Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002084_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:2:5711305:5715286:1 gene:Zm00001d002084 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (ubiquitin-hydrolase) domain-containing protein
Sequence

ATGTTCGTCCTGCGAATCCAGTCCGTCGACTTCCCCGACGCCGCCGTGGCAGCAGTCGCC
GCCGACGAAGTCGGCACCAGCAGCGGCGGCGTTACCACCTCTCGTCCGCTCTCCAGCCAC
CCTCCCCCCTCTACCACCACATCGTCCATACTTACTCTCGAGCTCCCCGGCGCAAACCCC
GTCGCGCCCAGCCGAAGCCCTAGGATCCTCCACACCCGCGGCGTCATCCACCTCTACCAC
TCGTCGTCCTCCACTTCCACCTCCTCCTCCTACGCCTCGGCGGTCGCAGCCACCTCTTCC
TCCTCATCCGGGCCGGCCACCCCGCAGCCCGCCTCCGACTCGCACCTGCCCCTATGTCGC
GGCACGCGCCTCCTGGTGCTCGCCGTTCCGACGCGCGTTTCGCCGGAGGACTTTGTTCGC
TTCTGCGGCCCCCACCTCGAGTGTGCAGCCGACATTCGTTTCATCAGGGATGATGGAGTG
GAGGACCGGTACAGCGTTCTAGTGGAGTTTGAGGACCAGAGTAGCGCTGAATGGTTCTAC
GCCGATCTCAATGGCTGGAGGTTCTCAACCTCTGAGAGTGAGGTGTGCCATGTTCTGTTT
ATAGCTGCTGTGCAGTATACACCTTCCTCAGAGGTTGCCACAACTCCACCGGCTGGATCC
ACTGAACTTCCAATGTGTCCTGTTTGCATTGCAACCCTTCATCTATTATTTTCACTTTTC
ATATTTTGTTGGTTGTTTAAGTTGTCTGCCTTGTTTCTGGTACACCTAACTATTTTCTGC
CATCTTAATATGTTAATTTGTCAGAAAGATTGGATCAGGACATCAGTGGGATTTTGGCAA
CTACTTGTGATCACTCTTTCCGTTGCTCATGTGTTTCAGTGTGGACCAATTCATCCTGTC
CGTAAGTGGACTGCAAGGAAAAATATTGAGTTTGGTCATGTTAACCACGTATGCCAGTTT
TGTCAGAAGCAGTCTGAAAATTCTACATGTTCTGTTTGCCAAACCACTGGAAACCTCTGG
ATATGTGTGATATGTGGTTTTGTTGGATGCGGACGGTATCAAGAAGGACATGCGAAACAG
CACTGGAAAGATACTCAGCATTGCTATTCGCTAGATTTGGAAACACAACGTGTTTGGGAC
TATGTTGGTGACAGTTTTGTACATCGGCTGAATCAATCCAAGAGTGACGCAAAGCATGCT
AAGTTCAAATCAAAAAGTAAATATTCTGGGGATGAATGTGTAAACTGCTCGTGCAATGAT
GACTCTGATATGGGTGGAGCTATGTTCAGCAGCAAAGCTGAAACAATTGTGGACGAGTAC
AATCGTCTCCTGGCAAGCCAACTTGAAACTCAGAGAGAGTATTATGAGGGCCTGTTGTCT
GAGGCTAAAAGAAACAAGGAGCACCAGATTTCTGAAGCTGCTGATAAAGCTGTAAGTGAT
AAGCTTGAAGAGATGCAACTTAAGCTCGAGAATCTTATTGTGGAGAAAAAGAAAGTTGCA
GATATGAACGAAAAACTCACTAGGAGCCAAGACATGTGGCGCCAGACACTAAGAGATATA
GAGGAAAGGGAAAGAGCACAGTTGAAGTCGAAGGACGAAATGATTCTCGATCTGGAAGAA
CAGATAAAGGATTTCAAATTTTCCATCAAACTGCAGAAGTCAATAGAGAAGAACGATGGT
GTCAAGGGTGGTACGCTGGTTCCACTCCCTACGGTTTCAGATTCTGGAGGCAAGGGTAAA
AGGTCATCAAGAACAAGCAAGAGGAGGAATTAG

Peptide Sequence

PEP ID

Zm00001d002084_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:2:5711305:5715286:1 gene:Zm00001d002084 transcript:Zm00001d002084_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (ubiquitin-hydrolase) domain-containing protein
Sequence

MFVLRIQSVDFPDAAVAAVAADEVGTSSGGVTTSRPLSSHPPPSTTTSSILTLELPGANP
VAPSRSPRILHTRGVIHLYHSSSSTSTSSSYASAVAATSSSSSGPATPQPASDSHLPLCR
GTRLLVLAVPTRVSPEDFVRFCGPHLECAADIRFIRDDGVEDRYSVLVEFEDQSSAEWFY
ADLNGWRFSTSESEVCHVLFIAAVQYTPSSEVATTPPAGSTELPMCPVCIATLHLLFSLF
IFCWLFKLSALFLVHLTIFCHLNMLICQKDWIRTSVGFWQLLVITLSVAHVFQCGPIHPV
RKWTARKNIEFGHVNHVCQFCQKQSENSTCSVCQTTGNLWICVICGFVGCGRYQEGHAKQ
HWKDTQHCYSLDLETQRVWDYVGDSFVHRLNQSKSDAKHAKFKSKSKYSGDECVNCSCND
DSDMGGAMFSSKAETIVDEYNRLLASQLETQREYYEGLLSEAKRNKEHQISEAADKAVSD
KLEEMQLKLENLIVEKKKVADMNEKLTRSQDMWRQTLRDIEERERAQLKSKDEMILDLEE
QIKDFKFSIKLQKSIEKNDGVKGGTLVPLPTVSDSGGKGKRSSRTSKRRN

Transcript Sequence

Transcript ID

Zm00001d002084_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:5711305:5715286:1 gene:Zm00001d002084 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (ubiquitin-hydrolase) domain-containing protein
Sequence

GAACCCAGCCATCATGTTCGTCCTGCGAATCCAGTCCGTCGACTTCCCCGACGCCGCCGT
GGCAGCAGTCGCCGCCGACGAAGTCGGCACCAGCAGCGGCGGCGTTACCACCTCTCGTCC
GCTCTCCAGCCACCCTCCCCCCTCTACCACCACATCGTCCATACTTACTCTCGAGCTCCC
CGGCGCAAACCCCGTCGCGCCCAGCCGAAGCCCTAGGATCCTCCACACCCGCGGCGTCAT
CCACCTCTACCACTCGTCGTCCTCCACTTCCACCTCCTCCTCCTACGCCTCGGCGGTCGC
AGCCACCTCTTCCTCCTCATCCGGGCCGGCCACCCCGCAGCCCGCCTCCGACTCGCACCT
GCCCCTATGTCGCGGCACGCGCCTCCTGGTGCTCGCCGTTCCGACGCGCGTTTCGCCGGA
GGACTTTGTTCGCTTCTGCGGCCCCCACCTCGAGTGTGCAGCCGACATTCGTTTCATCAG
GGATGATGGAGTGGAGGACCGGTACAGCGTTCTAGTGGAGTTTGAGGACCAGAGTAGCGC
TGAATGGTTCTACGCCGATCTCAATGGCTGGAGGTTCTCAACCTCTGAGAGTGAGGTGTG
CCATGTTCTGTTTATAGCTGCTGTGCAGTATACACCTTCCTCAGAGGTTGCCACAACTCC
ACCGGCTGGATCCACTGAACTTCCAATGTGTCCTGTTTGCATTGCAACCCTTCATCTATT
ATTTTCACTTTTCATATTTTGTTGGTTGTTTAAGTTGTCTGCCTTGTTTCTGGTACACCT
AACTATTTTCTGCCATCTTAATATGTTAATTTGTCAGAAAGATTGGATCAGGACATCAGT
GGGATTTTGGCAACTACTTGTGATCACTCTTTCCGTTGCTCATGTGTTTCAGTGTGGACC
AATTCATCCTGTCCGTAAGTGGACTGCAAGGAAAAATATTGAGTTTGGTCATGTTAACCA
CGTATGCCAGTTTTGTCAGAAGCAGTCTGAAAATTCTACATGTTCTGTTTGCCAAACCAC
TGGAAACCTCTGGATATGTGTGATATGTGGTTTTGTTGGATGCGGACGGTATCAAGAAGG
ACATGCGAAACAGCACTGGAAAGATACTCAGCATTGCTATTCGCTAGATTTGGAAACACA
ACGTGTTTGGGACTATGTTGGTGACAGTTTTGTACATCGGCTGAATCAATCCAAGAGTGA
CGCAAAGCATGCTAAGTTCAAATCAAAAAGTAAATATTCTGGGGATGAATGTGTAAACTG
CTCGTGCAATGATGACTCTGATATGGGTGGAGCTATGTTCAGCAGCAAAGCTGAAACAAT
TGTGGACGAGTACAATCGTCTCCTGGCAAGCCAACTTGAAACTCAGAGAGAGTATTATGA
GGGCCTGTTGTCTGAGGCTAAAAGAAACAAGGAGCACCAGATTTCTGAAGCTGCTGATAA
AGCTGTAAGTGATAAGCTTGAAGAGATGCAACTTAAGCTCGAGAATCTTATTGTGGAGAA
AAAGAAAGTTGCAGATATGAACGAAAAACTCACTAGGAGCCAAGACATGTGGCGCCAGAC
ACTAAGAGATATAGAGGAAAGGGAAAGAGCACAGTTGAAGTCGAAGGACGAAATGATTCT
CGATCTGGAAGAACAGATAAAGGATTTCAAATTTTCCATCAAACTGCAGAAGTCAATAGA
GAAGAACGATGGTGTCAAGGGTGGTACGCTGGTTCCACTCCCTACGGTTTCAGATTCTGG
AGGCAAGGGTAAAAGGTCATCAAGAACAAGCAAGAGGAGGAATTAGTATCCTTTGCTGAG
TAGCAATTAGTCTTGACTGGAACAGACGTATACGAACCTTATTGGCATGTATTTACTAGC
CTGTTATGATGAACTACAGCGTGATGTTTGATTTGTCACGAAAATTAGTACGATCATAAA
CTGCTTCGAAGATTTGAACTTGGATACTACATGTGGAAAATACAATCTAAATCGAAGTAC
AGCCAGTTATTTCGT