Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d001828_T035
CDS Infomation	cds chromosome:B73_RefGen_v4:2:1549863:1557033:1 gene:Zm00001d001828 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p80 WD40 repeat-containing subunit B1 homolog
Sequence	ATGTCAGTTGATTTTCATCCGTTTGGGGAATTCTTTGCCTCTGGGTCACTGGACACTAAT CTGAAGATATGGGATATAAGAAGGAAGAATTGCATCCATACATACAAAGGTCACACACGA GGGGTGAACACTATTAGATTTACACCCGATGGGCGGTGGGTTGTGTCTGGTGGCGAAGAT AATATAGTAAAGCTCTGGGATCTGACAGCTGGAAAGTTATTACATGAATTCAAGTGTCAT GAGGGTCAGATCCAGTGCATAGATTTCCACCCCCACGAGTTCCTTCTGGCAACAGGTTCA GCTGATAAAACTGTCAAATTCTGGGATTTGGAGACATTTGAATTGATTGGATCTACAGGA CCTGAGACAACAGGTGTCCGATCCATGACATTCAATCCTGATGGAAGATCTTTGTTATGT GGGCTGCACGAAAGCTTAAAGGTTTTCTCTTGGGAGCCAATAAGATGCCATGATACTGTG GACGTGGGATGGTCTAGACTTGCCGATTTGAATGTCCATGAGGGAAAACTTCTTGGTTGT TCTTTCAATCAAAGTTGTGTTGGAATATGGGTTGTTGATCTGACGCGTCTTGAGCCATAT ACAATGGGTACTTCAACAAAAGTAAATGGTCATTCTGAATTGAAGACTGTTTCTAGCGGC ACTTTGCCTTTACAAAATGATAGTGGTTCAAGGGCTAACATAGGGCGATCATCAGTCTTG CAAAATACAGAGAACAACCTTAAAACTACTTCAGGAAGACTGTCGGCTTCACAGAACTCA GATTCTGCACCCAAAGAAACTAACTCGGCACCTTCAAGCGGGTTGATCCCAAGCACACCA CATAGGGCTGGAGTTGGCTCCCATAATAGATCTGTTGGAAATTCAGCTTTTCAATCTGGT GGTACCACCTTGAAGAGAAGTTCGTTGAGGAATAACAGTGCCTCTAATGTTCACAATTTC AGTAAAGCTGATGTAGTGCCTGTCATTGTTCCCAGAACTAGCTCAGGAGGGGAGTTGGCT ACTGATTCTAGAAGCGATGCTGCTGATGTGGCACCCGTTCTTCCGAAGGTAACCAGAAGG GTTGAACCTGCTACCGATTCTAGAAAAGAAAGTAATGATGTGGAACTTGTTGTTCCTAGA GCAAGCTCAAGAATGGAAATAGCCGATTTAGCACCCATTTCTAGTTCCAAGTCAGGCAGA AGGTTGGAGTCTGCCCCTGATTCGAAAGAAGAAAGTGCTGATACAGCACCTGTTGTTGTT TCCAATCCCAGGGCTAATGTAAGAATGGAAATAGTCTCTGATTCTGCGCCCGCTCTTTCA AAGTCAAACAGAAAGCTAGATTCTGGCACTAACTCAAAGAAAGAAAGTGCTGATGCAGTC ATTGTACCCAGAACAAATTCTAGAATGGAAATGATTTCTGATTCTAGGAGAGAACCCTCT GCTGGAAGAATATCACCATTCAGAATCCAGTCAAGATATGCTGAGCCACGGAAGCTAGCC CATGCCAGAACTGATTCAAACAAAGTTGATAGCAGAAGTAAAATTACTGAAACAGAAGAC TTCAATTGCCAAATATTTCTTCCCCGTAGAAACAGTGTTTTTCAAACAATAAGTTCTGAA GAACCTCGTGAAGATGTAAAGTGTGGTCCAGTTGACAGGGTGGGATTTTCAAATTCATCA GAACCAAATGCGAGTGTCCGCAATGAGAATTATGTTCCTAGAATGCGCAAACCAGGAGAC AACTGCTATATCGAAGTTTCAAGAGCAGGAAGAGCAAGGTCAAGTGTCTCTAATTGGGAA GGGAGGGATCAGCCCCCTAGTCATGAAGAACCAACAACAAGCAGTTCTACACTGGCTCCT ACCGGCCATCCATATTCATCTAGAGGAAGCAATCAAGCTTCTGAAGCTCCAATCATAGCT AGTGATGAAGATGTTCTATCTCTTATCATGGAGCGACATGATCTATTTTTAAGCTCAACT AAGTCTCGGCTGATGAAATTGCAGATTATTCATCAAATGTGGGAAAGAAATGACATCAGG GGTGTGCTCTCTGCGATGGACAGGATGGGTGATCATGCTGTCTGTGCTGATATGGCTAGC GTTCTCATGGAGAAAAGTGAAACAATCACACTAGATTTATGTACCTCTATCCTGCCTGTC GTCACCGATCTTCTGGAGAGCAAAATTGACAGACACTTAGTCGTCGCATTGGAATTGTTG GTGAAGCTTGTAAGGACTTTTGGTCCAATGATACATTCAACAGTATCGTCAGGTCCTTGT GTTGGTGTAGACCTTGAGGCAGAGCAAAGGAGGGAGCGCTGCAACTTATGCTTCATCGAA TTGGAGAAGGCCAAAAATAAGCTTCCATCTCTAACAAGAAGAAAAGGGGCGGTTGCAAAT GCTGCACAAGAACTTGCTCTTGTCTTCCAGGAAATCATGAGTTGA

Peptide Sequence

PEP ID	Zm00001d001828_P035
PEP Infomation	pep chromosome:B73_RefGen_v4:2:1549863:1557033:1 gene:Zm00001d001828 transcript:Zm00001d001828_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p80 WD40 repeat-containing subunit B1 homolog
Sequence	MSVDFHPFGEFFASGSLDTNLKIWDIRRKNCIHTYKGHTRGVNTIRFTPDGRWVVSGGED NIVKLWDLTAGKLLHEFKCHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSTG PETTGVRSMTFNPDGRSLLCGLHESLKVFSWEPIRCHDTVDVGWSRLADLNVHEGKLLGC SFNQSCVGIWVVDLTRLEPYTMGTSTKVNGHSELKTVSSGTLPLQNDSGSRANIGRSSVL QNTENNLKTTSGRLSASQNSDSAPKETNSAPSSGLIPSTPHRAGVGSHNRSVGNSAFQSG GTTLKRSSLRNNSASNVHNFSKADVVPVIVPRTSSGGELATDSRSDAADVAPVLPKVTRR VEPATDSRKESNDVELVVPRASSRMEIADLAPISSSKSGRRLESAPDSKEESADTAPVVV SNPRANVRMEIVSDSAPALSKSNRKLDSGTNSKKESADAVIVPRTNSRMEMISDSRREPS AGRISPFRIQSRYAEPRKLAHARTDSNKVDSRSKITETEDFNCQIFLPRRNSVFQTISSE EPREDVKCGPVDRVGFSNSSEPNASVRNENYVPRMRKPGDNCYIEVSRAGRARSSVSNWE GRDQPPSHEEPTTSSSTLAPTGHPYSSRGSNQASEAPIIASDEDVLSLIMERHDLFLSST KSRLMKLQIIHQMWERNDIRGVLSAMDRMGDHAVCADMASVLMEKSETITLDLCTSILPV VTDLLESKIDRHLVVALELLVKLVRTFGPMIHSTVSSGPCVGVDLEAEQRRERCNLCFIE LEKAKNKLPSLTRRKGAVANAAQELALVFQEIMS

Transcript Sequence

Transcript ID	Zm00001d001828_T035
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:1549863:1557033:1 gene:Zm00001d001828 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p80 WD40 repeat-containing subunit B1 homolog
Sequence	GAGCTTATCAGGTCACACAAGTGCTGTGGAGTCGGTTGGTTTTGATTCCACGGAAGTGTT TGTGGCTGCAGGAGCAGCCAGTGGAACAATAAAGCTATGGGATTTGGAGGAGGCAAAGAT TGTCCGCACTCTTACTGGACATAGATCAAACTGCATGTCAGTTGATTTTCATCCGTTTGG GGAATTCTTTGCCTCTGGGTCACTGGACACTAATCTGAAGATATGGGATATAAGAAGGAA GAATTGCATCCATACATACAAAGGTCACACACGAGGGGTGAACACTATTAGATTTACACC CGATGGGCGGTGGGTTGTGTCTGGTGGCGAAGATAATATAGTAAAGCTCTGGGATCTGAC AGCTGGAAAGTTATTACATGAATTCAAGTGTCATGAGGGTCAGATCCAGTGCATAGATTT CCACCCCCACGAGTTCCTTCTGGCAACAGGTTCAGCTGATAAAACTGTCAAATTCTGGGA TTTGGAGACATTTGAATTGATTGGATCTACAGGACCTGAGACAACAGGTGTCCGATCCAT GACATTCAATCCTGATGGAAGATCTTTGTTATGTGGGCTGCACGAAAGCTTAAAGGTTTT CTCTTGGGAGCCAATAAGATGCCATGATACTGTGGACGTGGGATGGTCTAGACTTGCCGA TTTGAATGTCCATGAGGGAAAACTTCTTGGTTGTTCTTTCAATCAAAGTTGTGTTGGAAT ATGGGTTGTTGATCTGACGCGTCTTGAGCCATATACAATGGGTACTTCAACAAAAGTAAA TGGTCATTCTGAATTGAAGACTGTTTCTAGCGGCACTTTGCCTTTACAAAATGATAGTGG TTCAAGGGCTAACATAGGGCGATCATCAGTCTTGCAAAATACAGAGAACAACCTTAAAAC TACTTCAGGAAGACTGTCGGCTTCACAGAACTCAGATTCTGCACCCAAAGAAACTAACTC GGCACCTTCAAGCGGGTTGATCCCAAGCACACCACATAGGGCTGGAGTTGGCTCCCATAA TAGATCTGTTGGAAATTCAGCTTTTCAATCTGGTGGTACCACCTTGAAGAGAAGTTCGTT GAGGAATAACAGTGCCTCTAATGTTCACAATTTCAGTAAAGCTGATGTAGTGCCTGTCAT TGTTCCCAGAACTAGCTCAGGAGGGGAGTTGGCTACTGATTCTAGAAGCGATGCTGCTGA TGTGGCACCCGTTCTTCCGAAGGTAACCAGAAGGGTTGAACCTGCTACCGATTCTAGAAA AGAAAGTAATGATGTGGAACTTGTTGTTCCTAGAGCAAGCTCAAGAATGGAAATAGCCGA TTTAGCACCCATTTCTAGTTCCAAGTCAGGCAGAAGGTTGGAGTCTGCCCCTGATTCGAA AGAAGAAAGTGCTGATACAGCACCTGTTGTTGTTTCCAATCCCAGGGCTAATGTAAGAAT GGAAATAGTCTCTGATTCTGCGCCCGCTCTTTCAAAGTCAAACAGAAAGCTAGATTCTGG CACTAACTCAAAGAAAGAAAGTGCTGATGCAGTCATTGTACCCAGAACAAATTCTAGAAT GGAAATGATTTCTGATTCTAGGAGAGAACCCTCTGCTGGAAGAATATCACCATTCAGAAT CCAGTCAAGATATGCTGAGCCACGGAAGCTAGCCCATGCCAGAACTGATTCAAACAAAGT TGATAGCAGAAGTAAAATTACTGAAACAGAAGACTTCAATTGCCAAATATTTCTTCCCCG TAGAAACAGTGTTTTTCAAACAATAAGTTCTGAAGAACCTCGTGAAGATGTAAAGTGTGG TCCAGTTGACAGGGTGGGATTTTCAAATTCATCAGAACCAAATGCGAGTGTCCGCAATGA GAATTATGTTCCTAGAATGCGCAAACCAGGAGACAACTGCTATATCGAAGTTTCAAGAGC AGGAAGAGCAAGGTCAAGTGTCTCTAATTGGGAAGGGAGGGATCAGCCCCCTAGTCATGA AGAACCAACAACAAGCAGTTCTACACTGGCTCCTACCGGCCATCCATATTCATCTAGAGG AAGCAATCAAGCTTCTGAAGCTCCAATCATAGCTAGTGATGAAGATGTTCTATCTCTTAT CATGGAGCGACATGATCTATTTTTAAGCTCAACTAAGTCTCGGCTGATGAAATTGCAGAT TATTCATCAAATGTGGGAAAGAAATGACATCAGGGGTGTGCTCTCTGCGATGGACAGGAT GGGTGATCATGCTGTCTGTGCTGATATGGCTAGCGTTCTCATGGAGAAAAGTGAAACAAT CACACTAGATTTATGTACCTCTATCCTGCCTGTCGTCACCGATCTTCTGGAGAGCAAAAT TGACAGACACTTAGTCGTCGCATTGGAATTGTTGGTGAAGCTTGTAAGGACTTTTGGTCC AATGATACATTCAACAGTATCGTCAGGTCCTTGTGTTGGTGTAGACCTTGAGGCAGAGCA AAGGAGGGAGCGCTGCAACTTATGCTTCATCGAATTGGAGAAGGCCAAAAATAAGCTTCC ATCTCTAACAAGAAGAAAAGGGGCGGTTGCAAATGCTGCACAAGAACTTGCTCTTGTCTT CCAGGAAATCATGAGTTGACTGACGACACACTAGATATACACAATTAGATGGGACATGCT TCGGCCTCTGATGGCAACAAGATTGGATATCAGCTGCCATGGAGGGTGCTAGCTATTCAG TCTTAGCGACGTCATCAAGCTCCAAGGCCACAGCACCAACAAATGCATTTTGTTGCTGCT GTTCGTGCCTTTTGTACACATGCTAACACATAATCCATGTCATTTGTGAAGAGAAGCTGC CATGGACAGTGACTTCATCCACAATATTATGTGGATGGCGGCAGCTGGAGATGTTAGGCC CCGATCGAATGGTGATCAGCAGATGAGACTTGCTTGGGCTTTTCTGGCACTCGTAGTTCT TTGCTGTCTGTAACATCTTTCTCATGTACCGTTATCATGTGCATGTGCAACAGTCAAGTG GTTGCATTTGGTAGTTTATGGTTGTGCTGTGTGTTGGTCGATTTAGTGGTCGTTGATGAG TGAAGCGAGCCATGTACATCATTTTTTTTTAAGATTTGATATCTTCTTTT