Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d001861_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:2048657:2050638:1 gene:Zm00001d001861 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR domain containing protein

Sequence

ATGGCGATGGCGATGCCGATGGCAGTGGCGCGGGTGACCAGCCTCGCCTGCGCCCCCCGA
CAGGCGCAGCATCGCCGCCGCCATAGCCTTGCCCCGCCGTGCGCCTCGGGTGCGGTGGAG
GTGCGGGTCTGCACGAACCGCACGTGCGCGCGGCAGGGTGGGCGCGAGGTCCTGGCTGCG
CTCGCGGGACTCGCGCCGCCGGCGGTCGACGTGGCCTCCTGCGGGTGCCTCGGGCGCTGC
GGCGCCGGGCCCAACGTTGCGGCGTCCGTCCCTGGGAGCGCCGCGGTGTTCGGCCACGTG
GGCACGGCGGCGCGAGGCGCGCAGCTACTGGAGCACCTCCTCGGCCCCGCGGAATTCGAT
GCGGCCCTAGGGCTCACCGCGCTGGCCACGAGGGAGAAGGCGGAGGCTGCCCTCGAGAAG
GGAAACGCGGACGAAGCGGAAGCCCTTCTCACCGAGGTTATTGGGTTCAATGCTTGTGGT
GGTCTGCATTTGGTGTACATGAGCAGGTCTAAGGCGAGATTGGAAATTGGGGATATCCCT
GGTGCACTTGGGGATGCTGAGGAAGCAATAAGAATAGCTCCCAGATTTCCTCAGGCTCAC
TTATTGCGAGGCGACGCACTTTTTGCAATGGGTGAATATTCTGTCGCGGAAGATGCCTAT
GCAGATGCCTTGGATCTTGATCCATCTATTCGCCGGTCCAAGTCTTTCAGGGCTCGCGTG
GAAAGGCTACGAGAGAAGCTTGTTAGTGCCAATAATCCGTAG

Peptide Sequence

PEP ID

Zm00001d001861_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:2048657:2050638:1 gene:Zm00001d001861 transcript:Zm00001d001861_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR domain containing protein

Sequence

MAMAMPMAVARVTSLACAPRQAQHRRRHSLAPPCASGAVEVRVCTNRTCARQGGREVLAA
LAGLAPPAVDVASCGCLGRCGAGPNVAASVPGSAAVFGHVGTAARGAQLLEHLLGPAEFD
AALGLTALATREKAEAALEKGNADEAEALLTEVIGFNACGGLHLVYMSRSKARLEIGDIP
GALGDAEEAIRIAPRFPQAHLLRGDALFAMGEYSVAEDAYADALDLDPSIRRSKSFRARV
ERLREKLVSANNP

Transcript Sequence

Transcript ID

Zm00001d001861_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:2048657:2050638:1 gene:Zm00001d001861 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR domain containing protein

Sequence

ATCCACAGAAAAAAAGCGCCCCGCCTCATCCCGAGATCAGAATCAGAGGCCACGCGGCGA
TGGCGATGGCGATGCCGATGGCAGTGGCGCGGGTGACCAGCCTCGCCTGCGCCCCCCGAC
AGGCGCAGCATCGCCGCCGCCATAGCCTTGCCCCGCCGTGCGCCTCGGGTGCGGTGGAGG
TGCGGGTCTGCACGAACCGCACGTGCGCGCGGCAGGGTGGGCGCGAGGTCCTGGCTGCGC
TCGCGGGACTCGCGCCGCCGGCGGTCGACGTGGCCTCCTGCGGGTGCCTCGGGCGCTGCG
GCGCCGGGCCCAACGTTGCGGCGTCCGTCCCTGGGAGCGCCGCGGTGTTCGGCCACGTGG
GCACGGCGGCGCGAGGCGCGCAGCTACTGGAGCACCTCCTCGGCCCCGCGGAATTCGATG
CGGCCCTAGGGCTCACCGCGCTGGCCACGAGGGAGAAGGCGGAGGCTGCCCTCGAGAAGG
GAAACGCGGACGAAGCGGAAGCCCTTCTCACCGAGGTTATTGGGTTCAATGCTTGTGGTG
GTCTGCATTTGGTGTACATGAGCAGGTCTAAGGCGAGATTGGAAATTGGGGATATCCCTG
GTGCACTTGGGGATGCTGAGGAAGCAATAAGAATAGCTCCCAGATTTCCTCAGGCTCACT
TATTGCGAGGCGACGCACTTTTTGCAATGGGTGAATATTCTGTCGCGGAAGATGCCTATG
CAGATGCCTTGGATCTTGATCCATCTATTCGCCGGTCCAAGTCTTTCAGGGCTCGCGTGG
AAAGGCTACGAGAGAAGCTTGTTAGTGCCAATAATCCGTAGTTCATTTTGAAGCTCTCTC
TCCATCAGAAGTTCGATCCACAAGTAACGTAGATATGTTCTTGGTGAAGGTAATAATGCT
CACACACTTTGCAAGCCACTGGTCAGGAATTGATTGTTGCCACAGCTTGGAGGATCCAAC
AGTTCATATGAATGTAGGGCACTGTTGTTTTTCCCACCTGAACGGCTGAACTACACTATG
ATCTACAAACTTAGAATAGTCTAGTGTATTTTATTGTATGTTTATGCCCTACAATGTAAG
CTACTGACTTCCAAACCATGCTAGTATGTATTGAGATTTGAGAGTCATTCTCATTTCAGA
AAATTGTATGGCTGCACTCTCTGTTGATATGATCTTGGCATTCTCA