Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d001933_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:3097389:3101616:-1 gene:Zm00001d001933 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 316 description:Zinc finger CCCH domain-containing protein 52
Sequence

ATGCTGAATCTAAGTAGCTCTGCTGTATCTGCGCCATCAAGAACTCATGTGGATCATGCC
GCTCTTACCGGTGCCTCTCATCCAGCTTCTACGGTCAAGACACGCATGTGCACCAAGTAC
AACACTACAGAAGGCTGCAAGTTCGGTGATAAGTGCCATTTCGCTCATAGCGAAAGAGAG
CTTGCGAAGCCAGCCTACATGTCTCAAGAAGGACCTCCTATGGGTGGTCGATATGGACGA
GCTGAACCTATGCAACCAGCTGCCATGGGCCCTCCAGCAGGAAACTTTGGTGCCTCGGCG
ACTGCCAAGATCAGTGTGGACGCCTCTCTGGCCGGTGGCATAATCGGCAAGGGTGGGGTC
AACACTAAGCAGATAAGTAGAATTACAGGCGTCAAGCTCTCCATCCGCGACCACGAGTCT
AACCCCAACCTAAAGAACATCGAGCTGGAAGGCAATTTTGACCAGATCAAGCAAGCCAGC
GACTTGGTGCGTGATCTCATCGCAACCATCAGCGCAAGCATGCCAGCGAAAAATCCATCT
GCTGCCGCGGCACCAGCAGGAGGAGGCCGAGGCGGTGGTCCAGGGGGCAAGAGCAGCAAC
TACAAGACGAAGCTGTGCGAGAACTTCTTGAAGGGTGCCTGTACTTTTGGTGACCGGTGC
CACTTCGCCCATGGCGAGACGGAGCAGCGGAGAGGTGCTGCATGA

Peptide Sequence

PEP ID

Zm00001d001933_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:3097389:3101616:-1 gene:Zm00001d001933 transcript:Zm00001d001933_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 316 description:Zinc finger CCCH domain-containing protein 52
Sequence

MLNLSSSAVSAPSRTHVDHAALTGASHPASTVKTRMCTKYNTTEGCKFGDKCHFAHSERE
LAKPAYMSQEGPPMGGRYGRAEPMQPAAMGPPAGNFGASATAKISVDASLAGGIIGKGGV
NTKQISRITGVKLSIRDHESNPNLKNIELEGNFDQIKQASDLVRDLIATISASMPAKNPS
AAAAPAGGGRGGGPGGKSSNYKTKLCENFLKGACTFGDRCHFAHGETEQRRGAA

Transcript Sequence

Transcript ID

Zm00001d001933_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:3097389:3101616:-1 gene:Zm00001d001933 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 316 description:Zinc finger CCCH domain-containing protein 52
Sequence

GCTTCCGACCTCGTAGCGAATCGGACCGGGGGGCTAGGGTTCCGGTGCGCCTCTGCAATC
GGACGCGAGGCTAGGCTGGGCATGGAGGGAACCGCTGCGGCCCGGAAGAGGTCCCGGCCG
GAGACGGCGAACGGGGCTGCCGCCGCCGGGAAGCGCTCCAAAGACACGGAGTCATTTCAA
ACTGGTCTATCAAGCAAATCGAAGCCTTGCACCAAAAATGCTGAATCTAAGTAGCTCTGC
TGTATCTGCGCCATCAAGAACTCATGTGGATCATGCCGCTCTTACCGGTGCCTCTCATCC
AGCTTCTACGGTCAAGACACGCATGTGCACCAAGTACAACACTACAGAAGGCTGCAAGTT
CGGTGATAAGTGCCATTTCGCTCATAGCGAAAGAGAGCTTGCGAAGCCAGCCTACATGTC
TCAAGAAGGACCTCCTATGGGTGGTCGATATGGACGAGCTGAACCTATGCAACCAGCTGC
CATGGGCCCTCCAGCAGGAAACTTTGGTGCCTCGGCGACTGCCAAGATCAGTGTGGACGC
CTCTCTGGCCGGTGGCATAATCGGCAAGGGTGGGGTCAACACTAAGCAGATAAGTAGAAT
TACAGGCGTCAAGCTCTCCATCCGCGACCACGAGTCTAACCCCAACCTAAAGAACATCGA
GCTGGAAGGCAATTTTGACCAGATCAAGCAAGCCAGCGACTTGGTGCGTGATCTCATCGC
AACCATCAGCGCAAGCATGCCAGCGAAAAATCCATCTGCTGCCGCGGCACCAGCAGGAGG
AGGCCGAGGCGGTGGTCCAGGGGGCAAGAGCAGCAACTACAAGACGAAGCTGTGCGAGAA
CTTCTTGAAGGGTGCCTGTACTTTTGGTGACCGGTGCCACTTCGCCCATGGCGAGACGGA
GCAGCGGAGAGGTGCTGCATGAGAGTCGAGGTGCTCTAGGCAATGAGATGCCATGTGCTC
CCTCCTTTTGCTACTGTGAATTTTCGCCTTGCAGCGCTAGGCGGTTGGACTGTTGTGTTG
TGTTGCGACGTCAATGGATTAAACTCTAGATTT