Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d001844_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:1713365:1718096:1 gene:Zm00001d001844 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastid division protein CDP1 chloroplastic
Sequence

ATGGTGATGCCGACTGTGGCCTCCGCGGCCGCAGCGGCGCTTCACCCGGCGATCTCGACG
CGGCGCGCGGGGGTCGTCGGGAACGGCATTGCGTCCGCCGCGGCGGCGGGTGGACGCCTG
GCCGGCGGCGGGCGAGGGGCGGTCGTGCGTGCCAGGGTGGCGGAGGCCGCGCCGGTGGCG
GCCGAGGGCGGCAGGTTGGAGGCGCCTCCCGCTGCACCCATGGTGGAGATCCCCGTCACC
TGCTATCAGATGCTAGGCGTTACCGAGAAGGCTGAGAAAGATGAAATCGTGAAGGCCGCG
ATGGAGTTGAAAAATGCTGGGATAGAAGATGGATACACAGCTGAGGTCTCCACTTTCAGA
CAGGCTCTCCTAGTAGATGTCAGAGATAAACTTCTGTTCGAACAAGATTATGCAGGAAAC
ATAAAAGAGAAGGTTCCACCTAGGTCCTCTCTTCATATACCTTGGAGCTGGTTGCCTGCT
GCTCTGTGTATTTTGCAGGAGGTTGGAGAAGAGAAGCTAGTTTTGGAAATTGGTCAGGCG
GCTCTACGACGCCCTGATTCTAAACCTTATGTTCACGATGTGCTTCTTGCAATGGCATTA
GCAGAATGCTCTATAGCAAAAGCCAGCTTTGAGAAGAGTAAAGTGTCCCTTGGCTTTGAG
GCTCTGGCACGCGCTCAATATCTTTTGAGGAGAAAACCATCTTTGGAGAAGATGCCCATT
CTTGAACAGATTGAAGAATCACTTGAAGAGCTTGCGCCTGCTTGCACATTGGAGCTTCTA
AGCTTGCCTCAGACACTTGAAAATTCTGAACGCAGGCGAGGTGCTATTGCAGCTCTCTGT
GAACTGCTTAGACAGGGCCTTGATGTTGAATCATCTTGTAGAGTCCATGACTGGCCTTGT
TTCTTGGGTCAAGCAATGGACAAACTATTAGCCAATGAAATTGTGGATCTTCTTACTTGG
GATACTTTGGCTACAACTCGTAAAAATAAAAGATCGTTGGAGTCCCAGAGCCAGCGGGTT
GTAGTTGACTTCAATTGCTTTTACATGGCGATGCTTGCTCACCTTGCATTTGGATTTACA
ACCCGCCAGACTGAGTTGATCAAGAAAGCTAAAACCATCTGTGAATGTTTAGTTGCATCT
GAGAGCACAGACCTAAAATTTGAGGAATCTTTCTGCTCATATCTTCTTGGAGAGGAAACT
GGAACCACAGTATTTGAAAAGCTTCAGCAGCTTCAAAGTACTGGAAGTTCAAATTCAAAG
AACTATGGATTGGATAAAAAGAAAGACAGCAGTGGCAAGGTTACTGTCAACCAATCACTG
GAACTGTGGCTGAAGGATGTGGCCCTTTCTCGTTTTGCAGATACAAAAGATTGTCCGCCA
TCTTTGACCAACTTTTTTGGAGCTCCTAAACGTGTCCTTAACACATCCAAGCAGAAACTG
GGATCCCCAAGATCAGTCCTTTTGAGCTCTCAGCCATCTTCTAGTGCTTCATTATGCAAC
AGAACTTCAACAGAACAGAGCCCAAGATTGAGTCCCAACAGCCATCTGGGGGAGGCTGTT
AAGCAACTTGCACCTGCCAACTTGGGGCTCCAATCATCAATGGATAGGCAAGTAAATGGT
TCAGGGACAGCATCTGTTCCCCTGAAGCGCAATCCTGGATCCCATATCAGAACATTGGAA
TTATGGGGACTAAGTGGAGATGTTATGGGAAAGCTTGCATGTAGCGCACTCCTTGGCTTT
GTTGTATTTAGCACATTAAAATTGACCAGGTTTCAGTTTGGGCATGTGAGATACACGGAC
CCAAGTAGAGAGTCTGCATCCATGTTGTCCTTGAATGAAGCGTCTGCAAAAGAAGGCTCT
TTTATCACCAGTCGTGTCAGGAAGCATTTTGAAAATATATCAAAATTTCTTTGGCTGAGT
GATAGGCCTAATTCAAATAGCAAAGGAAGTGATAAACACCCAGCGGTTAATGATATTACT
GCTGCAGTTTGCAAGCAAAAGATGGATATTCAAGAAGCAGAAACACTTGTAAAACAGTGG
CAAGACATAAAATCTGAAGCTCTTGGCCCTGACTATCAAACTGACATGCTACCTGAGATT
CTTGATGGTTCAATGCTCTCTAAGTGGGAAGACTTAGCGTTATTAGCAAAGGACCAGTCT
TGCTATTGGAGATTTGTGCTGCTAAATCTTAATGTTGTTCGAGCCGAGATAATCTTGGAT
GAAATAGGTGCTGGTGAGGCAGCAGAAATTGATGCTGTACTTGAGGAAGCGGCTGAGCTT
GTTGACGATTCCCAGCCCAAGAAACCGAGTTATTACAGCACATATGAAGTTCAGTACGTA
TTGAGGAGGCAGAATGATGGATCTTGGAAAATCTCCGAGGCTGCTGTCCGGGACCTGACG
TGA

Peptide Sequence

PEP ID

Zm00001d001844_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:1713365:1718096:1 gene:Zm00001d001844 transcript:Zm00001d001844_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastid division protein CDP1 chloroplastic
Sequence

MVMPTVASAAAAALHPAISTRRAGVVGNGIASAAAAGGRLAGGGRGAVVRARVAEAAPVA
AEGGRLEAPPAAPMVEIPVTCYQMLGVTEKAEKDEIVKAAMELKNAGIEDGYTAEVSTFR
QALLVDVRDKLLFEQDYAGNIKEKVPPRSSLHIPWSWLPAALCILQEVGEEKLVLEIGQA
ALRRPDSKPYVHDVLLAMALAECSIAKASFEKSKVSLGFEALARAQYLLRRKPSLEKMPI
LEQIEESLEELAPACTLELLSLPQTLENSERRRGAIAALCELLRQGLDVESSCRVHDWPC
FLGQAMDKLLANEIVDLLTWDTLATTRKNKRSLESQSQRVVVDFNCFYMAMLAHLAFGFT
TRQTELIKKAKTICECLVASESTDLKFEESFCSYLLGEETGTTVFEKLQQLQSTGSSNSK
NYGLDKKKDSSGKVTVNQSLELWLKDVALSRFADTKDCPPSLTNFFGAPKRVLNTSKQKL
GSPRSVLLSSQPSSSASLCNRTSTEQSPRLSPNSHLGEAVKQLAPANLGLQSSMDRQVNG
SGTASVPLKRNPGSHIRTLELWGLSGDVMGKLACSALLGFVVFSTLKLTRFQFGHVRYTD
PSRESASMLSLNEASAKEGSFITSRVRKHFENISKFLWLSDRPNSNSKGSDKHPAVNDIT
AAVCKQKMDIQEAETLVKQWQDIKSEALGPDYQTDMLPEILDGSMLSKWEDLALLAKDQS
CYWRFVLLNLNVVRAEIILDEIGAGEAAEIDAVLEEAAELVDDSQPKKPSYYSTYEVQYV
LRRQNDGSWKISEAAVRDLT

Transcript Sequence

Transcript ID

Zm00001d001844_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:1713365:1718096:1 gene:Zm00001d001844 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastid division protein CDP1 chloroplastic
Sequence

ATCACGACGCCTCCTCCCTCCCTCCTCTCCTCTTCACTGACGCTTTCTCCCTCCCGTCCT
TGCTTTATTCCACCCCCGCAAAAACCCCCGACACCCCGAAAAGCTCACCCCGCACATGGA
GAGCTCCGTCTAGGGTTGGTTCCCGGGAGCGCGTCCATGGTGATGCCGACTGTGGCCTCC
GCGGCCGCAGCGGCGCTTCACCCGGCGATCTCGACGCGGCGCGCGGGGGTCGTCGGGAAC
GGCATTGCGTCCGCCGCGGCGGCGGGTGGACGCCTGGCCGGCGGCGGGCGAGGGGCGGTC
GTGCGTGCCAGGGTGGCGGAGGCCGCGCCGGTGGCGGCCGAGGGCGGCAGGTTGGAGGCG
CCTCCCGCTGCACCCATGGTGGAGATCCCCGTCACCTGCTATCAGATGCTAGGCGTTACC
GAGAAGGCTGAGAAAGATGAAATCGTGAAGGCCGCGATGGAGTTGAAAAATGCTGGGATA
GAAGATGGATACACAGCTGAGGTCTCCACTTTCAGACAGGCTCTCCTAGTAGATGTCAGA
GATAAACTTCTGTTCGAACAAGATTATGCAGGAAACATAAAAGAGAAGGTTCCACCTAGG
TCCTCTCTTCATATACCTTGGAGCTGGTTGCCTGCTGCTCTGTGTATTTTGCAGGAGGTT
GGAGAAGAGAAGCTAGTTTTGGAAATTGGTCAGGCGGCTCTACGACGCCCTGATTCTAAA
CCTTATGTTCACGATGTGCTTCTTGCAATGGCATTAGCAGAATGCTCTATAGCAAAAGCC
AGCTTTGAGAAGAGTAAAGTGTCCCTTGGCTTTGAGGCTCTGGCACGCGCTCAATATCTT
TTGAGGAGAAAACCATCTTTGGAGAAGATGCCCATTCTTGAACAGATTGAAGAATCACTT
GAAGAGCTTGCGCCTGCTTGCACATTGGAGCTTCTAAGCTTGCCTCAGACACTTGAAAAT
TCTGAACGCAGGCGAGGTGCTATTGCAGCTCTCTGTGAACTGCTTAGACAGGGCCTTGAT
GTTGAATCATCTTGTAGAGTCCATGACTGGCCTTGTTTCTTGGGTCAAGCAATGGACAAA
CTATTAGCCAATGAAATTGTGGATCTTCTTACTTGGGATACTTTGGCTACAACTCGTAAA
AATAAAAGATCGTTGGAGTCCCAGAGCCAGCGGGTTGTAGTTGACTTCAATTGCTTTTAC
ATGGCGATGCTTGCTCACCTTGCATTTGGATTTACAACCCGCCAGACTGAGTTGATCAAG
AAAGCTAAAACCATCTGTGAATGTTTAGTTGCATCTGAGAGCACAGACCTAAAATTTGAG
GAATCTTTCTGCTCATATCTTCTTGGAGAGGAAACTGGAACCACAGTATTTGAAAAGCTT
CAGCAGCTTCAAAGTACTGGAAGTTCAAATTCAAAGAACTATGGATTGGATAAAAAGAAA
GACAGCAGTGGCAAGGTTACTGTCAACCAATCACTGGAACTGTGGCTGAAGGATGTGGCC
CTTTCTCGTTTTGCAGATACAAAAGATTGTCCGCCATCTTTGACCAACTTTTTTGGAGCT
CCTAAACGTGTCCTTAACACATCCAAGCAGAAACTGGGATCCCCAAGATCAGTCCTTTTG
AGCTCTCAGCCATCTTCTAGTGCTTCATTATGCAACAGAACTTCAACAGAACAGAGCCCA
AGATTGAGTCCCAACAGCCATCTGGGGGAGGCTGTTAAGCAACTTGCACCTGCCAACTTG
GGGCTCCAATCATCAATGGATAGGCAAGTAAATGGTTCAGGGACAGCATCTGTTCCCCTG
AAGCGCAATCCTGGATCCCATATCAGAACATTGGAATTATGGGGACTAAGTGGAGATGTT
ATGGGAAAGCTTGCATGTAGCGCACTCCTTGGCTTTGTTGTATTTAGCACATTAAAATTG
ACCAGGTTTCAGTTTGGGCATGTGAGATACACGGACCCAAGTAGAGAGTCTGCATCCATG
TTGTCCTTGAATGAAGCGTCTGCAAAAGAAGGCTCTTTTATCACCAGTCGTGTCAGGAAG
CATTTTGAAAATATATCAAAATTTCTTTGGCTGAGTGATAGGCCTAATTCAAATAGCAAA
GGAAGTGATAAACACCCAGCGGTTAATGATATTACTGCTGCAGTTTGCAAGCAAAAGATG
GATATTCAAGAAGCAGAAACACTTGTAAAACAGTGGCAAGACATAAAATCTGAAGCTCTT
GGCCCTGACTATCAAACTGACATGCTACCTGAGATTCTTGATGGTTCAATGCTCTCTAAG
TGGGAAGACTTAGCGTTATTAGCAAAGGACCAGTCTTGCTATTGGAGATTTGTGCTGCTA
AATCTTAATGTTGTTCGAGCCGAGATAATCTTGGATGAAATAGGTGCTGGTGAGGCAGCA
GAAATTGATGCTGTACTTGAGGAAGCGGCTGAGCTTGTTGACGATTCCCAGCCCAAGAAA
CCGAGTTATTACAGCACATATGAAGTTCAGTACGTATTGAGGAGGCAGAATGATGGATCT
TGGAAAATCTCCGAGGCTGCTGTCCGGGACCTGACGTGATTTCGGCCAACTCGGCAAACG
GGCTACACAACCATTGGCGTATAGGCGGCATGGCAATCTTAACCTATTAGGAATGTGTAG
TGGCACTATTAGGTTACCTGCAGTTCAATTTGAGTTCTTTGCATTAGTTAGCTGAGCTCC
GTTGGGATGCTTTGAGGTCTTGAGCTGCTCTCATGGTGAGCTTGGCCCTTTGGATTCAGG
ATTTGACACAATAGTTGCTGGCAGTACAGATGCTAACCAGTGCTGATTCCACATTCTTCC
TTTTCCGATATGATGTGAATTATGTTATCTAGTTTTTGAGTTTTACCCACGTGTAATTGA
AATCCGTGACCGCCATTGTTCAAAGAACAATGCAATTTGCTGAATTGATGTTTGCGTTTC
ACGGC