Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d001827_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:2:1539714:1544952:1 gene:Zm00001d001827 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation elongation factor EF1A/initiation factor IF2gamma family protein
Sequence	ATGTCTGATTTTGAGGAGCCCTTTAAAATTTCTGGGATGTGGCAATGCTCCATTTGCACG CATGAAAATACTACATATAGTTCATCTTGTGAGCTATGTGGTGTGCTTCATGATCTCTCA CTGTATTTCAATGATATCAGTGAAGACGAAGATGGAGCTAAATGCAGACACAAGTATTCT GGAGTATCCATCCTTGCAAGATCTCTTTTTACACCACCTAGTGCAAAGTCAAAGGCTATT GTTTTCTCTCATGATTTCAAAGACAGAAGAAATACAACAGGGAATAAGCAAGCTACAATG GATGCTCTACATAAGACATTCATGACTCGCAAAAAGCGCCACATTAACATAGTTGACACA GAGGTTCTAGTTAAGGATTCTGTTGGCGTGACTGGAAAGGAGATGATGAATAATGATATT CTTCTAACTGAAAAGAATACAAGCATGGACCCAAGTGCATTAGTACAGTTGGATGATGGT GGAACTAGTAGCAATGTTCCTTCGAGTAGTCAAAATATAACTCTTGCTTTGGACCATGAG CTACAACATTTGAGTTTGGAGAGCAAACTGAAGAACAGTAAAACGAATGTTAAGAAAACA GCTTCTGTTTCTCACTACAAGCCAGAACCTTGGATGCTCCAGAGTGAAAATCAAGAAATC CGTAATCAGCTAAGTCTTGCCATTGTTGGTCATGTTGATTCTGGGAAATCAACTTTATGT GGTCGATTGCGACATGCTCTGGGATTGATTTCAAAAAAGCAAATGCATAAATATGAGAAA GAAGCTAAAGAAAAGGGAAAAGGGTCATTTGCATATGCCTGGGCTATGGATGAGAGCAGT GATGAGAGGGAGCGTGGCATTACGATGACTGTGGCTGTAGCATACTTTAATAGCGAGAAA TACCGTGTGGTTCTGCTTGACTCCCCTGGTCACAAGGATTTTGTGCCTAATATGATATCT GGTGCTACACAAGCTGATGCCGCCATCCTAGTTGTTGATGCATCTATAGGGTCATTTGAA GCAGGCATGGGTGTCAATGGGATTGGTCAGACGAAGGAGCACTCGCAGCTTGTTAGGAGC TTTGGTGTTGAGAACTTGATAGTTGCTGTTAATAAGATGGATGGGGTGGAATATTCGAAG GAGCGGTTTCAGTCCGTTAAATCGCAACTCGGCGTCTTTCTTCGGTCGTGTGGGTACAAG GACTCTTCAGTCACCTGGGTTCCTTTGAGCGCAATGGCCAACGAAAATTTAGTCACAGCT TGTTCAGACACTCGACTTTTATCTTGGTACAATGGAGGCTGTCTGCTGCAAGCCATCGAC TCGTTACCTCCTCCCCGTCGCGACGTGTCAAGTCCACTGCGCCTTCCGATATGTGATGTC ATTGCATCTCACACGCTGGGCCAGGTGGCTGTCTGTGGTAAAGTCGAGTCTGGAGGGATC CGAACTGGCTGTAAGGTCCTTGTCATGCCTTCTGGAGACATAGCTACGGTGAAAACCATG GAGCGGGATTCCTCTACCTGCAGCTTGGCTAGAGCCGGGGACAACGTCGCCGTTGGTTTG CACGGGGTGGACCCTGGCCACATCGCGGCAGGCGGAGTTCTCTGCCATCCAGATTTCCCG GTGCGCGTGGCGTGTCACCTGGAGCTGAAAATTCTGGTTCTGGAAATCACCGTGCCAATA CTGGTTGGCCTTGAGTTTGAGCTGCACATACGGCACGCCAAGTCGTCCGCGAGGCTGGTG AGAATACTGTCGTCCCTGGACCAGAAGACCGGCAGGGCCCTGAAGAAAGCGCCGCGTCTG CTCACCGCGAGGCAGGCGGCCCTGGTCGAGGTGAGGCTGGACAGAGAAGCGTGCGTGGAG GAATTCTCGACGCTGAAGGCGCTCGCGCGGGTGTTCCTGCGGTCGCAGGGTAGCACGGTT GCGGTGGGCGTGGTGACTCGAGTCCTGGACCGGGCTTTGGACATGGGCTAG

Peptide Sequence

PEP ID	Zm00001d001827_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:2:1539714:1544952:1 gene:Zm00001d001827 transcript:Zm00001d001827_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation elongation factor EF1A/initiation factor IF2gamma family protein
Sequence	MSDFEEPFKISGMWQCSICTHENTTYSSSCELCGVLHDLSLYFNDISEDEDGAKCRHKYS GVSILARSLFTPPSAKSKAIVFSHDFKDRRNTTGNKQATMDALHKTFMTRKKRHINIVDT EVLVKDSVGVTGKEMMNNDILLTEKNTSMDPSALVQLDDGGTSSNVPSSSQNITLALDHE LQHLSLESKLKNSKTNVKKTASVSHYKPEPWMLQSENQEIRNQLSLAIVGHVDSGKSTLC GRLRHALGLISKKQMHKYEKEAKEKGKGSFAYAWAMDESSDERERGITMTVAVAYFNSEK YRVVLLDSPGHKDFVPNMISGATQADAAILVVDASIGSFEAGMGVNGIGQTKEHSQLVRS FGVENLIVAVNKMDGVEYSKERFQSVKSQLGVFLRSCGYKDSSVTWVPLSAMANENLVTA CSDTRLLSWYNGGCLLQAIDSLPPPRRDVSSPLRLPICDVIASHTLGQVAVCGKVESGGI RTGCKVLVMPSGDIATVKTMERDSSTCSLARAGDNVAVGLHGVDPGHIAAGGVLCHPDFP VRVACHLELKILVLEITVPILVGLEFELHIRHAKSSARLVRILSSLDQKTGRALKKAPRL LTARQAALVEVRLDREACVEEFSTLKALARVFLRSQGSTVAVGVVTRVLDRALDMG

Transcript Sequence

Transcript ID	Zm00001d001827_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:1539714:1544952:1 gene:Zm00001d001827 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation elongation factor EF1A/initiation factor IF2gamma family protein
Sequence	GACGCCCTCTTCGTCGGGGACCTTCGCCGGCGACGAGAATCCAACCTGATAATCCGGAAG ATACATGTGCCAGATGTGTCGATCACAGGGATAGTAAAGCTCTCGAACTGGGTGTAAAGA GATGATAACATGTCTGATTTTGAGGAGCCCTTTAAAATTTCTGGGATGTGGCAATGCTCC ATTTGCACGCATGAAAATACTACATATAGTTCATCTTGTGAGCTATGTGGTGTGCTTCAT GATCTCTCACTGTATTTCAATGATATCAGTGAAGACGAAGATGGAGCTAAATGCAGACAC AAGTATTCTGGAGTATCCATCCTTGCAAGATCTCTTTTTACACCACCTAGTGCAAAGTCA AAGGCTATTGTTTTCTCTCATGATTTCAAAGACAGAAGAAATACAACAGGGAATAAGCAA GCTACAATGGATGCTCTACATAAGACATTCATGACTCGCAAAAAGCGCCACATTAACATA GTTGACACAGAGGTTCTAGTTAAGGATTCTGTTGGCGTGACTGGAAAGGAGATGATGAAT AATGATATTCTTCTAACTGAAAAGAATACAAGCATGGACCCAAGTGCATTAGTACAGTTG GATGATGGTGGAACTAGTAGCAATGTTCCTTCGAGTAGTCAAAATATAACTCTTGCTTTG GACCATGAGCTACAACATTTGAGTTTGGAGAGCAAACTGAAGAACAGTAAAACGAATGTT AAGAAAACAGCTTCTGTTTCTCACTACAAGCCAGAACCTTGGATGCTCCAGAGTGAAAAT CAAGAAATCCGTAATCAGCTAAGTCTTGCCATTGTTGGTCATGTTGATTCTGGGAAATCA ACTTTATGTGGTCGATTGCGACATGCTCTGGGATTGATTTCAAAAAAGCAAATGCATAAA TATGAGAAAGAAGCTAAAGAAAAGGGAAAAGGGTCATTTGCATATGCCTGGGCTATGGAT GAGAGCAGTGATGAGAGGGAGCGTGGCATTACGATGACTGTGGCTGTAGCATACTTTAAT AGCGAGAAATACCGTGTGGTTCTGCTTGACTCCCCTGGTCACAAGGATTTTGTGCCTAAT ATGATATCTGGTGCTACACAAGCTGATGCCGCCATCCTAGTTGTTGATGCATCTATAGGG TCATTTGAAGCAGGCATGGGTGTCAATGGGATTGGTCAGACGAAGGAGCACTCGCAGCTT GTTAGGAGCTTTGGTGTTGAGAACTTGATAGTTGCTGTTAATAAGATGGATGGGGTGGAA TATTCGAAGGAGCGGTTTCAGTCCGTTAAATCGCAACTCGGCGTCTTTCTTCGGTCGTGT GGGTACAAGGACTCTTCAGTCACCTGGGTTCCTTTGAGCGCAATGGCCAACGAAAATTTA GTCACAGCTTGTTCAGACACTCGACTTTTATCTTGGTACAATGGAGGCTGTCTGCTGCAA GCCATCGACTCGTTACCTCCTCCCCGTCGCGACGTGTCAAGTCCACTGCGCCTTCCGATA TGTGATGTCATTGCATCTCACACGCTGGGCCAGGTGGCTGTCTGTGGTAAAGTCGAGTCT GGAGGGATCCGAACTGGCTGTAAGGTCCTTGTCATGCCTTCTGGAGACATAGCTACGGTG AAAACCATGGAGCGGGATTCCTCTACCTGCAGCTTGGCTAGAGCCGGGGACAACGTCGCC GTTGGTTTGCACGGGGTGGACCCTGGCCACATCGCGGCAGGCGGAGTTCTCTGCCATCCA GATTTCCCGGTGCGCGTGGCGTGTCACCTGGAGCTGAAAATTCTGGTTCTGGAAATCACC GTGCCAATACTGGTTGGCCTTGAGTTTGAGCTGCACATACGGCACGCCAAGTCGTCCGCG AGGCTGGTGAGAATACTGTCGTCCCTGGACCAGAAGACCGGCAGGGCCCTGAAGAAAGCG CCGCGTCTGCTCACCGCGAGGCAGGCGGCCCTGGTCGAGGTGAGGCTGGACAGAGAAGCG TGCGTGGAGGAATTCTCGACGCTGAAGGCGCTCGCGCGGGTGTTCCTGCGGTCGCAGGGT AGCACGGTTGCGGTGGGCGTGGTGACTCGAGTCCTGGACCGGGCTTTGGACATGGGCTAG CTGCATTGGCACGGGCGCGGATAATTTATGAACGTCACGCGCGCGGGGGGAGGCAGGTAG GTCGGTCTCCTGGATTAATGGCACCCGGGACCGGGAGGGAGAGAGAGAGGGCCTTTCGGC GCCCAACGAACGATTCAAAGGCGGCCGACACGAGTTTCGTCCACGCACCCCCACGGTTCA AAGGGAGGATCCGCCCGGGACGGACGGGTCAAAGGCCCGCGACTGCAATGAATTCAATGA ATCTGGGGCTGTAAGCCGGCCGTTGGCTTGTT