Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002022_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:2:4547650:4551905:1 gene:Zm00001d002022 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium exchanger2 description:Vacuolar cation/proton exchanger 2
Sequence	ATGATGATGGAGACCCCTCAAATCGAGATGGGCGGTTTCAAGGTCAACAGCCCGCAAGTG CCCAACGGCGTGTTGCGGCCCACCGTGTCTTCCTCCTGGAACTCGCGAGGGACGGTCGAG AGGGCGCTCAAGAGCATCAGGATCGTCATTTTCACTTCCAAGCTCAACTTGCTCATGCCG TTCGGGCCTGCGTCCATCATTCTCCACTTCACGACTAGGAGGCATGGATTGATTTTCCTT TTCAGCATGCTAGGAATAACACCTTTAGCTGAGCGTTTAGGATATGCAACTGAGCAGCTT GCAATATACACTGGTCCAACAGTTGGTGGCCTTCTGAATGCTACATTTGGAAATGCAACC GAAATGATCATTGCAGTATATGCTTTGAAAAATGGAATGATCCGAGTAGTGCAGCAGTCA CTATTGGGTTCCATATTGTCAAATATGCTGTTGGTTATGGGTTGTGCTTTCTTTGCTGGT GGTGTTGTTCACCGCAACAAAGACCAAATCTTCAGTAAGGCAACTGCAGTTGTCAACTCA GGTTTACTGTTGATGGCTGTCATGGGATTGATGTTTCCTGCCGTTCTTCATTTCACTCAT TCAGAAGTGCGTCAAGGGGCATCAGAGGTTGCACTTTCAAGGTTCAGTAGTTGTATTATG CTTGTGGCGTATGCCAGCTATCTCTATTTCCAATTAAGTGGACGGAGCAACATTTACAGT CCAATAGGCAGTGAAGAGGCGCCTATTGAGGATATTGCAGAGGAAGATGAAGAAGCTGAG ATTGGCATGTGGGAGGCAGTAACATGGCTTGCGGTTTTAACACTCTGGGTGTCTTTTCTT TCTGAGTACCTAGTTAACGCCATTGAGGGAGCATCTGATTCATTGAACCTACCGGTGGCT TTTATCAGTGTTATTTTGCTTCCTATTGTGGGCAATGCAGCTGAACATGCAAGTGCAATA ATGTTTGCCATGAAAGATAAGCTTGACATAACACTGGGTGTTGCAATTGGTTCATCAACA CAGATATCAATGTTTGTGATTCCATTTTGTGTTGTTATTGGTTGGATGATGGGACAAAGG ATGGACTTGAATTTTCAGCTATTTGAGACAGCAACTCTCTTCATAACAGTGCTTGTGGTA GCATTTATGCTACAGGATGGGACTGCGAACTACTTGAAAGGACTTATGCTGATCCTATGT TATCTAATAGTTGCTGCCAGTTTCTTTGTTCATGTTGATCCACAATCAAGTGAGTAG

Peptide Sequence

PEP ID	Zm00001d002022_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:2:4547650:4551905:1 gene:Zm00001d002022 transcript:Zm00001d002022_T014 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium exchanger2 description:Vacuolar cation/proton exchanger 2
Sequence	MMMETPQIEMGGFKVNSPQVPNGVLRPTVSSSWNSRGTVERALKSIRIVIFTSKLNLLMP FGPASIILHFTTRRHGLIFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNAT EMIIAVYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGVVHRNKDQIFSKATAVVNS GLLLMAVMGLMFPAVLHFTHSEVRQGASEVALSRFSSCIMLVAYASYLYFQLSGRSNIYS PIGSEEAPIEDIAEEDEEAEIGMWEAVTWLAVLTLWVSFLSEYLVNAIEGASDSLNLPVA FISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQR MDLNFQLFETATLFITVLVVAFMLQDGTANYLKGLMLILCYLIVAASFFVHVDPQSSE

Transcript Sequence

Transcript ID	Zm00001d002022_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:4547650:4551905:1 gene:Zm00001d002022 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium exchanger2 description:Vacuolar cation/proton exchanger 2
Sequence	CTCTGCCGCAGCGTCTGTGTCCAGACTTATGATGATGGAGACCCCTCAAATCGAGATGGG CGGTTTCAAGGTCAACAGCCCGCAAGTGCCCAACGGCGTGTTGCGGCCCACCGTGTCTTC CTCCTGGAACTCGCGAGGGACGGTCGAGAGGGCGCTCAAGAGCATCAGGATCGTCATTTT CACTTCCAAGCTCAACTTGCTCATGCCGTTCGGGCCTGCGTCCATCATTCTCCACTTCAC GACTAGGAGGCATGGATTGATTTTCCTTTTCAGCATGCTAGGAATAACACCTTTAGCTGA GCGTTTAGGATATGCAACTGAGCAGCTTGCAATATACACTGGTCCAACAGTTGGTGGCCT TCTGAATGCTACATTTGGAAATGCAACCGAAATGATCATTGCAGTATATGCTTTGAAAAA TGGAATGATCCGAGTAGTGCAGCAGTCACTATTGGGTTCCATATTGTCAAATATGCTGTT GGTTATGGGTTGTGCTTTCTTTGCTGGTGGTGTTGTTCACCGCAACAAAGACCAAATCTT CAGTAAGGCAACTGCAGTTGTCAACTCAGGTTTACTGTTGATGGCTGTCATGGGATTGAT GTTTCCTGCCGTTCTTCATTTCACTCATTCAGAAGTGCGTCAAGGGGCATCAGAGGTTGC ACTTTCAAGGTTCAGTAGTTGTATTATGCTTGTGGCGTATGCCAGCTATCTCTATTTCCA ATTAAGTGGACGGAGCAACATTTACAGTCCAATAGGCAGTGAAGAGGCGCCTATTGAGGA TATTGCAGAGGAAGATGAAGAAGCTGAGATTGGCATGTGGGAGGCAGTAACATGGCTTGC GGTTTTAACACTCTGGGTGTCTTTTCTTTCTGAGTACCTAGTTAACGCCATTGAGGGAGC ATCTGATTCATTGAACCTACCGGTGGCTTTTATCAGTGTTATTTTGCTTCCTATTGTGGG CAATGCAGCTGAACATGCAAGTGCAATAATGTTTGCCATGAAAGATAAGCTTGACATAAC ACTGGGTGTTGCAATTGGTTCATCAACACAGATATCAATGTTTGTGATTCCATTTTGTGT TGTTATTGGTTGGATGATGGGACAAAGGATGGACTTGAATTTTCAGCTATTTGAGACAGC AACTCTCTTCATAACAGTGCTTGTGGTAGCATTTATGCTACAGGATGGGACTGCGAACTA CTTGAAAGGACTTATGCTGATCCTATGTTATCTAATAGTTGCTGCCAGTTTCTTTGTTCA TGTTGATCCACAATCAAGTGAGTAGGATTTTCATACTTAGACCCGTTTATGCTATTTTCC TTATTCCAGTTAGTTTAGTTAATTTGCTTGTCAAGAATCTTCCTTGTACTGTTCGTTTGT TCCACTTTATGACTTGTTCGGTTT