Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002115_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:6097528:6101330:-1 gene:Zm00001d002115 gene_biotype:protein_coding transcript_biotype:protein_coding description:Microtubule-associated protein RP/EB family member 1B
Sequence

ATGGCGGCGAGCATCGGGATCATGGACGGCGCCTACTTCGTCGGCAGGGGCGAGATCCTG
CACTGGATCAATGCGACCCTCCAGCTCTCCCTCGCCAAGGTCGAGGAGGCAGCGTCTGGC
GCAGTGCAGTGCCAGCTCATGGATATGGTTCACCCTGGAGTGGTGCCCATGCATAAGGTC
AATTTCGATGCGAAGACAGAATATGACATGATCCAGAACTACAAGGTTCTTCAGGACGTG
TTCAACAAGCTGCGGATAGGCAAGAATATTGAGGTCAACAAGCTTGTTAAAGGACGGCCA
TTGGACAACTTGGAGTTCCTTCAGTGGTTGAAAAGATATTGTGATTCTGTGAATGGTGGA
ATTATGAACGAAAACTACAACCCTGTAGAAAGGAGGTCAAAGGGATGCAAAGAACGTGTC
TCAAAGGGTTCCAATAAGCCATCTAAATCATTGCAAGCCAATAGGCTTTCTGGTGCTGAT
CCAACAGATGGAGGCCATGGAGTTGGGAAAGTATGTAACACTTTTTCTGAAGAGCATTAC
ATAGAACAGATTCAGAAGTTGTCTGAAAAGATGACTAAGGCGGTCCGGAAGATACTTTAT
GCAGCTGATGCAAAGGATTCACCGCTACCTGAGGCGAATGATATAATCACAAAGTCACCA
AGCTTGTTCTCAAATGAAACCGAGTGA

Peptide Sequence

PEP ID

Zm00001d002115_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:6097528:6101330:-1 gene:Zm00001d002115 transcript:Zm00001d002115_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Microtubule-associated protein RP/EB family member 1B
Sequence

MAASIGIMDGAYFVGRGEILHWINATLQLSLAKVEEAASGAVQCQLMDMVHPGVVPMHKV
NFDAKTEYDMIQNYKVLQDVFNKLRIGKNIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGG
IMNENYNPVERRSKGCKERVSKGSNKPSKSLQANRLSGADPTDGGHGVGKVCNTFSEEHY
IEQIQKLSEKMTKAVRKILYAADAKDSPLPEANDIITKSPSLFSNETE

Transcript Sequence

Transcript ID

Zm00001d002115_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:6097528:6101330:-1 gene:Zm00001d002115 gene_biotype:protein_coding transcript_biotype:protein_coding description:Microtubule-associated protein RP/EB family member 1B
Sequence

CTCCGCCGTTTCGCGTGGGAGTCGTTTCGAAAAAGTCTGTTTCGCGAGCGGTGAGGACTG
AGGAGTGTGGAGGCCTAAAACCATGGCGGCGAGCATCGGGATCATGGACGGCGCCTACTT
CGTCGGCAGGGGCGAGATCCTGCACTGGATCAATGCGACCCTCCAGCTCTCCCTCGCCAA
GGTCGAGGAGGCAGCGTCTGGCGCAGTGCAGTGCCAGCTCATGGATATGGTTCACCCTGG
AGTGGTGCCCATGCATAAGGTCAATTTCGATGCGAAGACAGAATATGACATGATCCAGAA
CTACAAGGTTCTTCAGGACGTGTTCAACAAGCTGCGGATAGGCAAGAATATTGAGGTCAA
CAAGCTTGTTAAAGGACGGCCATTGGACAACTTGGAGTTCCTTCAGTGGTTGAAAAGATA
TTGTGATTCTGTGAATGGTGGAATTATGAACGAAAACTACAACCCTGTAGAAAGGAGGTC
AAAGGGATGCAAAGAACGTGTCTCAAAGGGTTCCAATAAGCCATCTAAATCATTGCAAGC
CAATAGGCTTTCTGGTGCTGATCCAACAGATGGAGGCCATGGAGTTGGGAAAGTATGTAA
CACTTTTTCTGAAGAGCATTACATAGAACAGATTCAGAAGTTGTCTGAAAAGATGACTAA
GGCGGTCCGGAAGATACTTTATGCAGCTGATGCAAAGGATTCACCGCTACCTGAGGCGAA
TGATATAATCACAAAGTCACCAAGCTTGTTCTCAAATGAAACCGAGTGAGATGTGCGGCT
ACATGAGCTAATTTTGGTGCTTATTTTCCATCATTGATCGTCTTAGTTTTGAGTCTGTAA
ATGCGTAAAATAACATTTGACACAAGTCTTTTTGCTGTCAAAAACAGTTTTCCTGTAAGA
ACTTGAGTGGGGTTAATTAGTTATTACGCAT