Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002156_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:6878316:6881153:1 gene:Zm00001d002156 gene_biotype:protein_coding transcript_biotype:protein_coding description:Silencing group B protein

Sequence

ATGGTGTGCATCCGGCAGGCGACTATCGACGACCTGCTGGCGATGCAGGCGTGCAACTTG
ATGTGCCTGCCGGAGAACTACCAGATGAAGTACTACCTCTACCACATGCTGTCTTGGCCG
CAGCTCCTCTTCGTCGCCGAGGACTACGGCGGCCGCATCGTCGGCTACGTGCTCGCCAAG
ATGGAGGAGGACCCCTCCGAGCCCTGCCACGGCCACATCACCTCCCTCGCGGTGCTCCGC
TCCCACCGCAAGCTCGGGCTCGCCACCAAGCTCATGTCCGCCGCGCAGGCAGCCATGGAC
CAGGTCTTCGGCGCCGAGTACGTCTCCCTCCACGTCCGCCGATCCAACCGCGCCGCCTTC
AACCTCTACACCTCCACTCTCGGGTACCAGATCCACGACATCGAGGCCAAGTACTACGCC
GATGGAGAGGACGCGTTCGACATGCGCAAGCCTCTCCGGCAGCCGCAACCTAAGAAGCAC
CACCATCACCACCACCACGGCCCCGGTGGGTGCTGCTCCCACGACGCACCTACGGCGACG
ACTGGTTCTTCTCCTCAGTCTTTTAGTTCGCCGGATAAGAAGGCTAACACTTGA

Peptide Sequence

PEP ID

Zm00001d002156_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:6878316:6881153:1 gene:Zm00001d002156 transcript:Zm00001d002156_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Silencing group B protein

Sequence

MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAK
MEEDPSEPCHGHITSLAVLRSHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAF
NLYTSTLGYQIHDIEAKYYADGEDAFDMRKPLRQPQPKKHHHHHHHGPGGCCSHDAPTAT
TGSSPQSFSSPDKKANT

Transcript Sequence

Transcript ID

Zm00001d002156_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:6878316:6881153:1 gene:Zm00001d002156 gene_biotype:protein_coding transcript_biotype:protein_coding description:Silencing group B protein

Sequence

CCGAGACCTATCGCCGCAGAACCACCGAATCCACGGCATCGGAGAGTGTAGAGATGGTGT
GCATCCGGCAGGCGACTATCGACGACCTGCTGGCGATGCAGGCGTGCAACTTGATGTGCC
TGCCGGAGAACTACCAGATGAAGTACTACCTCTACCACATGCTGTCTTGGCCGCAGCTCC
TCTTCGTCGCCGAGGACTACGGCGGCCGCATCGTCGGCTACGTGCTCGCCAAGATGGAGG
AGGACCCCTCCGAGCCCTGCCACGGCCACATCACCTCCCTCGCGGTGCTCCGCTCCCACC
GCAAGCTCGGGCTCGCCACCAAGCTCATGTCCGCCGCGCAGGCAGCCATGGACCAGGTCT
TCGGCGCCGAGTACGTCTCCCTCCACGTCCGCCGATCCAACCGCGCCGCCTTCAACCTCT
ACACCTCCACTCTCGGGTACCAGATCCACGACATCGAGGCCAAGTACTACGCCGATGGAG
AGGACGCGTTCGACATGCGCAAGCCTCTCCGGCAGCCGCAACCTAAGAAGCACCACCATC
ACCACCACCACGGCCCCGGTGGGTGCTGCTCCCACGACGCACCTACGGCGACGACTGGTT
CTTCTCCTCAGTCTTTTAGTTCGCCGGATAAGAAGGCTAACACTTGACGGATGAAGCATA
TCTACAGAGAGGAGTCACCAAGCCCATTGGACTTCCGATACGCAGCTTTTTCTAATAGAA
TGGGAAACGAATTGTACTGTAATTGTTTGTGTACTTTACTTTGGCTCAATCGTCCGACCG
TATCTTTGTAATCAGTGAGAATGGCAAGCAAATGTCCTTGACATCTATTGTTATTGTAAA
AACATGTGTTATAACGCTGATTCTCAGATTACATTTGATTATTCGAGCTGACAATTTCTT
CAGGTTTTATACAGCAGAATGTAATGCGCAATATTATTGTCGGATCACTCAAATTACGGA