Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002141_T023
CDS Infomation	cds chromosome:B73_RefGen_v4:2:6572183:6574223:-1 gene:Zm00001d002141 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBP1-associated protein 2A
Sequence	ATGGCGCCGAAGAAGCGCAAGGCCGATCCCGCCGAGTCCCCCGCCGCCGTGGAGGCAGCC ACCACCAACCACCGCCACGAGCCGGCGTCCTCGGAGCCCAAGCCACGCGGCTCCATCTAC TTCCCCATCACTGACGACCCGCCCGAACCCAACGCCGCCGAAGAGGACGAGGACGAGGGC GCCGGCGACGACGAGGACGACGCGGAGGACATTGTCAAGCTACTTGAGCCGCTGTCGCGG GAGCAGCTCGTTGCGCTGCTCCGCACGGCGGCGGAGGCGAGCCCCGCCACGATGGCGGCC GTCCGCCGCGCCGTTGAGGCCGACCCTGCCAGCAGGAAGCTCTTCGTCCACGGTCTCGGA TGGGGTGCCGGCGCCGAGGACCTCCGCTCCGCCTTCTCACGCTTCGGCGAGCTCGAGGAC TGCCGCGTCATCTCTGACAAGCAATCTGGTAGATCCAAGGGCTACGGGTTCGTCCTCTTC CGCTCCCGCCGCTCTGCGCTCCGCGCCCTCAACCGCCCTCAGCTCCAAATCGGTGGTCGT CTTGCTTTCTGTCACCTCGCCGCCTCAGGCCCCGCACCCCCAGCTCAGTCTCAGAACCCT ATCTCCAACGCCAACCCCAATGCTAACTCTAACTCCACGAGCAACGCTTCTGGATCCTCA TCATCACAAACTGACAATATACAACGCAAGATATTTGTTGGTAATGTGCATGCTGATGTG GACGTGGACCGCCTATATGAGTATTTTGCACAATTTGGTGAGATTGAAGAGGGCCCGTTG GGCTTTGACAAGAACACTGGCAGACCAAAGGGATTTGCATTATTTGTTTACAAGTCTGTG GAGAGTGCTCGCCGTGCTTTGGAGGAGCCAATAAAGAATTTTGATGGAAAGACACTCAAT GTGCAGAAAGCCATAGATGGGAGGACCAAGGGCTCATCTGGAATGAATACAAATACTAAC TCCAATCCCACTACTGCATCTGTGGTCGCCGCCCAGATGACTGCTCCTTCCAGTGTTGCC ATCAGCCCATATGATGCATCAGCATATAGTGCTACTGTGGTTCCTGACATGAGTTTTGCA CAGCAAGCTGCTATGCTGGGATTAGGTGCACAGCAACAGGCATTCACTCAACCCAATGCA ATGCTTGCCATGATAGCAGCAATGCAGAACCCAGCTGCGCTAGGGATGAGTCCAGCCATG CTTGCTGCTATGAACCCAGCCTTCGCCGCTGCTGCATTGGGTGCAGGGGGGCAGCAGGCA CACACAGTTGGTCTTACAGGTTTTGGAGCTCAGGGTTTTGGGACACCGTCGTTTGGAGCA GGTGCCGCTTTCCCAAATGCAGCAGGTGTTCAAGCAGCAGCAGCTGCATATCAAGGAAGT GGAGCTCCTCCTGGCTTTCAAGGGCCACCTGGGTTTCAGGTTGGCCAGGCAACTACCCAG ACAAGCACTGCAGCGGCAGCGGCTGGTTATCAGGCTGGGGCATCTGGGCAGGGCCAGGTG CCTGGTTCTCAGGTCGGAGGCACTGGTTTTCAGGGTGGATATTGA

Peptide Sequence

PEP ID	Zm00001d002141_P023
PEP Infomation	pep chromosome:B73_RefGen_v4:2:6572183:6574223:-1 gene:Zm00001d002141 transcript:Zm00001d002141_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBP1-associated protein 2A
Sequence	MAPKKRKADPAESPAAVEAATTNHRHEPASSEPKPRGSIYFPITDDPPEPNAAEEDEDEG AGDDEDDAEDIVKLLEPLSREQLVALLRTAAEASPATMAAVRRAVEADPASRKLFVHGLG WGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALNRPQLQIGGR LAFCHLAASGPAPPAQSQNPISNANPNANSNSTSNASGSSSSQTDNIQRKIFVGNVHADV DVDRLYEYFAQFGEIEEGPLGFDKNTGRPKGFALFVYKSVESARRALEEPIKNFDGKTLN VQKAIDGRTKGSSGMNTNTNSNPTTASVVAAQMTAPSSVAISPYDASAYSATVVPDMSFA QQAAMLGLGAQQQAFTQPNAMLAMIAAMQNPAALGMSPAMLAAMNPAFAAAALGAGGQQA HTVGLTGFGAQGFGTPSFGAGAAFPNAAGVQAAAAAYQGSGAPPGFQGPPGFQVGQATTQ TSTAAAAAGYQAGASGQGQVPGSQVGGTGFQGGY

Transcript Sequence

Transcript ID	Zm00001d002141_T023
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:6572183:6574223:-1 gene:Zm00001d002141 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBP1-associated protein 2A
Sequence	AATCACTAGTGTCGCAAATCCCAATCTCCCAGCTTGCGCCTAAACCCTAGCTTGCCTATC GATGGCGCCGAAGAAGCGCAAGGCCGATCCCGCCGAGTCCCCCGCCGCCGTGGAGGCAGC CACCACCAACCACCGCCACGAGCCGGCGTCCTCGGAGCCCAAGCCACGCGGCTCCATCTA CTTCCCCATCACTGACGACCCGCCCGAACCCAACGCCGCCGAAGAGGACGAGGACGAGGG CGCCGGCGACGACGAGGACGACGCGGAGGACATTGTCAAGCTACTTGAGCCGCTGTCGCG GGAGCAGCTCGTTGCGCTGCTCCGCACGGCGGCGGAGGCGAGCCCCGCCACGATGGCGGC CGTCCGCCGCGCCGTTGAGGCCGACCCTGCCAGCAGGAAGCTCTTCGTCCACGGTCTCGG ATGGGGTGCCGGCGCCGAGGACCTCCGCTCCGCCTTCTCACGCTTCGGCGAGCTCGAGGA CTGCCGCGTCATCTCTGACAAGCAATCTGGTAGATCCAAGGGCTACGGGTTCGTCCTCTT CCGCTCCCGCCGCTCTGCGCTCCGCGCCCTCAACCGCCCTCAGCTCCAAATCGGTGGTCG TCTTGCTTTCTGTCACCTCGCCGCCTCAGGCCCCGCACCCCCAGCTCAGTCTCAGAACCC TATCTCCAACGCCAACCCCAATGCTAACTCTAACTCCACGAGCAACGCTTCTGGATCCTC ATCATCACAAACTGACAATATACAACGCAAGATATTTGTTGGTAATGTGCATGCTGATGT GGACGTGGACCGCCTATATGAGTATTTTGCACAATTTGGTGAGATTGAAGAGGGCCCGTT GGGCTTTGACAAGAACACTGGCAGACCAAAGGGATTTGCATTATTTGTTTACAAGTCTGT GGAGAGTGCTCGCCGTGCTTTGGAGGAGCCAATAAAGAATTTTGATGGAAAGACACTCAA TGTGCAGAAAGCCATAGATGGGAGGACCAAGGGCTCATCTGGAATGAATACAAATACTAA CTCCAATCCCACTACTGCATCTGTGGTCGCCGCCCAGATGACTGCTCCTTCCAGTGTTGC CATCAGCCCATATGATGCATCAGCATATAGTGCTACTGTGGTTCCTGACATGAGTTTTGC ACAGCAAGCTGCTATGCTGGGATTAGGTGCACAGCAACAGGCATTCACTCAACCCAATGC AATGCTTGCCATGATAGCAGCAATGCAGAACCCAGCTGCGCTAGGGATGAGTCCAGCCAT GCTTGCTGCTATGAACCCAGCCTTCGCCGCTGCTGCATTGGGTGCAGGGGGGCAGCAGGC ACACACAGTTGGTCTTACAGGTTTTGGAGCTCAGGGTTTTGGGACACCGTCGTTTGGAGC AGGTGCCGCTTTCCCAAATGCAGCAGGTGTTCAAGCAGCAGCAGCTGCATATCAAGGAAG TGGAGCTCCTCCTGGCTTTCAAGGGCCACCTGGGTTTCAGGTTGGCCAGGCAACTACCCA GACAAGCACTGCAGCGGCAGCGGCTGGTTATCAGGCTGGGGCATCTGGGCAGGGCCAGGT GCCTGGTTCTCAGGTCGGAGGCACTGGTTTTCAGGGTGGATATTGACAGAACTAGTTTGG CATCTGTGGTCCGTGGTTCGTTCATGTGGTTTTGCATTCGGATGGCTTTTGAGTCTATAT TGGTGCCAAAATGTAGCGAAAGGCTTCCTGCTGTTGAATTTTACAACTGGATTTGAACCA GATGCCTTTGTAGCAGTATTTGAAGGAGGAACTTTCTTGAAGGATCATATCGTTTTATTG CCTAATATGTAGTTTTGCTATTGCGGCTTCATTATGTACTTTGTGGATGTGTACTGGGTT TCATGTATCAAAATATCTGTATTTTG