Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002148_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:6815484:6818482:1 gene:Zm00001d002148 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin-51
Sequence

ATGGCATCATCTTCGGACCCATGGATGAAGGAATACAATGAAGCATCCAGACTTGCTGAT
GACATCAGTTCCATGATTGCCGACAGAGGGTCTCTTCCACAATCAGGCCCAGAAATTATG
CGGCATACTTCAGCCATTCGGAGAAAAATAACTATTCTTGGTACTAGACTGGATAGCTTG
GAGTCATTGTTTGGCAGAATTCCTCCAAAGTCAATCACTGACAAGGAGATGCATAAACGC
CAAGACATGCTTTCCAGTTTGAAGTCTAAAGCCAAGCAGATGGCGACAAGTTTCAACATG
TCAAACTTCGCTAACAGGGAGGATCTGCTTGGTCAAAGTAAAATGCCAGATGACATGAGC
AGAGTTGCTGGGTTAGATAACCAAGGAATTGTTGGCCTTCAGAGGCAAATTATGAAAGAG
CAAGATGAGGGTCTCGAGAAGCTGGAAGAGACAGTGCTGAGCACGAAGCATATTGCATTA
GCAGTCAATGAAGAACTTACCCTGCACACAAGATTGATAGATGACCTTGAAGATCATGTT
GATGTTACAAATTCACGTCTTCAGCGTGTGCAAAAGAGGCTTGCAATTCTGAACAAGCGC
ACCAAAGGTGGTTGCTCATGCACGTGTCTGCTCCTATCTGTCGTTGCCATTGTGATTCTT
GCAGTCATTGTTTGGCTTCTCGTCAAGTATCTATAA

Peptide Sequence

PEP ID

Zm00001d002148_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:6815484:6818482:1 gene:Zm00001d002148 transcript:Zm00001d002148_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin-51
Sequence

MASSSDPWMKEYNEASRLADDISSMIADRGSLPQSGPEIMRHTSAIRRKITILGTRLDSL
ESLFGRIPPKSITDKEMHKRQDMLSSLKSKAKQMATSFNMSNFANREDLLGQSKMPDDMS
RVAGLDNQGIVGLQRQIMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLEDHV
DVTNSRLQRVQKRLAILNKRTKGGCSCTCLLLSVVAIVILAVIVWLLVKYL

Transcript Sequence

Transcript ID

Zm00001d002148_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:6815484:6818482:1 gene:Zm00001d002148 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin-51
Sequence

TCCAAATTCTGCTCACATGACGTGTTCTGTCATTTTGAATTAACCAGCAATGGCATCATC
TTCGGACCCATGGATGAAGGAATACAATGAAGCATCCAGACTTGCTGATGACATCAGTTC
CATGATTGCCGACAGAGGGTCTCTTCCACAATCAGGCCCAGAAATTATGCGGCATACTTC
AGCCATTCGGAGAAAAATAACTATTCTTGGTACTAGACTGGATAGCTTGGAGTCATTGTT
TGGCAGAATTCCTCCAAAGTCAATCACTGACAAGGAGATGCATAAACGCCAAGACATGCT
TTCCAGTTTGAAGTCTAAAGCCAAGCAGATGGCGACAAGTTTCAACATGTCAAACTTCGC
TAACAGGGAGGATCTGCTTGGTCAAAGTAAAATGCCAGATGACATGAGCAGAGTTGCTGG
GTTAGATAACCAAGGAATTGTTGGCCTTCAGAGGCAAATTATGAAAGAGCAAGATGAGGG
TCTCGAGAAGCTGGAAGAGACAGTGCTGAGCACGAAGCATATTGCATTAGCAGTCAATGA
AGAACTTACCCTGCACACAAGATTGATAGATGACCTTGAAGATCATGTTGATGTTACAAA
TTCACGTCTTCAGCGTGTGCAAAAGAGGCTTGCAATTCTGAACAAGCGCACCAAAGGTGG
TTGCTCATGCACGTGTCTGCTCCTATCTGTCGTTGCCATTGTGATTCTTGCAGTCATTGT
TTGGCTTCTCGTCAAGTATCTATAAAGAAAAGAAAGAAGCAGCCGGCTACCCTGCGGACC
TCTCTCGAAATGCTCACCTGCAGCCTTCGCTTGAAAAGTTCCTTCTGTGTTACTCCATAA
AATGTGCAGCCCTTTAAAATTAATATGTATACACGGTGGTTTCATCTTCCCTTCCATGAG
TGGAATGGTTATGGCTATGTACATTACATAGAATTTGGTACGTACATGATCATCATCTGC
ATGACTGCATTTTGTGTATGGCGTTTGTCAGTTTGCAATGACAGGGTGTTGATTTATTCT
GTGCCGTAAGCATTCTATG