Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002166_T044
CDS Infomation	cds chromosome:B73_RefGen_v4:2:7062111:7066121:1 gene:Zm00001d002166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence	ATGGCATCCCGTTTCTGGGGACAGGGGGACAGTGAGTCTGAGGAGGAGGAGGTGGAAGAA GTTGAGTCAGAACAGGGCAGTGATAGTGATGATGATGGAGGTCGAGGTGGTGCGGGACGC GGTGCCCAAAACCGATATTTGAAGAATCAAGAAGATGACAGCGATGAGTCTGATACAGGT CACCGTGTGATCCGCTCCCTGAGGGACAAGCGCAACGAGGAGATGAGATCTATTGTTGAT CAGATGCGTAATGCAATGAAGATCAATGACTGGGTGAGCTTGCAGGAGAGTTTTGAGAAG CTTAACAAACATCTTGAGAAGGTTGTTCGTGTCAATGAATCTACTGAGGTACCAAAAATG TATATCAAAGCTCTTGTGTTGCTGGAGGACTTCCTTGCCGAAGCCCTTGCAAACAAGGAG GCCAGGAAGAAGATGAGCAGCAGCAATTCGAAGGCACTCAATGCGATGAGGCAAAAACTC AAGAAGAACAACAAGCAGTATGAAGAGCAGATCCAGAAGTGCAGGGAGCATCCAGAGAGT TTTGAAGATGAAGCTGCAGATGATAAAGATGTGGATGATGACGATGCTGATGAAAGTGAT GCAGAGATTGAAGATCCTGATAAAATAGCTATGTCAGAATCAGAAGAGGAACAAGATGAA GAGGATGATGATAAGGATGGTTGGGAACAGAAAAGGAGTAAGAAGGATAAGCTGATGGAT AAGCAGTTCTTGAAAGATCCAAGTGAAATCACATGGGATATTGTCGATAAGAAACTCAAA GAGATTATAGCATCTAGGGGAAAGAAAGGTACTGGAAGGATCGAGCGTGTTGAGCAGTTA ACATTTTTGACCCGTGTGGCCAAAACACCAGCTCAGAAGCTTGAAATCCTCTTCCATGTG ATTTCTGCGCAGTTTGATGTTAACCCTAGTCTACTTGGGCATATGCCAGTCAATGTGTGG AAGAAGTGTGTCAATAATATGCTTCTTGTGCTTGATATACTCCAGCAGTATCCTAACATT GTAGTAGACACCTCATTTGAGCCTGATGAGAATGAAACTCAAAAGGGTGCAGACTACAAT GGAACAATACATGTTGTCGGTGACCTGGTTGCATTCCTTGAGAGACTGGACTCTGAATTT TTGAAGACCTTACAGTGCACAGATCCATACACAAAAGATTATGTTCAGAGGCTCAGAGAG GAACCCCTGTTTCTGGTTGTCGCACAGAACGTCCAAGATTATCTTGAAAGGGTTGGAAAC TTCAAAGCTGCTGCCAAGGTTGCACTGCGCCGTGTTGAACTAGTTTACTACAAGCCCCAA GAAGTGTACGATGCAATGAGAAAACTCGCAGAGCAGCCTGAGGACTGTGTGGATGATGAT GATGCAGAGGCTGGTGATGAACATAAAGCAGTAGATGACAATAGAGGACCATCACCATTT GTTGTGATTCCAGAGGCTGTGCACAGGAAGCCTACTTTTCCAGAAAGCGGTAGAACTTTG ATGGATGGATTGATGTTCTTAATTTACAAGTATGGGGATGAAAGGACCAAAGCCCGTGCA ATGCTGTGTGACATATATCACCATGCGATCTCTGATGAGTTTTCAGTGGCTCGCGACTTG CTTTTAATGAGTCATTTGCAAGATGGTATTCAGCTCATGGACATATCATCGCAGATTTTA TTCAACAGAGTCATGGCCCAGTTAGGGCTGTGTGCTTTCAGGGCTGGTTTGATAAATGAA GCCCATGGTTGCTTGACTGAGCTCTATTCTACTGGGAGGGTGAAAGAATTGCTTGCACAA GGTGTGCAACAAAGCCGATACCATGAAAAAACTCCCGAACAGGTAAAATAA

Peptide Sequence

PEP ID	Zm00001d002166_P044
PEP Infomation	pep chromosome:B73_RefGen_v4:2:7062111:7066121:1 gene:Zm00001d002166 transcript:Zm00001d002166_T044 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence	MASRFWGQGDSESEEEEVEEVESEQGSDSDDDGGRGGAGRGAQNRYLKNQEDDSDESDTG HRVIRSLRDKRNEEMRSIVDQMRNAMKINDWVSLQESFEKLNKHLEKVVRVNESTEVPKM YIKALVLLEDFLAEALANKEARKKMSSSNSKALNAMRQKLKKNNKQYEEQIQKCREHPES FEDEAADDKDVDDDDADESDAEIEDPDKIAMSESEEEQDEEDDDKDGWEQKRSKKDKLMD KQFLKDPSEITWDIVDKKLKEIIASRGKKGTGRIERVEQLTFLTRVAKTPAQKLEILFHV ISAQFDVNPSLLGHMPVNVWKKCVNNMLLVLDILQQYPNIVVDTSFEPDENETQKGADYN GTIHVVGDLVAFLERLDSEFLKTLQCTDPYTKDYVQRLREEPLFLVVAQNVQDYLERVGN FKAAAKVALRRVELVYYKPQEVYDAMRKLAEQPEDCVDDDDAEAGDEHKAVDDNRGPSPF VVIPEAVHRKPTFPESGRTLMDGLMFLIYKYGDERTKARAMLCDIYHHAISDEFSVARDL LLMSHLQDGIQLMDISSQILFNRVMAQLGLCAFRAGLINEAHGCLTELYSTGRVKELLAQ GVQQSRYHEKTPEQVK

Transcript Sequence

Transcript ID	Zm00001d002166_T044
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:7062111:7066121:1 gene:Zm00001d002166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C
Sequence	GAAGTTAAGGAAGCAGCAGAACCATGGCATCCCGTTTCTGGGGACAGGGGGACAGTGAGT CTGAGGAGGAGGAGGTGGAAGAAGTTGAGTCAGAACAGGGCAGTGATAGTGATGATGATG GAGGTCGAGGTGGTGCGGGACGCGGTGCCCAAAACCGATATTTGAAGAATCAAGAAGATG ACAGCGATGAGTCTGATACAGGTCACCGTGTGATCCGCTCCCTGAGGGACAAGCGCAACG AGGAGATGAGATCTATTGTTGATCAGATGCGTAATGCAATGAAGATCAATGACTGGGTGA GCTTGCAGGAGAGTTTTGAGAAGCTTAACAAACATCTTGAGAAGGTTGTTCGTGTCAATG AATCTACTGAGGTACCAAAAATGTATATCAAAGCTCTTGTGTTGCTGGAGGACTTCCTTG CCGAAGCCCTTGCAAACAAGGAGGCCAGGAAGAAGATGAGCAGCAGCAATTCGAAGGCAC TCAATGCGATGAGGCAAAAACTCAAGAAGAACAACAAGCAGTATGAAGAGCAGATCCAGA AGTGCAGGGAGCATCCAGAGAGTTTTGAAGATGAAGCTGCAGATGATAAAGATGTGGATG ATGACGATGCTGATGAAAGTGATGCAGAGATTGAAGATCCTGATAAAATAGCTATGTCAG AATCAGAAGAGGAACAAGATGAAGAGGATGATGATAAGGATGGTTGGGAACAGAAAAGGA GTAAGAAGGATAAGCTGATGGATAAGCAGTTCTTGAAAGATCCAAGTGAAATCACATGGG ATATTGTCGATAAGAAACTCAAAGAGATTATAGCATCTAGGGGAAAGAAAGGTACTGGAA GGATCGAGCGTGTTGAGCAGTTAACATTTTTGACCCGTGTGGCCAAAACACCAGCTCAGA AGCTTGAAATCCTCTTCCATGTGATTTCTGCGCAGTTTGATGTTAACCCTAGTCTACTTG GGCATATGCCAGTCAATGTGTGGAAGAAGTGTGTCAATAATATGCTTCTTGTGCTTGATA TACTCCAGCAGTATCCTAACATTGTAGTAGACACCTCATTTGAGCCTGATGAGAATGAAA CTCAAAAGGGTGCAGACTACAATGGAACAATACATGTTGTCGGTGACCTGGTTGCATTCC TTGAGAGACTGGACTCTGAATTTTTGAAGACCTTACAGTGCACAGATCCATACACAAAAG ATTATGTTCAGAGGCTCAGAGAGGAACCCCTGTTTCTGGTTGTCGCACAGAACGTCCAAG ATTATCTTGAAAGGGTTGGAAACTTCAAAGCTGCTGCCAAGGTTGCACTGCGCCGTGTTG AACTAGTTTACTACAAGCCCCAAGAAGTGTACGATGCAATGAGAAAACTCGCAGAGCAGC CTGAGGACTGTGTGGATGATGATGATGCAGAGGCTGGTGATGAACATAAAGCAGTAGATG ACAATAGAGGACCATCACCATTTGTTGTGATTCCAGAGGCTGTGCACAGGAAGCCTACTT TTCCAGAAAGCGGTAGAACTTTGATGGATGGATTGATGTTCTTAATTTACAAGTATGGGG ATGAAAGGACCAAAGCCCGTGCAATGCTGTGTGACATATATCACCATGCGATCTCTGATG AGTTTTCAGTGGCTCGCGACTTGCTTTTAATGAGTCATTTGCAAGATGGTATTCAGCTCA TGGACATATCATCGCAGATTTTATTCAACAGAGTCATGGCCCAGTTAGGGCTGTGTGCTT TCAGGGCTGGTTTGATAAATGAAGCCCATGGTTGCTTGACTGAGCTCTATTCTACTGGGA GGGTGAAAGAATTGCTTGCACAAGGTGTGCAACAAAGCCGATACCATGAAAAAACTCCCG AACAGGTAAAATAAAACCCCTATGTTTTTCTTGTAAATGCTATTCACATAGCCCTTAACC CTAATCACACAAGCAAGACCCTAGTTTGAAAATTTAATGTGAAATTGATAATATTCACAC AGTAATATCTCCTGCTTGCATCTGTTAATTATTTATGTTTCTGTTGCTTTTTGAATATGA TATATAACGCTTTATCCTGTTGTATGCAGTAATTCTGACCCAAATCACAAATCTTGACTT TTTTGTATATTGAGCTGTATTTATTTTCTTTATGAAGATGTAGTTCTTTTATGCTACTTG TAGTTAATCTTGTTTTTATTAATAGTAGAGCACACCACATATTAATTTTATATTGTAAAA AATGGACAGACTTGGTTGGCATGAGTGGGGTCTGGGGAAGGAATAACCGAGGCAAGCCTT ACCCCTGCATTTTTCTCAGAGGTTGCGTCGAATACAGGGCCTTTGGGTCAGTGAAAAGTC TTCCCACCAGAAAGACTTGAGAGGAGAAGGCAAATGCCTTACCATATGCATATAAACCTG GAGCTTTTGGAAGCCACACACTTGATCTGTGCGATGCTGATTGAAGTCCCCAATATGGCT GCCAGCACCTATGACAAGCGGAGACCTATGAGCAAAACATTCCGAAGGCTTCTTGAAGTG AGTGAAAGGCAGACATTTGTTGGGCCGCCCGAGAATGTGAGGGACCATGTAATGGCTGCC ACAAGAGCCCTCAACAAGGGTGATCACCAAAAGGCTTTCAGTGTCATAAATTCGTTGGAG ATTTGGAAGCTTTTGAGGAACAGAGAGCATGTTCTTGAGATGTTGGAGCTTAAGATCAAG GAGGAAGCTCTTAGAACCTATCTCTTTTCATACTCGTCTTCGTACGAGTCCTTAAGCCTT AACCAGCTCACTACCATGTTTGATCTCAGCGAGCAGCATGCCCACAGCATTGTTAGCAAG ATGATGATGCATGAAGAGCTTCATGCTAGCTGGGACCAGCCAACAAAGTGCATCGTATTC CATAGTGTGGACCAAACTAGGCTTCAGGGGCTACTCTTCCAGATGGCAGATAAGCTCTCG GTCCTGGTGGAGATCAATGAGAGGGCATACGAGGCAAGAACTGGTGGTACTCTCGAGGGG GTACCTCCCAGGCGCAGGGGCGAGGGTCAGGATAATATGGGAAAGTGGCAGGATAACTTT GTCTCGTCACAGGGGCGGCAGGGTGGTGGCAACAGGTTTGGATACTCCGGCAGAGGTGCA ATATCTGGTCAAAGTGGTGGTGGACACCAGAGGGACAGGGGCAATCAGGGTTACCGCGGG GGCTATGGTGGCGTTTCAAGGTTTCAGGATGCAAGGGGTCGCAACCAGTCTATTCCATCA GGCAGAGGTGGTGATGGTGGTGCACGCATGGTGAACCTGAACAGGATGGGTAGAGTTTAG AAGTGATAATTTTCAGCTCGAGTAAGCCTGAAATTCTCCTAAAAGCCAAGTTTTGAATCA CTGCTTTTTACATAGTTTCCTGTTCTGGGCTGAGCCATCCACCTGTTTCCTACATTTCGT TGTAGCCTTTTAATTTAAGGGGCTAGGAAATTGAACTAAGAGTTTGGTACTGTTTCGTGG GAGTGTGACTTCACTCCAATATTTGATATCTATCTGTGACACTTGCTATAACCT