGTTCTTGAAAGATCCAAGTGAAATCACATGGGATATTGTCGATAAGAAACTCAAA
GAGATTGTAGCATCTAGGGGAAAGAAAGGTACTGGAAGGATCGAGCGTGTTGAGCAGTTA
ACATTTTTGACCCGTGTGGCCAAAACACCAGCTCAGAAGCTTGAAATCCTCTTCCATGTG
ATTTCTGCGCAGTTTGATGTTAACCCTAGTCTACTTGGGCATATGCCAGTCAATGTGTGG
AAGAAGTGTGTCAATAATATGCTTCTTGTGCTTGATATACTCCAGCAGTATCCTAACATT
GTAGTAGACACCTCGTTTGAGCCTGATGAGAATGAAACTCAAAAGGGTGCAGACTACAAT
GGAACAATACATGTTGTGGGTGACCTGGTTGCATTCCTTGAGAGACTGGACTCTGAATTT
TTGAAGACCTTACAGTGCACAGATCCGTACACAAAAGATTATGTTCAGAGGCTCAGAGAG
GAACCCCTGTTTCTGGTTGTCGCACAGAACGTCCAAGATTATCTTGAAAGGGTTGGAAAC
TTCAAAGCTGCTGCCAAGGTTGCACTGCGCCGTGTTGAACTAGTTTACTACAAGCCCCAA
GAAGTGTACGATGCAATGAGAAAACTCGCAGAGCAGCCTGAGGACTGTGTGGACGATGAT
GATGCAGAGGCTGGTGATGAACATAAAGCAGTAGATGACAATAGAGGACCATCACCATTT
GTTGTGATTCCAGAGGCTGTGCACAGGAAGCCTACTTTTCCAGAGAGCGGTAGAACTTTG
ATGGATGGATTGATGTTCTTAATCTACAAGTATGGAGATGAAAGGACCAAAGCCCGTGCA
ATGCTGTGTGACATATATCACCATGCGATCTCTGATGAGTTTTCAGTGGCTCGCGACTTG
CTTTTAATGAGTCATTTGCAAGATGGTATTCAGCTCATGGACATATCATCGCAGATTTTA
TTCAATAGAGTCATGGCCCAGTTAGGGCTGTGTGCTTTCAGGGCTGGTTTGATAAATGAA
GCCCATGGTTGCTTGACTGAGCTCTATTCTACTGGGAGGGTGAAAGAATTGCTTGCACAA
GGTGTGCAACAAAGCCGATACCATGAAAAAACTCCCGAACAGGAAAGACTTGAGAGGAGA
AGACAAATGCCTTACCATATGCATATAAACCTGGAGCTTTTGGAAGCCACACACTTGATC
TGTGCGATGCTGATTGAAGTCCCCAATATGGCTGCCAGCACCTATGACAAGCGGAGACCT
ATGAGCAAAACATTCCGAAGGCTTCTTGAAGTGAGTGAAAGGCAGACATTTGTTGGGCCG
CCCGAGAATGTGAGGGACCATGTAATGGCTGCCACAAGAGCCCTCAACAAGGGTGATCAC
CAAAAGGCTTTCAGTGTCATAAATTCGTTGGAGATTTGGAAGCTTTTGAGGAACAGAGAG
CATGTCCTTGAGATGTTGAAGCTTAAGATCAAGGAGGAAGCTCTTAGAACCTATCTCTTT
TCATACTCGTCTTCGTACGAGTCCTTAAGCCTTAACCAGCTCACTACCATGTTTGATCTC
AGCGAGCAGCATGCCCACAGCATTGTTAGCAAGATGATGATGCATGAAGAGCTTCATGCT
AGCTGGGACCAGCCAACAAAGTGCATCGTATTCCATAGTGTGGACCAAACTAGGCTTCAG
GGGCTACTCTTCCAGATGGCAGATAAGCTCTCGGTCCTGGTGGAGATCAATGAGAGGGCA
TACGAGGCAAGAACTGGTGGTGCTCTCGAGGGGGTACCGCCCAGGCGCAGGGGCGAGGGT
CAGGATAATATGGGAAAGTGGCAGGATAACTTTGTCTCGTCACAGGGGCGGCAGGGTGGT
GGCAACAGGTTTGGATACTCCAGCAGAGGTGCAGTATCTGGTCAAAGTGGTGGTGGACAC
CAGAGGGACAGGGGCAATCAGGGTTACCGCGGGGGCTATGGTGGCGTTTCAAGGTTTCAG
GATGCAAGTGCACGCATGGTGAACCTGAACAGGGTTGGTAGAGTTTAG

Peptide Sequence

PEP ID

Zm00001d002169_P023
PEP Infomation

pep chromosome:B73_RefGen_v4:2:7096219:7100099:1 gene:Zm00001d002169 transcript:Zm00001d002169_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence

MASRFWGQGDSESEEEEVEEVESEQGSDSDDDGGRGGAGRGAQNRYLKNQEDDSDESDTG
HRVIRSLRDKRNEEMRSIVDQMRNAMKINDWVSLQESFEKLNKHLEKVVRVNESTEVPKM
YIKALVLLEDFLAEALANKEAKKKMSSSNSKAFNAMRQKLKKNNKQYEEQIQKCREHPES
FEDEAADDKDTDDDDVDESDAEIEDPDKIAMSESEEEQDEEDDDKDGWEQKRSKKDKLMD
KQFLKDPSEITWDIVDKKLKEIVASRGKKGTGRIERVEQLTFLTRVAKTPAQKLEILFHV
ISAQFDVNPSLLGHMPVNVWKKCVNNMLLVLDILQQYPNIVVDTSFEPDENETQKGADYN
GTIHVVGDLVAFLERLDSEFLKTLQCTDPYTKDYVQRLREEPLFLVVAQNVQDYLERVGN
FKAAAKVALRRVELVYYKPQEVYDAMRKLAEQPEDCVDDDDAEAGDEHKAVDDNRGPSPF
VVIPEAVHRKPTFPESGRTLMDGLMFLIYKYGDERTKARAMLCDIYHHAISDEFSVARDL
LLMSHLQDGIQLMDISSQILFNRVMAQLGLCAFRAGLINEAHGCLTELYSTGRVKELLAQ
GVQQSRYHEKTPEQERLERRRQMPYHMHINLELLEATHLICAMLIEVPNMAASTYDKRRP
MSKTFRRLLEVSERQTFVGPPENVRDHVMAATRALNKGDHQKAFSVINSLEIWKLLRNRE
HVLEMLKLKIKEEALRTYLFSYSSSYESLSLNQLTTMFDLSEQHAHSIVSKMMMHEELHA
SWDQPTKCIVFHSVDQTRLQGLLFQMADKLSVLVEINERAYEARTGGALEGVPPRRRGEG
QDNMGKWQDNFVSSQGRQGGGNRFGYSSRGAVSGQSGGGHQRDRGNQGYRGGYGGVSRFQ
DASARMVNLNRVGRV

Transcript Sequence

Transcript ID

Zm00001d002169_T023
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:7096219:7100099:1 gene:Zm00001d002169 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence

CAGAGCAAGCCTTCTAGAAGTTAAGGAAGCAGCAGAACCATGGCATCCCGTTTCTGGGGA
CAGGGGGACAGTGAGTCTGAGGAGGAGGAGGTGGAAGAAGTTGAGTCAGAACAGGGCAGT
GATAGTGATGATGATGGAGGTCGAGGTGGTGCGGGACGCGGTGCCCAAAACCGATACTTG
AAGAATCAAGAAGATGACAGCGATGAGTCTGATACAGGTCACCGTGTGATCCGCTCCCTG
AGGGACAAGCGCAACGAGGAGATGAGATCTATTGTTGATCAGATGCGTAATGCAATGAAG
ATCAATGACTGGGTGAGCTTGCAGGAGAGTTTTGAGAAGCTTAACAAACATCTTGAGAAG
GTTGTTCGTGTCAATGAATCTACTGAGGTACCAAAAATGTATATCAAAGCTCTTGTGTTG
CTGGAGGACTTCCTTGCTGAAGCCCTTGCAAACAAGGAGGCCAAGAAGAAGATGAGCAGC
AGCAATTCGAAGGCATTCAATGCGATGAGGCAAAAACTCAAGAAGAACAACAAGCAGTAT
GAAGAGCAGATCCAGAAGTGCAGGGAGCATCCAGAGAGTTTTGAAGATGAAGCTGCAGAT
GATAAAGATACGGATGATGACGATGTTGATGAAAGTGATGCAGAGATTGAAGATCCTGAT
AAAATAGCTATGTCAGAATCAGAAGAGGAACAAGATGAAGAGGATGATGACAAGGATGGT
TGGGAACAGAAAAGGAGTAAGAAGGATAAGCTGATGGATAAGCAGTTCTTGAAAGATCCA
AGTGAAATCACATGGGATATTGTCGATAAGAAACTCAAAGAGATTGTAGCATCTAGGGGA
AAGAAAGGTACTGGAAGGATCGAGCGTGTTGAGCAGTTAACATTTTTGACCCGTGTGGCC
AAAACACCAGCTCAGAAGCTTGAAATCCTCTTCCATGTGATTTCTGCGCAGTTTGATGTT
AACCCTAGTCTACTTGGGCATATGCCAGTCAATGTGTGGAAGAAGTGTGTCAATAATATG
CTTCTTGTGCTTGATATACTCCAGCAGTATCCTAACATTGTAGTAGACACCTCGTTTGAG
CCTGATGAGAATGAAACTCAAAAGGGTGCAGACTACAATGGAACAATACATGTTGTGGGT
GACCTGGTTGCATTCCTTGAGAGACTGGACTCTGAATTTTTGAAGACCTTACAGTGCACA
GATCCGTACACAAAAGATTATGTTCAGAGGCTCAGAGAGGAACCCCTGTTTCTGGTTGTC
GCACAGAACGTCCAAGATTATCTTGAAAGGGTTGGAAACTTCAAAGCTGCTGCCAAGGTT
GCACTGCGCCGTGTTGAACTAGTTTACTACAAGCCCCAAGAAGTGTACGATGCAATGAGA
AAACTCGCAGAGCAGCCTGAGGACTGTGTGGACGATGATGATGCAGAGGCTGGTGATGAA
CATAAAGCAGTAGATGACAATAGAGGACCATCACCATTTGTTGTGATTCCAGAGGCTGTG
CACAGGAAGCCTACTTTTCCAGAGAGCGGTAGAACTTTGATGGATGGATTGATGTTCTTA
ATCTACAAGTATGGAGATGAAAGGACCAAAGCCCGTGCAATGCTGTGTGACATATATCAC
CATGCGATCTCTGATGAGTTTTCAGTGGCTCGCGACTTGCTTTTAATGAGTCATTTGCAA
GATGGTATTCAGCTCATGGACATATCATCGCAGATTTTATTCAATAGAGTCATGGCCCAG
TTAGGGCTGTGTGCTTTCAGGGCTGGTTTGATAAATGAAGCCCATGGTTGCTTGACTGAG
CTCTATTCTACTGGGAGGGTGAAAGAATTGCTTGCACAAGGTGTGCAACAAAGCCGATAC
CATGAAAAAACTCCCGAACAGGAAAGACTTGAGAGGAGAAGACAAATGCCTTACCATATG
CATATAAACCTGGAGCTTTTGGAAGCCACACACTTGATCTGTGCGATGCTGATTGAAGTC
CCCAATATGGCTGCCAGCACCTATGACAAGCGGAGACCTATGAGCAAAACATTCCGAAGG
CTTCTTGAAGTGAGTGAAAGGCAGACATTTGTTGGGCCGCCCGAGAATGTGAGGGACCAT
GTAATGGCTGCCACAAGAGCCCTCAACAAGGGTGATCACCAAAAGGCTTTCAGTGTCATA
AATTCGTTGGAGATTTGGAAGCTTTTGAGGAACAGAGAGCATGTCCTTGAGATGTTGAAG
CTTAAGATCAAGGAGGAAGCTCTTAGAACCTATCTCTTTTCATACTCGTCTTCGTACGAG
TCCTTAAGCCTTAACCAGCTCACTACCATGTTTGATCTCAGCGAGCAGCATGCCCACAGC
ATTGTTAGCAAGATGATGATGCATGAAGAGCTTCATGCTAGCTGGGACCAGCCAACAAAG
TGCATCGTATTCCATAGTGTGGACCAAACTAGGCTTCAGGGGCTACTCTTCCAGATGGCA
GATAAGCTCTCGGTCCTGGTGGAGATCAATGAGAGGGCATACGAGGCAAGAACTGGTGGT
GCTCTCGAGGGGGTACCGCCCAGGCGCAGGGGCGAGGGTCAGGATAATATGGGAAAGTGG
CAGGATAACTTTGTCTCGTCACAGGGGCGGCAGGGTGGTGGCAACAGGTTTGGATACTCC
AGCAGAGGTGCAGTATCTGGTCAAAGTGGTGGTGGACACCAGAGGGACAGGGGCAATCAG
GGTTACCGCGGGGGCTATGGTGGCGTTTCAAGGTTTCAGGATGCAAGTGCACGCATGGTG
AACCTGAACAGGGTTGGTAGAGTTTAGAAGTGATAATTTTCAGCTCAAGTAATCCTGAAA
TTCTCCTAAAAGCCAAGTTCTGAATCACTGCATTTTACATAGTTTCCTGTT