Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d002000_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:2:4150931:4154237:1 gene:Zm00001d002000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase6 description: lipoxygenase6
Sequence	ATGATCGCCGGGGCGAACCCGGTGTGCATCAAGCGCGTCACCAAGTTCCCGCTGGCGAGC GAGCTTGACCGCGGGGTGTTCGGCGACCAGGACAGCAAGATAACCAAGGACCATGTCGAG AAGAACATGGGCGGCATGACGGTGCAGCAGGCCGTAGAGGAGGGGAGGCTGTACGTCGTG GACCACCACGACTGGGTGATGCCATACCTGAAGCGCATCAACGAGCTCCCTGCGAGCGAG GAGAAGGCGGAGGTGTCGCAGAGGAAGGTGTACGCCGCCAGAACGCTCCTGTTCCTGGAC GGCGAGGACTCGTCGATGCTCAGACCGCTGGCGATCGAGCTCAGCTCGCCGCACCCGGAG AAGGAGCAGCTCGGCGCGGTCAGCACGGTGTACACTCCACCGGACAGCGGGGACGACGGC ATCACGGCCGGGAGGTTCTCAACCTGGGAACTGGCAAAGGTTTACGCCTCTGCCAACGAC GCAGCCGAGAACAACTTCGTCACTCACTGGCTCAACACGCACGCATCCATGGAGCCGATC GTGATCGCGGCGAACCGGCAGCTGAGCGTGCTGCACCCAATCCACAGGCTCCTCAAGCCG CACTTCCGGAAGACGCTCCACATCAACGCCGTCGCACGCCAGATCATCGTCGGCTCGGGT GACCAGAGGAAGGACGGCAGCGTCTTCCGTGGCATAGACGAGGTCACGTACTTCCCCAGC AAGTACAACATGGAGATGTCCTCCAAGGCGTACAAAGCCTGGAACTTCACGGACCTTGCT CTTCCCAACGATCTCATCAAGAGAGGTCTGGCAAAAGGAGATCCAAAGAAGCCAGAGACG GTGGAGCTGGCGATAAAGGACTACCCGTACGCGGTGGACGGGCTCGACATGTGGGCGGCG ATCAAGAAGTGGGTGGCTGACTACTGCGCCATCTACTACGCCGACGACGGCGCGGTGGCG AGGGACAGCGAGCTGCAGGGGTGGTGGAGCGAGGTCAGGAACGTGGGGCACGGCGACCTG GCGGACGCGCCGTGGTGGCCGGCGATGGACTGCGTCGCCGACCTCGTGGAGACCTGCGCC ACCGTCGTCTGGCTGAGCTCGGCGTACCACGCGTCCATCAGCTTCGGGCAGTACGACTAC CTGGGCTTCGTCCCGAACGGGCCCTCCATCACCACGCGGCCGGTGCCGGGCCCGGACGCC GGGGCGGAGGTCACGGAGTCGGACTTCCTGGCGAGCGTCACGCCGGTCACCGAGGCGCTC GGCTTCATGTCCATCGCCTCGGGGCCGATGGGGCTCAAGGGCACGGAGGTGTACCTGGGG CAGCGCCCGGACACGGAGCAGTGGACGCGCGAGCGGAGGGCGGCCGAGGCGCTGGCGGAG TTCCGGGCGAGGTTGGAGGAGGTCGCGGGCAACATCGACAGGCGGAACGCGGACCCTGCG CTGAAGAACCGGACGGGGCAGGTGGAGGTGCCCTATACGCTGCTCAAGCCGACGGCACAG CCCGGACTGGTGCTCCGTGGCATACCCAACAGCATCACCGTTTGA

Peptide Sequence

PEP ID	Zm00001d002000_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:2:4150931:4154237:1 gene:Zm00001d002000 transcript:Zm00001d002000_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase6 description: lipoxygenase6
Sequence	MIAGANPVCIKRVTKFPLASELDRGVFGDQDSKITKDHVEKNMGGMTVQQAVEEGRLYVV DHHDWVMPYLKRINELPASEEKAEVSQRKVYAARTLLFLDGEDSSMLRPLAIELSSPHPE KEQLGAVSTVYTPPDSGDDGITAGRFSTWELAKVYASANDAAENNFVTHWLNTHASMEPI VIAANRQLSVLHPIHRLLKPHFRKTLHINAVARQIIVGSGDQRKDGSVFRGIDEVTYFPS KYNMEMSSKAYKAWNFTDLALPNDLIKRGLAKGDPKKPETVELAIKDYPYAVDGLDMWAA IKKWVADYCAIYYADDGAVARDSELQGWWSEVRNVGHGDLADAPWWPAMDCVADLVETCA TVVWLSSAYHASISFGQYDYLGFVPNGPSITTRPVPGPDAGAEVTESDFLASVTPVTEAL GFMSIASGPMGLKGTEVYLGQRPDTEQWTRERRAAEALAEFRARLEEVAGNIDRRNADPA LKNRTGQVEVPYTLLKPTAQPGLVLRGIPNSITV

Transcript Sequence

Transcript ID	Zm00001d002000_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:4150931:4154237:1 gene:Zm00001d002000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase6 description: lipoxygenase6
Sequence	GATCCCGACGGGCGCGGGGTGAAGGCGGAGGCGTCGGTGCTGGACGCCGTCGTGGGCAGC GGGGACAGCGAGCTCGACGTGGACCTGATCTGGGACGAGGCGCTGGGCGCGCCCGGCGCG GTGGTGGTGAAGAACCACTCCGACTTCCCCGTGTACCTGAGGCTGCTGAGCGTGCCGGCC GGCGTCGGCGGCGCCGACGACGAGGCCGCCGCCGTCCACTTCGCCTGCAACGGATGGGTG TACCCCGTCGACAAGCACCCGTACCGCCTCTTCTTCACCAACGACGCGTGTGTCAAGGAA GAAACGCCGAGCGCCCTGCTCAAGTACCGGGAGGACGAGCTCGGCGCGCTCCGGGGAGAC GGCGAGACGACGGAGCGACCGTTCCAGCCGTGGGACCGCGTGTACGACTACGCGCTGTAC AACGACCTGGGGAACCCAGACCTGCGCCAGGACCTGGCGCGCCCCGTGCTGGGAGGATCC CAGGAGTACCCGTACCCTCGGCGTACCAAGACCGGCCGACCAGCCGCCAAAACAGATCCT CGGTCGGAGAGCAGAGCGCCGCTGGACGAAGAGATCTACGTCCCCTGCGACGAGCGCGTC GGCTTCGCCAGCATCCCCGCGCCGACGCTTCCGCCGCTGGGCGGGCACTTCAGGTCCCTC GCCGATGTCTACCGCCTCTTCGGCCTCGACGACCTCGGCCGGCTCCCGGAGGCCAAGGCG GTCATCAACAGCGGCGCGCCGTTCCCCGTCGTGCCTCAGGTCATTTCAGTGAACCCGACA CATTGGCGGAAGGACGAAGAGTTCGCGCGGCAGATGATCGCCGGGGCGAACCCGGTGTGC ATCAAGCGCGTCACCAAGTTCCCGCTGGCGAGCGAGCTTGACCGCGGGGTGTTCGGCGAC CAGGACAGCAAGATAACCAAGGACCATGTCGAGAAGAACATGGGCGGCATGACGGTGCAG CAGGCCGTAGAGGAGGGGAGGCTGTACGTCGTGGACCACCACGACTGGGTGATGCCATAC CTGAAGCGCATCAACGAGCTCCCTGCGAGCGAGGAGAAGGCGGAGGTGTCGCAGAGGAAG GTGTACGCCGCCAGAACGCTCCTGTTCCTGGACGGCGAGGACTCGTCGATGCTCAGACCG CTGGCGATCGAGCTCAGCTCGCCGCACCCGGAGAAGGAGCAGCTCGGCGCGGTCAGCACG GTGTACACTCCACCGGACAGCGGGGACGACGGCATCACGGCCGGGAGGTTCTCAACCTGG GAACTGGCAAAGGTTTACGCCTCTGCCAACGACGCAGCCGAGAACAACTTCGTCACTCAC TGGCTCAACACGCACGCATCCATGGAGCCGATCGTGATCGCGGCGAACCGGCAGCTGAGC GTGCTGCACCCAATCCACAGGCTCCTCAAGCCGCACTTCCGGAAGACGCTCCACATCAAC GCCGTCGCACGCCAGATCATCGTCGGCTCGGGTGACCAGAGGAAGGACGGCAGCGTCTTC CGTGGCATAGACGAGGTCACGTACTTCCCCAGCAAGTACAACATGGAGATGTCCTCCAAG GCGTACAAAGCCTGGAACTTCACGGACCTTGCTCTTCCCAACGATCTCATCAAGAGAGGT CTGGCAAAAGGAGATCCAAAGAAGCCAGAGACGGTGGAGCTGGCGATAAAGGACTACCCG TACGCGGTGGACGGGCTCGACATGTGGGCGGCGATCAAGAAGTGGGTGGCTGACTACTGC GCCATCTACTACGCCGACGACGGCGCGGTGGCGAGGGACAGCGAGCTGCAGGGGTGGTGG AGCGAGGTCAGGAACGTGGGGCACGGCGACCTGGCGGACGCGCCGTGGTGGCCGGCGATG GACTGCGTCGCCGACCTCGTGGAGACCTGCGCCACCGTCGTCTGGCTGAGCTCGGCGTAC CACGCGTCCATCAGCTTCGGGCAGTACGACTACCTGGGCTTCGTCCCGAACGGGCCCTCC ATCACCACGCGGCCGGTGCCGGGCCCGGACGCCGGGGCGGAGGTCACGGAGTCGGACTTC CTGGCGAGCGTCACGCCGGTCACCGAGGCGCTCGGCTTCATGTCCATCGCCTCGGGGCCG ATGGGGCTCAAGGGCACGGAGGTGTACCTGGGGCAGCGCCCGGACACGGAGCAGTGGACG CGCGAGCGGAGGGCGGCCGAGGCGCTGGCGGAGTTCCGGGCGAGGTTGGAGGAGGTCGCG GGCAACATCGACAGGCGGAACGCGGACCCTGCGCTGAAGAACCGGACGGGGCAGGTGGAG GTGCCCTATACGCTGCTCAAGCCGACGGCACAGCCCGGACTGGTGCTCCGTGGCATACCC AACAGCATCACCGTTTGAGCAGCAGAGCGCCGTCGGCAGCTGTCAGCTGTGTACAGTACA GAATAATAAGGTGGTCGTGTTTGGCGCTATCTCCACCACATAAACGTGAAAATGTTTTTT TTTGAATTATATGGACATGCAGGGCCGCAGCCCGTAAGCCTGGCCCCAGTTTCGGTTTTC TGTTTTTTTTTTTTTTGCCTCGATCTGGTGATCAGCAAGCCACGTCGGTCCGGGTGATCT CGCTACCGGAGATAGAATGTGTACACGAAACCTAATAGGTTTTTACTCCATTAGGATACG AGGTTGAGTCAATTTTCATACCTATAGATTTGTTAATGAGCATAAAT