Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d002027_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:4656738:4661389:1 gene:Zm00001d002027 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP9 signalosome complex subunit 5b
Sequence

ATGGAGCCCACCTCATCGGCGTCGATCGCGCGGCAGACGTGGGAGCTGGAGAACAATATC
CCCGCGGCGGCCTCCGACCCGGACGCGATGGACGCGATCTACCGCTACGACGACGCGTCT
CAGGCGCGGGCGCAGCAGGAGAAGCCTTGGGCCAACGACCCGCACCACTTCCGCCGCACC
AAGATCTCCGCGCTCGCGCTGCTCAAGATGGTTGTCCACGCCCGCGCCGGGGGCACCATC
GAGGTCATGGGGCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCATCGTTATGGACGCA
TTCGCGCTCCCCGTTGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGATGCCTACGAG
TACATGGTTGACTACTCAACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGC
TGGTATCACTCGCACCCTGGCTATGGATGCTGGCTGTCAGGAATCGACGTGTCAACTCAG
ATGCTCAATCAACAATTCACAGAACCATTCTTGGCAGTTGTGATAGACCCCACAAGGACA
GTTTCTGCTGGTAAAGTGGAGATTGGAGCCTTTAGAACATACCCAAAAGATTACAAGCCA
CCAGATGAGCCTGTATCTGAGTATCAGACTATTCCACTCAACAAGATAGAAGATTTTGGT
GTCCATTGCAAATCGTCATCCCTGGATTCTCACCTCCTTGATCTGCTCTGGAACAAATAT
TGGGTCAACACGCTATCTTCATCATCGCTTCTGGGCAACAGAGATTATGTTGCTGGGCAG
ATCTTTGATTTAGCTGATAAACTAGAGCAAGCTGAAGGCCAGCTGGCACACAGTCGATTT
GGTGGTATGATTATGCCATCGCAACGAAAGAAAGAGCAAGAAGAGTCTCCACTGGCTAAG
GTAACACGAGATAGCTCCAAAATCACAGCTGAGCAGGTTCACGGCCTCATGTCACAGGTC
ATAAAAGACATCCTTTTCAACTCTGTTCACCCGTCAAGCAAGGCAAGCACAAGTGCTCCA
CCAGATTCATCCGGTCCTGAGCCTATGGTTGAAGCCTGA

Peptide Sequence

PEP ID

Zm00001d002027_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:4656738:4661389:1 gene:Zm00001d002027 transcript:Zm00001d002027_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP9 signalosome complex subunit 5b
Sequence

MEPTSSASIARQTWELENNIPAAASDPDAMDAIYRYDDASQARAQQEKPWANDPHHFRRT
KISALALLKMVVHARAGGTIEVMGLMQGKCEGDAIIVMDAFALPVEGTETRVNAQADAYE
YMVDYSTINKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFTEPFLAVVIDPTRT
VSAGKVEIGAFRTYPKDYKPPDEPVSEYQTIPLNKIEDFGVHCKSSSLDSHLLDLLWNKY
WVNTLSSSSLLGNRDYVAGQIFDLADKLEQAEGQLAHSRFGGMIMPSQRKKEQEESPLAK
VTRDSSKITAEQVHGLMSQVIKDILFNSVHPSSKASTSAPPDSSGPEPMVEA

Transcript Sequence

Transcript ID

Zm00001d002027_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:4656738:4661389:1 gene:Zm00001d002027 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP9 signalosome complex subunit 5b
Sequence

CTCCTCGACCTCGGCCTCTCCTCTTCCTCCTCCGCTCCCAAAATCCTAGGGTTTTGCTCG
CCGCGGCGCGATGGAGCCCACCTCATCGGCGTCGATCGCGCGGCAGACGTGGGAGCTGGA
GAACAATATCCCCGCGGCGGCCTCCGACCCGGACGCGATGGACGCGATCTACCGCTACGA
CGACGCGTCTCAGGCGCGGGCGCAGCAGGAGAAGCCTTGGGCCAACGACCCGCACCACTT
CCGCCGCACCAAGATCTCCGCGCTCGCGCTGCTCAAGATGGTTGTCCACGCCCGCGCCGG
GGGCACCATCGAGGTCATGGGGCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCATCGT
TATGGACGCATTCGCGCTCCCCGTTGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGA
TGCCTACGAGTACATGGTTGACTACTCAACCATCAACAAGCAGGCTGGAAGGTTGGAGAA
TGTGGTTGGCTGGTATCACTCGCACCCTGGCTATGGATGCTGGCTGTCAGGAATCGACGT
GTCAACTCAGATGCTCAATCAACAATTCACAGAACCATTCTTGGCAGTTGTGATAGACCC
CACAAGGACAGTTTCTGCTGGTAAAGTGGAGATTGGAGCCTTTAGAACATACCCAAAAGA
TTACAAGCCACCAGATGAGCCTGTATCTGAGTATCAGACTATTCCACTCAACAAGATAGA
AGATTTTGGTGTCCATTGCAAATCGTCATCCCTGGATTCTCACCTCCTTGATCTGCTCTG
GAACAAATATTGGGTCAACACGCTATCTTCATCATCGCTTCTGGGCAACAGAGATTATGT
TGCTGGGCAGATCTTTGATTTAGCTGATAAACTAGAGCAAGCTGAAGGCCAGCTGGCACA
CAGTCGATTTGGTGGTATGATTATGCCATCGCAACGAAAGAAAGAGCAAGAAGAGTCTCC
ACTGGCTAAGGTAACACGAGATAGCTCCAAAATCACAGCTGAGCAGGTTCACGGCCTCAT
GTCACAGGTCATAAAAGACATCCTTTTCAACTCTGTTCACCCGTCAAGCAAGGCAAGCAC
AAGTGCTCCACCAGATTCATCCGGTCCTGAGCCTATGGTTGAAGCCTGAGTTCCAGCGGA
AGGGGACAATGGATATTTGTGTTATGTTATCTGATTCAGAAGGTGCAAAACAAGTTATCT
TTTGAGTACAGAATCATCATGTAATTATGAGTTGCCATCTTGGGCTGCCACTGAGAGGGT
GTGATTTGGGTCCGGTTAGCAATCTCATGTATTGGATTTCGGATCAGTATTCGAAGCTT