Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d001959_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:3543871:3549932:1 gene:Zm00001d001959 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP cyclohydrolase I 1

Sequence

ATGGGAGCGCTCGAGGAGGCCCACCTCGCGGCCGCCGCGTGCGCGTGCGAGGAGGAGGAG
GAAAGCGACTACATCGGCTTCCTCGCAGGGGAAGCGGCGGCGGGCGACGCCGTGGAGCCG
GCCGTGCGCGCCCTGCTGCTGGGGCTCGGTGAGGACGACCGCCGCGAGGGCCTGCTCCGG
ACGCCCAAGCGCGTCGCCAAGGCCTTCCGCGACGGCACCCGAGGCTACAGGCAAAAAGTA
AAAGACATAGTGCAAGGTGCTCTGTTTCCAGAGGTTGGTGTGGATAAAAGGACTGGATCT
GCTGGTGGAACTGGCGGGCAAGTAGTTGTTCGAGACATTGAACTTTTCTCCTATTGTGAG
TCATGCTTGCTTCCATTCAGCATACAGTGCCATGTCGGGTATGTTCCCTCAGGTGGAAGA
GTGGTTGGGTTAAGCAAGCTTTCTAGAGTATCTGATGTCTTTGCCAAGAGATTGCAAAAC
CCTCAAAGACTAGCTAATGAAATCTGTGGTGCACTGCATGCTAGCATTCAACCTGCTGGT
GTGGCTGTTGCTCTGCAGTGCTGGCACATTCCTTTACCAGAAAACTTGGAATGCAAGACT
TTGGAAGGTTGGATTAGAACTTCACATTCATCTCGCTCTGGAGTCTTTGAAGGTGAAAGC
AGCACTTTCTGGAGTGACTTCTTGGCTCTTGTTAAGCTTAGGGGCATAGACGTGGAGGCT
AAGGACCGTACTGTTTCTATTCCTTGGTGCCCTTTAAGGTCTCATGAGGTTCCACTCTCT
AACGGGCTCTGCAAGAAAAACTCAACTAATGGCATGGTTTCTGCTGTTACCTCGATGCTC
TTATCACTCGGAGAGGACCCCCTCAGGAAAGAGCTTTTAGGCACTCCTCAGCGTTATGTG
CAGTGGCTGATGAAGTTCAAAGCATGTAATCTACTAGACGTGAAGCTGAATGGTTTTACA
CTTAGTAATGTTAGCTTATATGAGAGGACAGGTGGAGGCACAACTGATCATGGAGCAATC
AGATCGGAGCTGCACTTGCCATTTTGTGCTCAATGTGAACACCATCTTCTGCCCTTCTAC
GGAGTAGTTCACATTGGGTACTTTGGCAATGGAAGCGGAGAAGGCATTGATCGGTCGCAT
TTTCAGGCGTTGGTTCATTTCTACGGGTGCAAGCTTCAGGTTCAAGAAAGGATGACAAGG
CAGATAGCTGAAGCGGTTTATTCAGTTTCGCACAATGGGGCCATGGTCGTTGTTGAGGCC
AACCACATTTGCATGATCTCAAGGGGGATAGAGAAAATAAGGAGCAACACGGCAACAATT
GCAGTTTTGGGCCAGTTTTTGGCCGACCCTTCTGCCAAGGCGTGCTTCTTACAGAATGTT
TTGGATTCTGTTGGTTCTGCGGTATGA

Peptide Sequence

PEP ID

Zm00001d001959_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:3543871:3549932:1 gene:Zm00001d001959 transcript:Zm00001d001959_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP cyclohydrolase I 1

Sequence

MGALEEAHLAAAACACEEEEESDYIGFLAGEAAAGDAVEPAVRALLLGLGEDDRREGLLR
TPKRVAKAFRDGTRGYRQKVKDIVQGALFPEVGVDKRTGSAGGTGGQVVVRDIELFSYCE
SCLLPFSIQCHVGYVPSGGRVVGLSKLSRVSDVFAKRLQNPQRLANEICGALHASIQPAG
VAVALQCWHIPLPENLECKTLEGWIRTSHSSRSGVFEGESSTFWSDFLALVKLRGIDVEA
KDRTVSIPWCPLRSHEVPLSNGLCKKNSTNGMVSAVTSMLLSLGEDPLRKELLGTPQRYV
QWLMKFKACNLLDVKLNGFTLSNVSLYERTGGGTTDHGAIRSELHLPFCAQCEHHLLPFY
GVVHIGYFGNGSGEGIDRSHFQALVHFYGCKLQVQERMTRQIAEAVYSVSHNGAMVVVEA
NHICMISRGIEKIRSNTATIAVLGQFLADPSAKACFLQNVLDSVGSAV

Transcript Sequence

Transcript ID

Zm00001d001959_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:3543871:3549932:1 gene:Zm00001d001959 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP cyclohydrolase I 1

Sequence

ATCCCTCCCTCCCTCATCGCGTTTTATTATTCCCGTCGTTCTTCATTCGGCCCTTCGCCG
CTGCTATATTTCGCGGCCGCCTTGCCTCCTAATAATAGCCGCCGCGGGCAGTGGATACCG
ACACCGCCACCGCCATGGGAGCGCTCGAGGAGGCCCACCTCGCGGCCGCCGCGTGCGCGT
GCGAGGAGGAGGAGGAAAGCGACTACATCGGCTTCCTCGCAGGGGAAGCGGCGGCGGGCG
ACGCCGTGGAGCCGGCCGTGCGCGCCCTGCTGCTGGGGCTCGGTGAGGACGACCGCCGCG
AGGGCCTGCTCCGGACGCCCAAGCGCGTCGCCAAGGCCTTCCGCGACGGCACCCGAGGCT
ACAGGCAAAAAGTAAAAGACATAGTGCAAGGTGCTCTGTTTCCAGAGGTTGGTGTGGATA
AAAGGACTGGATCTGCTGGTGGAACTGGCGGGCAAGTAGTTGTTCGAGACATTGAACTTT
TCTCCTATTGTGAGTCATGCTTGCTTCCATTCAGCATACAGTGCCATGTCGGGTATGTTC
CCTCAGGTGGAAGAGTGGTTGGGTTAAGCAAGCTTTCTAGAGTATCTGATGTCTTTGCCA
AGAGATTGCAAAACCCTCAAAGACTAGCTAATGAAATCTGTGGTGCACTGCATGCTAGCA
TTCAACCTGCTGGTGTGGCTGTTGCTCTGCAGTGCTGGCACATTCCTTTACCAGAAAACT
TGGAATGCAAGACTTTGGAAGGTTGGATTAGAACTTCACATTCATCTCGCTCTGGAGTCT
TTGAAGGTGAAAGCAGCACTTTCTGGAGTGACTTCTTGGCTCTTGTTAAGCTTAGGGGCA
TAGACGTGGAGGCTAAGGACCGTACTGTTTCTATTCCTTGGTGCCCTTTAAGGTCTCATG
AGGTTCCACTCTCTAACGGGCTCTGCAAGAAAAACTCAACTAATGGCATGGTTTCTGCTG
TTACCTCGATGCTCTTATCACTCGGAGAGGACCCCCTCAGGAAAGAGCTTTTAGGCACTC
CTCAGCGTTATGTGCAGTGGCTGATGAAGTTCAAAGCATGTAATCTACTAGACGTGAAGC
TGAATGGTTTTACACTTAGTAATGTTAGCTTATATGAGAGGACAGGTGGAGGCACAACTG
ATCATGGAGCAATCAGATCGGAGCTGCACTTGCCATTTTGTGCTCAATGTGAACACCATC
TTCTGCCCTTCTACGGAGTAGTTCACATTGGGTACTTTGGCAATGGAAGCGGAGAAGGCA
TTGATCGGTCGCATTTTCAGGCGTTGGTTCATTTCTACGGGTGCAAGCTTCAGGTTCAAG
AAAGGATGACAAGGCAGATAGCTGAAGCGGTTTATTCAGTTTCGCACAATGGGGCCATGG
TCGTTGTTGAGGCCAACCACATTTGCATGATCTCAAGGGGGATAGAGAAAATAAGGAGCA
ACACGGCAACAATTGCAGTTTTGGGCCAGTTTTTGGCCGACCCTTCTGCCAAGGCGTGCT
TCTTACAGAATGTTTTGGATTCTGTTGGTTCTGCGGTATGAATCGTATCGCAAGCAGCAA
AGAAAAAAATGTCTAGTTGGAGTACTATCCAGCAATTGAAATTTTTAGCAATCTACTGGT
CTAGCATGATTCTTCTCGGGTGCAAATTTGTCACCTGTGGGACTGTACCGAGGATGTCAC
AAGAAAGCACCAAAAGGGTTTTGGTTCTCTCGTGTTGTACCATGTCACTTGTAAGGCACT
TCAAATAAAAAAGAAATAGTAATAGTTACAACTGTGCCAAGAAGGATATAGTCATTCGTA
CTTTTAGATGTTGTCAAAATTGCCATTTGTTCTTGAAATTTTAGTGGAGATTACTCTGGC
TTTTGTTGTTGTACCGTTGAATTTGATGTTACGCCGATCGAGATCAGTAAAAAAAAAAAA
CT