Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002080_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:5508384:5514971:-1 gene:Zm00001d002080 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase MBR2
Sequence

ATGCAAGGACAGAGGAATTCTATGGAGCATTTTGCTGATGTCTTTGGATTCGACGTTGCA
TCGAGTTCAGGCAACCCTGTGATGGATCAGCAGTCATATTGGAATAATGTTCTTGGATCA
GTAGAATCACATAATCTTCAAGGTTATCAGATGGCTCACAGTGATGCCGCCATGCCATAT
GGAAATGAACCACAGCAAGATGGTACATTTCTTGGTTTCTGGGAATCAGGCGAAGCAAGT
TCAAGTGCCAGTGCACTAAACTATGGCAGCTCTAATAATGTCAAAACAGAGCATCTTAAC
ATTGGTGGTGGAGGTGGACTGAGGATTGGTGAAAGCCGACTGGTAGCTGACAATGGCATT
TCTCTGGATGTGGATATCAACCTTAACGCCAACGTTAACGATCTTTGTGGTCAAAGTTCA
AATGTTAACTGTGCCTCTCAAGGTCCTGAGCAGTATTGTGGCAGTGATCGTAATGCTATA
AATTCTCAGCCGACTGACCTGGGATTACACCCATTCAGGACATTCCTACTAGATGCACAG
CAAGCAGAATCTTTTACTTTGAATCCTAGTGAAAACCCTTTGGGTGATTTTTCATCAATG
CAAGAAAGCATTGAACAAAGACCAGGTGGTTCCCTGGATGGTCGCCGGCTAGCGTGCAAG
AGAAAAAATATTGAAGGAGCCAATGGCCAGAGTTCAGCAGGTGCTAGTACAAGTTTTCCC
CACAGGAACGATAATGCATTCCATAACATTGCTTCTTCAAGTTACAATCCTGCACCTATC
AGAAATTCATCCTCTCCCAAGTGTTTGCCAGTTCCAAGTTCTATTGAAGATCAACTCCCA
CGGTATGGAACTAATGTAGGGCTCTCAGCCGGTACTTATGACCTTCATGGAGGGGTCAAC
AATGCTGTGAATTCACAGAGAAGTTTCCGAGCAAGAACTACCACATCTCAACAGGTTGCT
CCCTGTAGTGTATGGCCCTCTTCAAATGCTATCAGACTTTCTAATTCATGGAATCACCAG
CCACCTCATTTCCAAAGTGCATTTGATGATCCCCAGGAGGTTATTCCTGTGGTCAGCAGC
CTCAACTTGCAATACCAACATCCAATGAATGTTCCTGGTGTGCCACAGGCTGCTAACCGT
TTCACTGACCATGGAGCTTCATCATCGAGAGCTGGGAGTTTGGAGAACAGAATTATTGGT
AGTGAAGAGGTTCCTAGGAGGTATGCCGCGCCTACCAACTACTCTGATTTAGTTCCCCCA
CCTGCAGTAGACCTGAGACGTTTGGTGCCAGAACCATTTAATTGGAGTTCTGATGTCCGA
GGCACTGCAATATCAGGAAGTATTATTCCTCCTGTATCAAGAACTAATAACAGTTCAACA
GTTAATCCACCAGCAGGATTCAATCACCAAAACCTCACCAGACGCCATCCTCGAAATTTA
TCAGAGGAGATTGGTCGTCTATCTGGAGCACTCCGCGGCCATCAACCCCCACGCTTAAGG
TCAGGGTTTCTGTTGGAGCGTCAGGGCGATGGTGTTTGGGGCGTTCCTTTATCAACAAGG
GGTAGAGAAGGAAGAAGGTTAATGGAGATTCGGAATGCACTTGAAATGATTCAAAGGGGG
GAAAATGTAAGGCTCGAGTCTATCTTCTATGGCGGCCTCGACATTCATGACAGACACAGG
GACATGCGCCTTGACATTGACAATATGTCCTATGAGGAACTATTAGCACTTGAGGAAAGG
ATCGGAAATGTTAGCACTGGCCTCAGCGAGGAAGCTGTGATAAAGTTGCTCAAACAAAGG
AAATTTTCATCGTGGAGACTAAAAGCATCTTTGGACCCAGAACCATGCTGTATTTGCCAG
GAGGAGTACGTTGATGGAGACGATCTCGGGAGGCTGGACTGCGGGCACGACTTCCATGCT
GGCTGCATCAAGCAATGGCTGGTGGTGAAGAACGTGTGCCCCATCTGCAAGAACACCGCA
TTGAAGGCCTGA

Peptide Sequence

PEP ID

Zm00001d002080_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:5508384:5514971:-1 gene:Zm00001d002080 transcript:Zm00001d002080_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase MBR2
Sequence

MQGQRNSMEHFADVFGFDVASSSGNPVMDQQSYWNNVLGSVESHNLQGYQMAHSDAAMPY
GNEPQQDGTFLGFWESGEASSSASALNYGSSNNVKTEHLNIGGGGGLRIGESRLVADNGI
SLDVDINLNANVNDLCGQSSNVNCASQGPEQYCGSDRNAINSQPTDLGLHPFRTFLLDAQ
QAESFTLNPSENPLGDFSSMQESIEQRPGGSLDGRRLACKRKNIEGANGQSSAGASTSFP
HRNDNAFHNIASSSYNPAPIRNSSSPKCLPVPSSIEDQLPRYGTNVGLSAGTYDLHGGVN
NAVNSQRSFRARTTTSQQVAPCSVWPSSNAIRLSNSWNHQPPHFQSAFDDPQEVIPVVSS
LNLQYQHPMNVPGVPQAANRFTDHGASSSRAGSLENRIIGSEEVPRRYAAPTNYSDLVPP
PAVDLRRLVPEPFNWSSDVRGTAISGSIIPPVSRTNNSSTVNPPAGFNHQNLTRRHPRNL
SEEIGRLSGALRGHQPPRLRSGFLLERQGDGVWGVPLSTRGREGRRLMEIRNALEMIQRG
ENVRLESIFYGGLDIHDRHRDMRLDIDNMSYEELLALEERIGNVSTGLSEEAVIKLLKQR
KFSSWRLKASLDPEPCCICQEEYVDGDDLGRLDCGHDFHAGCIKQWLVVKNVCPICKNTA
LKA

Transcript Sequence

Transcript ID

Zm00001d002080_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:5508384:5514971:-1 gene:Zm00001d002080 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase MBR2
Sequence

GGGGCGCATTTAGTGGGGGGAGGAAAAGGGATCCTTGCGAAGACCCAGACGCCAGAGGGG
AGTGAGGGAGAGGGGAGGGAGAAATAAATAAACCCGAATTCAGCCAAACTTCTCTCTCCC
ACCGCGCTTGCATCCTCTCATCGCCACCCCACCCTCCTCCTCCCTGTCTTTCTCCCCCCC
TCTCTCTCCCCCTCTTGACAAATTTTCCTCCACCCATTCCCTTCCTCCCCTCTTCTTCTT
CTCCACCCACTCCACCGATCCCCCTCTTTCTCTCTGAATTCTCTCTCGTCGTGCCCACCC
TTCCATCTGTCTGCTGCCTCTCTCTCTCGCAATCAGTCACTCGGCTCTTGTTTCTTCCGT
CTGCTGGGTTGATTCTTTCTCTTCCTCTCCGTGGAGAAACAGGAGGAGAGAGGAAAGAAG
AGAAATCGGAACCAGCCTGTTCTTTTTGCCTGGATTGCGGTTCTTGCGAGTTGTTCAGAA
ACTCTGGGCCAGTTTCTGGTCCTTTAAACTACTGGAAAGAGGAACCATCAGAGATGCCAA
GGCAGCCAACAAATTGATATCTAATTGCCCTACTTTGGATCATCATAATGCAAGGACAGA
GGAATTCTATGGAGCATTTTGCTGATGTCTTTGGATTCGACGTTGCATCGAGTTCAGGCA
ACCCTGTGATGGATCAGCAGTCATATTGGAATAATGTTCTTGGATCAGTAGAATCACATA
ATCTTCAAGGTTATCAGATGGCTCACAGTGATGCCGCCATGCCATATGGAAATGAACCAC
AGCAAGATGGTACATTTCTTGGTTTCTGGGAATCAGGCGAAGCAAGTTCAAGTGCCAGTG
CACTAAACTATGGCAGCTCTAATAATGTCAAAACAGAGCATCTTAACATTGGTGGTGGAG
GTGGACTGAGGATTGGTGAAAGCCGACTGGTAGCTGACAATGGCATTTCTCTGGATGTGG
ATATCAACCTTAACGCCAACGTTAACGATCTTTGTGGTCAAAGTTCAAATGTTAACTGTG
CCTCTCAAGGTCCTGAGCAGTATTGTGGCAGTGATCGTAATGCTATAAATTCTCAGCCGA
CTGACCTGGGATTACACCCATTCAGGACATTCCTACTAGATGCACAGCAAGCAGAATCTT
TTACTTTGAATCCTAGTGAAAACCCTTTGGGTGATTTTTCATCAATGCAAGAAAGCATTG
AACAAAGACCAGGTGGTTCCCTGGATGGTCGCCGGCTAGCGTGCAAGAGAAAAAATATTG
AAGGAGCCAATGGCCAGAGTTCAGCAGGTGCTAGTACAAGTTTTCCCCACAGGAACGATA
ATGCATTCCATAACATTGCTTCTTCAAGTTACAATCCTGCACCTATCAGAAATTCATCCT
CTCCCAAGTGTTTGCCAGTTCCAAGTTCTATTGAAGATCAACTCCCACGGTATGGAACTA
ATGTAGGGCTCTCAGCCGGTACTTATGACCTTCATGGAGGGGTCAACAATGCTGTGAATT
CACAGAGAAGTTTCCGAGCAAGAACTACCACATCTCAACAGGTTGCTCCCTGTAGTGTAT
GGCCCTCTTCAAATGCTATCAGACTTTCTAATTCATGGAATCACCAGCCACCTCATTTCC
AAAGTGCATTTGATGATCCCCAGGAGGTTATTCCTGTGGTCAGCAGCCTCAACTTGCAAT
ACCAACATCCAATGAATGTTCCTGGTGTGCCACAGGCTGCTAACCGTTTCACTGACCATG
GAGCTTCATCATCGAGAGCTGGGAGTTTGGAGAACAGAATTATTGGTAGTGAAGAGGTTC
CTAGGAGGTATGCCGCGCCTACCAACTACTCTGATTTAGTTCCCCCACCTGCAGTAGACC
TGAGACGTTTGGTGCCAGAACCATTTAATTGGAGTTCTGATGTCCGAGGCACTGCAATAT
CAGGAAGTATTATTCCTCCTGTATCAAGAACTAATAACAGTTCAACAGTTAATCCACCAG
CAGGATTCAATCACCAAAACCTCACCAGACGCCATCCTCGAAATTTATCAGAGGAGATTG
GTCGTCTATCTGGAGCACTCCGCGGCCATCAACCCCCACGCTTAAGGTCAGGGTTTCTGT
TGGAGCGTCAGGGCGATGGTGTTTGGGGCGTTCCTTTATCAACAAGGGGTAGAGAAGGAA
GAAGGTTAATGGAGATTCGGAATGCACTTGAAATGATTCAAAGGGGGGAAAATGTAAGGC
TCGAGTCTATCTTCTATGGCGGCCTCGACATTCATGACAGACACAGGGACATGCGCCTTG
ACATTGACAATATGTCCTATGAGGAACTATTAGCACTTGAGGAAAGGATCGGAAATGTTA
GCACTGGCCTCAGCGAGGAAGCTGTGATAAAGTTGCTCAAACAAAGGAAATTTTCATCGT
GGAGACTAAAAGCATCTTTGGACCCAGAACCATGCTGTATTTGCCAGGAGGAGTACGTTG
ATGGAGACGATCTCGGGAGGCTGGACTGCGGGCACGACTTCCATGCTGGCTGCATCAAGC
AATGGCTGGTGGTGAAGAACGTGTGCCCCATCTGCAAGAACACCGCATTGAAGGCCTGAA
ACCGAACAAAGGCCCGTCAGAGACACACCCATGTTCCGTGTCCATTCGATCGGTCGCAAG
ATCATTTACCCGATTGGTTTTTACTATGCGTTTTTTGGTTGGGAAAATTTTGCCATTTCA
CCTGGGAAAGTGGTGGGGGGGTGTTGGAGGTGGAAGAGAAGATGGCGGTCCCTGTAAACT
GCTGCTGCTGCTGCTGCAGTAAATAATCCCTGGAATTTGTCTCCCTGCATTTAAACAAAA
TATTTATGGCTGTTATAATGGACGCCGTCGTAGGGTTATAACTTGAAAGATAGCATTGTG
TGCCACCACCCGCCATAATTCTACTTGATCTGGATTTCA