Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d001908_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:2689185:2697141:1 gene:Zm00001d001908 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alternative oxidase
Sequence	ATGGTTGTGCGGCGGCTGGGCGGCACGGGGCGCGCGCTGCTCACGCTCCCCAACATCCGG AGGCGGGCGTCCAACTCCTGGGCCGCCGTCTGCGACACCTTCTTCTCCACCAAGCAAGTG TTCGAGAGCCACCGCATCGTCTTCACCGTCGGCACCTCAATCGCCTCCGTCCTCACGGCT TGGGCCGGTTATTCACTTCGCCATGTGCAACAATTAAAGATTGAAAGGAGGCTTGAGTCA ATTGAATCATCTGTACGCGTTAGGCTGGCGAGGCGGTGCTTGGTACGCTCGAAGGGCCTT CAGAAGAGAGCAGCAAAAGCTGATGATGGGTCACATGAAGTCGTCACAGAACAGGTGGCA CTGGCGGCCCTTCAACAGGCTCAGGAACAGCAGCACTGCCGTGCCGAGCCGGAGGCCGAG CTCGGCAGCTGCCCGCCTCGGAGGAGGCTCCGCGTGGAGGCGATCAGGACGCAGCGAACG GAGGTGCCCGTCGAGGAGTCCGCCCCCGCCAGGGACGCCGCCGCTGCCGCGCCCCTGGAC GGAAACGGAGCCGGAGCGGACGGCTCCGTGGTTCCTTCCTCGGACGACAGCTGGGTTGTC AAGCTCGAGCAGTCGTTCAACATTTTCGCCACGGATTCGGTGATTATGGTACTCAAGGGC GTGTACGGTGATCGGTACTACGCCAGGTTCTTTGCGCTGGAGACGATTGCGAGGGTGCCG TACTTCGCATTCATATCGGTGCTTCACTTGTATGCGACCTTTGGATGGTGGAGACGAGCT GATTACATAAAGGTTCACTTTGCGCAGAGCTGGAACGAGTTCCATCACCTCTTGATCATG GAAGAATTGGGTGGCGACTCTTTGTGGTTTGACTGTTTTCTTGCTCGGTTTATGGCATTC TTTTACTACTTCATGACTGTTGCAATGTACATGCTGAGCCCACGAATGGCATATCACTTT TCCGAATGTGTGGAGAGACATGCATATTCCACCTATGATGAGTTCCTCAAGCTCCATGAA GATGAGTTTCAGGCATCAAGAACTCCAGGTTCTAGGAGGCCTAAAATAGATAACTTATAC GATGTATTCGTTAATATACGAGAAGATGAGGCAGAGCACTGCAAGACAATGAAGACCTGT CAAACACATGGAAATCTTCGTTCTCCTCATTCAACGCCGAACTGCTTAGAAGATGATACG GAATGTGTAATACCTGAAAACGACTGTGAAGGTGTCGTAGTATACAAAGTATAA

Peptide Sequence

PEP ID	Zm00001d001908_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:2689185:2697141:1 gene:Zm00001d001908 transcript:Zm00001d001908_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alternative oxidase
Sequence	MVVRRLGGTGRALLTLPNIRRRASNSWAAVCDTFFSTKQVFESHRIVFTVGTSIASVLTA WAGYSLRHVQQLKIERRLESIESSVRVRLARRCLVRSKGLQKRAAKADDGSHEVVTEQVA LAALQQAQEQQHCRAEPEAELGSCPPRRRLRVEAIRTQRTEVPVEESAPARDAAAAAPLD GNGAGADGSVVPSSDDSWVVKLEQSFNIFATDSVIMVLKGVYGDRYYARFFALETIARVP YFAFISVLHLYATFGWWRRADYIKVHFAQSWNEFHHLLIMEELGGDSLWFDCFLARFMAF FYYFMTVAMYMLSPRMAYHFSECVERHAYSTYDEFLKLHEDEFQASRTPGSRRPKIDNLY DVFVNIREDEAEHCKTMKTCQTHGNLRSPHSTPNCLEDDTECVIPENDCEGVVVYKV

Transcript Sequence

Transcript ID	Zm00001d001908_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:2689185:2697141:1 gene:Zm00001d001908 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alternative oxidase
Sequence	ACTTGCGAACGACGCTTCAAATTTCAAAAATACCAATTCTTCTTCTTTTTTTCTTGTACT CCGTCGTACCTACCTTTTTGCCCATTTCACGAGGCTCCGCTCGGCGCTCCTGACACCATC GGCCATCGCGCTTCGCGCCCGCAACTGCTCGACCGAGCCGGGACCGGGCGGCGCCCGTTC GTTGCGTATCCCGCAAGTTGGCCGGCCTCCCTCCGCCTTGGGAGGGGAAAGCGGAGGAGG AAGAGGGAGCCAAGCGGTCAAGCCGGCTCGGCCGATCGCCTCCCACCAAAATACCCCCGA ATCCCCATCCCCAAGCAACACCCAGAAAAGGCGACAAGTGCCGAGGTCTGGGGAGCGATG GTTGTGCGGCGGCTGGGCGGCACGGGGCGCGCGCTGCTCACGCTCCCCAACATCCGGAGG CGGGCGTCCAACTCCTGGGCCGCCGTCTGCGACACCTTCTTCTCCACCAAGCAAGTGTTC GAGAGCCACCGCATCGTCTTCACCGTCGGCACCTCAATCGCCTCCGTCCTCACGGCTTGG GCCGGTTATTCACTTCGCCATGTGCAACAATTAAAGATTGAAAGGAGGCTTGAGTCAATT GAATCATCTGTACGCGTTAGGCTGGCGAGGCGGTGCTTGGTACGCTCGAAGGGCCTTCAG AAGAGAGCAGCAAAAGCTGATGATGGGTCACATGAAGTCGTCACAGAACAGGTGGCACTG GCGGCCCTTCAACAGGCTCAGGAACAGCAGCACTGCCGTGCCGAGCCGGAGGCCGAGCTC GGCAGCTGCCCGCCTCGGAGGAGGCTCCGCGTGGAGGCGATCAGGACGCAGCGAACGGAG GTGCCCGTCGAGGAGTCCGCCCCCGCCAGGGACGCCGCCGCTGCCGCGCCCCTGGACGGA AACGGAGCCGGAGCGGACGGCTCCGTGGTTCCTTCCTCGGACGACAGCTGGGTTGTCAAG CTCGAGCAGTCGTTCAACATTTTCGCCACGGATTCGGTGATTATGGTACTCAAGGGCGTG TACGGTGATCGGTACTACGCCAGGTTCTTTGCGCTGGAGACGATTGCGAGGGTGCCGTAC TTCGCATTCATATCGGTGCTTCACTTGTATGCGACCTTTGGATGGTGGAGACGAGCTGAT TACATAAAGGTTCACTTTGCGCAGAGCTGGAACGAGTTCCATCACCTCTTGATCATGGAA GAATTGGGTGGCGACTCTTTGTGGTTTGACTGTTTTCTTGCTCGGTTTATGGCATTCTTT TACTACTTCATGACTGTTGCAATGTACATGCTGAGCCCACGAATGGCATATCACTTTTCC GAATGTGTGGAGAGACATGCATATTCCACCTATGATGAGTTCCTCAAGCTCCATGAAGAT GAGTTTCAGGCATCAAGAACTCCAGGTTCTAGGAGGCCTAAAATAGATAACTTATACGAT GTATTCGTTAATATACGAGAAGATGAGGCAGAGCACTGCAAGACAATGAAGACCTGTCAA ACACATGGAAATCTTCGTTCTCCTCATTCAACGCCGAACTGCTTAGAAGATGATACGGAA TGTGTAATACCTGAAAACGACTGTGAAGGTGTCGTAGTATACAAAGTATAA